mRNA_P-wetherbeei_contig118.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A835Z2T2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T2_9STRA) HSP 1 Score: 182 bits (462), Expect = 6.170e-50 Identity = 158/353 (44.76%), Postives = 185/353 (52.41%), Query Frame = 1 Query: 217 HCRQ---TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRF--------------RCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALA---------------------------VQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFVEPFLLTVKALLQV------APRPADAA-LYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLAGNAAAAAEAVRWPDDG 1122 +C Q TDFDLTGQ++WPIS YM W V + + FAGKRVVELGAGCGLSGLVASQ+AAATALTDG+DVVL LL R+ QR R CG G XXXXXXXXX ++A K+E+ XXXXXXXXXX GA A V L+WGD +L+ L AFGPP+VLLGADVVCWPAF+ PFLLTV LLQ A R A AA LYLGYVCRA S T A LGL + + + +A E P ++ KL+A RVTL G++ AA E WP+ G Sbjct: 36 YCSQAASTDFDLTGQIVWPISEYMAWLVRLSPAAFAGKRVVELGAGCGLSGLVASQYAAATALTDGSDVVLDLLRRSVALQRERAGSAARSEGRCVCATACGDLSTGCCXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGSSACLQCVCKAESHXXXXXXXXXXXXXXXXXACGNGGGACACATDDANSGSVGSPQEGRGSERCGELHVASLLWGDRRALDEFLEAFGPPDVLLGADVVCWPAFITPFLLTVNGLLQTVKGLLQASRDARAAALYLGYVCRATSTTDALMARAAALGLDIAPMPMPDNPYDA--EGRGPASIIAELKLQAFRVTL---GSSPAALEPPPWPEPG 383
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A7S1U585_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U585_9STRA) HSP 1 Score: 162 bits (409), Expect = 4.520e-43 Identity = 120/330 (36.36%), Postives = 153/330 (46.36%), Query Frame = 1 Query: 178 TNLPRSRVHPWTPHCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFV---------------------------EPFLLTVKALLQVA----PRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLA 1074 T L R + + TD+DLTGQV+WP+S+++ +++ARN LFAG+RV ELGAGCGLSGLVASQFAA T LTDG DVV+RLLERNA Q+ LA P S AE ++V +L+WG TSLE L FG PEVL+GADVVCWP +V +P + T K L+Q+ P L+LGYV RA + R F A +E GLRV V F+P PE+V ++ +L+ L VT D A Sbjct: 37 TPLREIRQDLYLSNAASTDWDLTGQVVWPVSIFLSYYIARNLELFAGRRVAELGAGCGLSGLVASQFAAGTCLTDGVDVVVRLLERNAALQKES---------------GTLARP------------------------------SGPDAE-----------------------ISVAQLLWGSETSLEAFLETFGVPEVLIGADVVCWPQYVSLNLXXXXXXXXXXXXXXWLRPNPEQVKPLVQTTKRLMQLRHAADPEGPPLVLHLGYVVRALNNHRLFVNACSEAGLRVAEVPDTAFVPHPR-----PEHVASNNELQLLTVTFDAA 293
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: W7TUH9_9STRA (Methyltransferase-like protein 21a-like isoform 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUH9_9STRA) HSP 1 Score: 151 bits (381), Expect = 9.550e-39 Identity = 100/288 (34.72%), Postives = 141/288 (48.96%), Query Frame = 1 Query: 208 WTPHCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGC-GLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068 W TD D TG+++WPIS+++ WFVA R LF ++V+ELGAGC GL GL+AS+FA +TDGN +VL L+RN RG FR D V + + G + +N +A G L + L+WGD S+E + P++LLGAD+VCW FV P L TVK L AP A L+LG+V RA S R + A G+ V+ V ETF+P + + P ++T+ +L+ L ++LD Sbjct: 41 WVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYGQSTYDCSVGVGDEKALNNNSSAVAVSRDALTSC----------------WHEKGKLETRTLLWGDKESVEAVVNEGWRPQILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMP--IEKRCWPSELQTAQELEVLSISLD 310
