mRNA_P-wetherbeei_contig11534.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Match: A0A835Z0I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I7_9STRA) HSP 1 Score: 129 bits (325), Expect = 6.040e-31 Identity = 79/231 (34.20%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 37 WLQDIVLTILTTFGGALVAPTIVGEPPAIFVNELLLPAFLTAWFLIVHMGDTRLTRFLSSPWVKRILTTAAAASTANSICSLTDKGAKKFTKGSILYPTAFFGPWLVGVVRGSAAAFLPLDKGLGALGGGVPFSMQLAAFSAALYQLTANDPYVIGGVVRGMLMPLVGAFGAAIVAPLNVRLIIITLYMTTTFIRSFDSYKDFNVFAPVHHIIYAVTGIPPSGKANGVAAA 729 W Q +VLT L FGG +VAP ++G+PP I +N+LL+ A L +W L+V+ + + L +P + + L A AN C + K+ G YP F+GP L+G + G A FLP DKGL ++ GG P+ +Q A + + + L A+DP+V R L P G + A R ++ + ++++ FN F+P+H + YA++G+ G ANG AA Sbjct: 47 WAQSLVLTFLMCFGGGIVAPFLLGKPPVILINDLLVVAVLGSW-LVVNRLEEPVGALLRAPVISQALAFMAEVFRANGFCRMVQVAFKEIPAGKY-YPIPFWGPVLLGTIAGCAGMFLPFDKGLASIKGGSPWPLQSAFYGSLAFHLLAHDPHV-----RAALAPYAGDYTAD-----AARACVVAFFAAVATLQTYAG-PHFNPFSPLHRVAYAISGVKAPG-ANGAPAA 263
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI) HSP 1 Score: 113 bits (283), Expect = 6.440e-25 Identity = 72/232 (31.03%), Postives = 120/232 (51.72%), Query Frame = 1 Query: 10 DRNKRQKLPWLQDIVLTILTTFGGALVAPTIVGEPPAIFVNELLLPAFLTAWFLIVHMGDTRLTRFLSSPWVKRILTTAAAASTANSICSLTDKGAKKFTKGSILYPTAFFGPWLVGVVRGSAAAFLPLDKGLGALGGGVPFSMQLAAFSAALYQLTANDPYVIGGVVRGMLMPLVGAF---GAAIVAPLNVRLIIITLYMTTTFIRSFDSYKDFNVFAPVHHIIYAVTGIP 696 +++ +++ W + +V+T + FGG ++AP ++G+PP +FVN+L++P WF + + + + +++P +K+++ + ANS+C + K YP A +GP L+G V G FLPLDKGL L G P+ +Q A + + + L DP V + + L G G AIVA L ++ L T FN F PVH+++Y VTG+P Sbjct: 63 EKDSGKQMFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWF-VSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLS-NSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNVGPYLRDAAALFLDGDLVVQGRAIVAGF---LCVVALAQTLIS-------PAFNPFTPVHNVVYTVTGVP 282
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Match: A0A7S2UUA1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUA1_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.270e-23 Identity = 107/380 (28.16%), Postives = 160/380 (42.11%), Query Frame = 1 Query: 37 WLQDIVLTILTTFGGALVAPTIVGEPPAIFVNELLLPAFLTAWFLIVHMGDTRLTRFLSSPWVKRILTTAAAASTANSICSLTDKGAKKFTKGSILYPTAFFGPWLVGVVRGSAAAFLPLDKGLGALGGGVPFSMQLAAFSAALYQLTANDPYVIGGVVRGMLMPLVGAFGAAIVAP-LNVRLI--IITLYMTTTFIRSFDSYKDF-NVFAPVHHIIYAVTGIPPSGKANGVAAAAAAVPAVPPAAELAARHKKERAFDILRYGAVMAVVASVAVGRSLPADTLAVGGTLKPGEFLGTCTLLPAWRGCQPYVATLGVDGALAVFRGKSP---DDPHRVLQWSSP----APRKASADVHATLAADG-RIAVVSEGKAVWQS 1140 WL +VL I +G + P ++GEPP F N+ + + +WFL H + +F S + ++ A N +C D F + S YPT P ++GV+ + F PLDKGL + VP+++Q+ F A YQL D IG AF +V P LN I+T+ T T + F S F N FAPV V + S G+ ++R G + + + A + LP + L G T+ G++L TCT+LPA R C +V +L G L VF+ +P D + WSS KA T+ G R+ V +G +W++ Sbjct: 49 WLHSLVLYIFEAYGAHTLIPLVLGEPPEYFENDFVGFVGIASWFLTQHSPFNIVPKFFSFAPCEYAMSMMALIFLGNVLCQTVDVCNHHF-EASPYYPTPMVAPIVLGVMSVTVDQFFPLDKGLEPISKCVPWNIQIGTFCAVFYQLAIWDDGPIGE-----------AFELYVVGPTLNKETATWIVTVLFTITGLYEFKSGDKFKNPFAPV------VNSVKASSLNEGLGV-------------------------VMRVGFAITALTAFAY-QQLPNEELQSGQTMASGDWLTTCTVLPALRPCNAHVLSLNSTGYLNVFQASTPPKKDKGAKKAIWSSDKSASTASKAPGTGPYTVELSGPRLTVKDDGIVIWEN 384
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Match: R1E2E7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E2E7_EMIHU) HSP 1 Score: 74.3 bits (181), Expect = 2.680e-11 Identity = 55/175 (31.43%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 1 AAADRNKRQKLP---WLQDIVLTILTTFGGALVAPTIVGEPPAIFVNELLLPAFLTAWFLIVHMGDTRLTRFLSSPWVKRILTTAAAASTAN--SICS-LTDKGAKKFTKGSIL--YPTAFFGPWLVGVVRGSAAAFLPLDKGLGALGGG-VPFSMQLAAFSAALYQLTANDPYV 498 AA RN ++ LP W I L +LT+FGG ++ P ++G P A +NE L+P + AW + ++ L SP+ + + + +ICS L K + G + A GP L G++ G AF+PL GL AL G +P+ +Q +A +A + L +D V Sbjct: 41 AACCRNLKEALPRLTWFYAIPLAVLTSFGGGIMVPVLLGLPAAPLINEALIPTMIIAWACVQYLHPVL--ALLQSPFGRAASNSGFEVFRYHVLAICSDLASKTLPPVSTGPLAGTLSCALVGPLLCGMIGGCGGAFMPLSNGLKALEGSTIPWRVQSSAVMSAWHHLLTHDAAV 213