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A1V9ZIT3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIT3_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.690e-38 Identity = 108/298 (36.24%), Postives = 136/298 (45.64%), Query Frame = 1 Query: 229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLAGNAAAAAEAVRWPDD 1119 TD DLTGQV+WP+S+ + WFVA NR LF GK V+E+GAG GL+G VA+QFAA TA+TDGNDVVLRLL RN E ++A A V +L+WG+ S AF P +++LGADVVCWP V P L T+K L+ AP A Y G+VCRA + A +G R+ V +TFLP PENV + +L L LD A + AA E V + DD Sbjct: 45 TDHDLTGQVVWPVSILLSWFVASNRDLFRGKTVLEVGAGAGLAGFVAAQFAAHTAITDGNDVVLRLLRRNVE-------------------------------------------------------HTDANA-------------------------GVYKLLWGEEASAVEFTEAFPHPVDIVLGADVVCWPNLVLPLLRTIKHLMHRAPDMFSTAFYCGFVCRATNTRDLLFAQAKAMGFRMWTVDHDTFLPTPR-----PENVFSVKELFLLGFQLDPA--SPAATEPVAFVDD 255
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: G4Z339_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z339_PHYSP) HSP 1 Score: 145 bits (367), Expect = 2.210e-37 Identity = 103/285 (36.14%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 217 HCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068 H TD DLTGQV+WP+S ++ W++ +R AGK VVELGAG GLSGLVASQFAA TALTDGND+VL LLE NAEA A+ + V AL L+WGD S+E AF P +VL+GADVVCWP V+P L T+K LL + P + G+VCRA S A G R E V + FLP P +V ++ +L+ + +LD Sbjct: 46 HAASTDHDLTGQVVWPVSAFLAWYLVTHREEIAGKTVVELGAGAGLSGLVASQFAAHTALTDGNDIVLELLEENAEAN------------ADSSKVQAL------------------------------------------------------------------PLLWGDHESVEAFERAFPHPVDVLIGADVVCWPILVKPILQTIKYLLLRSRNPLETKFCCGFVCRAQSTEDLLFKEAVAFGFRFERVRDDDFLPTPR-----PADVTSNRELQLIVFSLD 247
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: W4GX02_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX02_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.520e-37 Identity = 100/281 (35.59%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068 TD DLTGQV+WP+S+ + WFVA NR+LF K V+ELGAG GL+G VASQFA+ TA+TDGNDVVLRLL++NA+ + CG V +L+WG+ S+ + F P +VLLGADVVCWP V P L T+K L+ + RP D Y G+VCRA S F A +G ++ +V FLP P NV ++ +L L ++LD Sbjct: 45 TDHDLTGQVVWPVSILLSWFVAANRALFQDKVVLELGAGAGLAGFVASQFASRTAITDGNDVVLRLLDQNAD--QASTPCG------------------------------------------------------------------------------VFKLLWGEEDSVVQFQKDFPHPIDVLLGADVVCWPNLVLPLLRTIKHLMHQSERPFDVVFYCGFVCRAQSTQDLFFAQAKGMGFKLWSVPHGDFLPTPR-----PVNVTSTLELNLLGLSLD 240
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A6G0X1R3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1R3_9STRA) HSP 1 Score: 144 bits (364), Expect = 4.790e-37 Identity = 96/281 (34.16%), Postives = 130/281 (46.26%), Query Frame = 1 Query: 229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068 TD DLTGQV+WP+S+ + WFVA R LF + V+ELGAG GL+G VASQFA TA+TDGNDVVLRLL++NA+ CG V +L+WG+A S+E+ F P +++LGADVVCWP V P L T+K L+ A P Y G+VCRA + F A E+G ++ V + FLP P+NV ++ +L + ++LD Sbjct: 44 TDHDLTGQVVWPVSILLSWFVASKRDLFRDRTVLELGAGAGLAGFVASQFATRTAITDGNDVVLRLLDQNAD--EASTPCG------------------------------------------------------------------------------VFKLLWGEAASVEQFQKDFPHPIDIMLGADVVCWPNLVLPLLRTIKHLMYAAANPFSVVFYCGFVCRAQNTQDLFFQRAKEMGFKLWKVDHDEFLPTPR-----PDNVTSARELMLIGLSLD 239
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A7R9UCZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCZ9_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.370e-37 Identity = 91/248 (36.69%), Postives = 126/248 (50.81%), Query Frame = 1 Query: 229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPPEVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAA----LYLGYVCRAASVTRQFHTAATELGLRV 960 TD+DLTGQV+WP+S+++G+++A+NR LF G++V ELGAGCGLSGLVAS FA+ T LTDG +VV+RLLE+NA+ QR R SE A ++ V L WG + L+ + FG P+VL+GAD+VCWP +V P + T+K L+Q+ ++A L+LGYVCRA + R F +E G V Sbjct: 77 TDWDLTGQVLWPVSIFLGYYIAKNRQLFEGQKVAELGAGCGLSGLVASHFASQTCLTDGEEVVVRLLEKNAQLQREGKALQRG---------------------------------------------SEEQA-----------------------SIGVACLRWGCQSDLDAFVDQFGVPDVLVGADIVCWPQYVRPLVQTLKRLMQLRFAEEESAEPLKLHLGYVCRALNNHRLFLDECSEYGFWV 256