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Match: A0A7R9U3G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3G1_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.020e-10 Identity = 47/152 (30.92%), Postives = 76/152 (50.00%), Query Frame = 1 Query: 37 WLQDIVLTILTTFGGALVAPTIVGEPPAIFVNELLLPAFLTAWFLIVHMGDTRLTRFLSSPWVKRI-LTTAAAASTANSICSLTDKGAKKFTKGSILYPTAFFGPWLVGVVRGSAAAFLPLDKGLGALGGGVPFSMQLAAFSAALYQLTAND 489 W++ ++ T LT FGG + P I+G+PP +++L L AW L H+ T + R++ R+ L A CS + AK + S LYP GP ++GV+ + FLP DKGL A+ G+ + ++ +A + + ND Sbjct: 59 WVESLIRTFLTAFGGGTLVPLILGKPPVFLDSDVLFCMTLLAWAL-THL--TPVGRWVEYNQALRLPLNLGGYIFKAVKCCSTVNTAAKVLS-ASALYPIPLMGPIVLGVLGSTGGMFLPFDKGLAAVSKGLSVAFEIPLACSAFFHIIVND 206
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Match: A0A7S2SKA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.800e-9 Identity = 60/231 (25.97%), Postives = 102/231 (44.16%), Query Frame = 1 Query: 10 DRNKRQKLPWLQDIVLTILTTFGGALVAPTIVGEPPAIFVNELLLPAFLTAWFLIVHMGDTRLTRFLSSPWVKR----ILTTAAAASTANSICSLTDKGAKKFTKGSILYPTAFFGPWLVGVVRGSAAAFLPLDKGLGALGGGVPFSMQLAAFSAALYQLTANDPYVIGGVVRGMLMPLVGAFGAAIVAPLNVRLIIITLYMTTTFIRSFDSYKDFNVFAPVHHIIYAVTG 690 +R + ++ WL +V T + +GG ++ P ++G P N+ + L +W+ + +T L + V R + A + C + A S+ YP +GP L G + G F+ G+G + V + +Q + ++AA Y +T NDP V G + G L + G+ PL R+ I ++ FN FAPVHH++Y +TG Sbjct: 90 ERVQAERYFWLNSLVRTAIACYGGGIIVPMMLGMKPFPIENDAAITLVLFSWWTLHGTPAPLVTWVLDNSTVLRCFLFFIFEALRCNVVVKWCII----ANSMLAPSVHYPIPIWGPILCGGISGCFGGFIL--GGVGLVQSEVSWLIQSSFYAAAYYHITVNDPIV--GPILGKLH--ISGAGSD---PLVARMTCIFALGAVAVLQEAFFGAHFNPFAPVHHLLYKITG 307
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Match: A0A7S4DDZ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDZ0_HETAK) HSP 1 Score: 58.9 bits (141), Expect = 4.280e-6 Identity = 36/117 (30.77%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 343 GPWLVGVVRGSAAAFLPLDKGLGALGGGVPFSMQLAAFSAALYQLTANDPYVIGGVVRGMLMPLVGAFGAAIVAPLNVRLIIITLYMTTTFIRS-FDSYKDFNVFAPVHHIIYAVTG 690 GP L+G++ S+ F+P+ KGL + VP+++Q SA Y + D YV+G VR ++ + L R ++I ++ + + + S+ N FAPVH ++Y VTG Sbjct: 3 GPVLIGIIATSSGNFIPISKGLKQIEKAVPWNIQCGIISAIFYHVAIFDDYVVGATVRNYIV-------GHQLDRLTARFLVIAFFVVMGQVHTRYGSHV--NPFAPVHKVLYRVTG 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11534.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11534.1.1 >prot_P-wetherbeei_contig11534.1.1 ID=prot_P-wetherbeei_contig11534.1.1|Name=mRNA_P-wetherbeei_contig11534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=422bp AAADRNKRQKLPWLQDIVLTILTTFGGALVAPTIVGEPPAIFVNELLLPAback to top mRNA from alignment at P-wetherbeei_contig11534:20..1285+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11534.1.1 ID=mRNA_P-wetherbeei_contig11534.1.1|Name=mRNA_P-wetherbeei_contig11534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1266bp|location=Sequence derived from alignment at P-wetherbeei_contig11534:20..1285+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11534:20..1285+ >mRNA_P-wetherbeei_contig11534.1.1 ID=mRNA_P-wetherbeei_contig11534.1.1|Name=mRNA_P-wetherbeei_contig11534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1266bp|location=Sequence derived from alignment at P-wetherbeei_contig11534:20..1285+ (Phaeothamnion wetherbeei SAG_119_79)back to top |