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: A0A485KPX6_9STRA (Aste57867_10238 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPX6_9STRA) HSP 1 Score: 144 bits (362), Expect = 9.630e-37 Identity = 100/287 (34.84%), Postives = 130/287 (45.30%), Query Frame = 1 Query: 229 TDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFGPP-EVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLDLAGNAA 1086 TD DLTGQV+WP+S+ + WFVA R LF GK V+ELGAG GL+G VASQFA TA+TDGNDVVLRLL++NA+ + CG +L+WG+ S+ + F P +V+LGADVVCWP V P L T+K L+ P + Y G+VCRA + F A +G ++ V + FLP PENV + +LK L + LD A AA Sbjct: 45 TDHDLTGQVVWPVSILLSWFVASKRDLFRGKTVLELGAGAGLAGFVASQFAKRTAITDGNDVVLRLLDQNAD--QASTPCG------------------------------------------------------------------------------TFKLLWGEEDSVGQFEKDFPYPIDVMLGADVVCWPNLVLPLLRTIKHLMHKTHAPLNVVFYCGFVCRAKNTQDLFFAQAVAMGFKLWTVDHDEFLPTPR-----PENVTSRLELKLLGLQLDAASPAA 246
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Match: D0NFR1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFR1_PHYIT) HSP 1 Score: 142 bits (359), Expect = 3.070e-36 Identity = 97/285 (34.04%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 217 HCRQTDFDLTGQVIWPISVYMGWFVARNRSLFAGKRVVELGAGCGLSGLVASQFAAATALTDGNDVVLRLLERNAEAQRGRFRCGRDGIGAEFAMVAALAEPVAAGAADXXXXXXXXXXVTINAAXXXXXXKSEATAEMPKRTXXXXXXXXXXXXXXXPGALAVQELMWGDATSLERHLAAFG-PPEVLLGADVVCWPAFVEPFLLTVKALLQVAPRPADAALYLGYVCRAASVTRQFHTAATELGLRVEAVGVETFLPEALSEATIPENVRTSCKLKALRVTLD 1068 H TD DLTGQV+WP+S+++ W++ +R+ K VVELGAG GLSGLVASQFAA TALTDGND+VL LLE NAE A+ + V AL L+WG+ S+E AF P ++L+GADV+CWP V+P L T+K LL + +P + G+VCRA S + A G E + +TFLP P V ++ +L+ + TLD Sbjct: 44 HAASTDHDLTGQVVWPVSIFLAWYLVAHRNEIVCKNVVELGAGAGLSGLVASQFAAHTALTDGNDIVLELLEENAETN------------ADSSKVKAL------------------------------------------------------------------PLLWGERQSVEAFEQAFPFPIDILIGADVICWPILVKPILQTIKYLLLRSRKPLETKFCCGFVCRAQSTEKLLFQEALAFGFHFERISEDTFLPTPR-----PSEVISNRELQLIVFTLD 245 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig118.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig118.5.1 >prot_P-wetherbeei_contig118.5.1 ID=prot_P-wetherbeei_contig118.5.1|Name=mRNA_P-wetherbeei_contig118.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=347bp MSTPIQSEIFDFNLAFAPSCTNLPRSRVHPWTPHCRQTDFDLTGQVIWPIback to top mRNA from alignment at P-wetherbeei_contig118:10089..11569+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig118.5.1 ID=mRNA_P-wetherbeei_contig118.5.1|Name=mRNA_P-wetherbeei_contig118.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1481bp|location=Sequence derived from alignment at P-wetherbeei_contig118:10089..11569+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig118:10089..11569+ >mRNA_P-wetherbeei_contig118.5.1 ID=mRNA_P-wetherbeei_contig118.5.1|Name=mRNA_P-wetherbeei_contig118.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1041bp|location=Sequence derived from alignment at P-wetherbeei_contig118:10089..11569+ (Phaeothamnion wetherbeei SAG_119_79)back to top |