mRNA_P-wetherbeei_contig11261.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A7Z9UEA7_9BACT (50S ribosomal protein L15 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UEA7_9BACT) HSP 1 Score: 173 bits (439), Expect = 2.600e-53 Identity = 89/130 (68.46%), Postives = 106/130 (81.54%), Query Frame = 1
Query: 10 RKRVARGGSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVEVI 399
R+RV RGG G GRG+ GQ SRSGG+K PGFEGGQTPWYRRLP YRGFKNPFRT+YQEV LS LE F+ +T+NPE+L+EK ++N+ +PIK+LGNG LTK LTV+LH T+SAKAA+E AGGK EVI
Sbjct: 16 RRRVCRGGKLGKTGGRGYNGQKSRSGGTKYPGFEGGQTPWYRRLPKYRGFKNPFRTEYQEVSLSDLETFDAKSTVNPESLLEKGFVKNIRQPIKVLGNGELTKNLTVNLHGFTASAKAAIEGAGGKAEVI 145
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A7X9AG43_9BURK (50S ribosomal protein L15 n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AG43_9BURK) HSP 1 Score: 168 bits (426), Expect = 2.550e-51 Identity = 89/131 (67.94%), Postives = 109/131 (83.21%), Query Frame = 1
Query: 10 RKRVARG-GSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVEVI 399
RKRV RG GS+ +GRG KGQ SRSGG+KGPGFEGGQTPWYRRLP +RGFKNPFRT Y EV L LE FE+G T+ PE L E+ +++NLN+P+K+LGNG+L++KLTV LHA T++A+AA+E AGGKVEVI
Sbjct: 16 RKRVGRGHGSQVKTAGRGQKGQSSRSGGTKGPGFEGGQTPWYRRLPKFRGFKNPFRTVYAEVALGSLEVFEDGQTVTPELLRERGLIKNLNRPVKVLGNGTLSRKLTVALHAFTATARAAIEEAGGKVEVI 146
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A355TRM1_9BACT (50S ribosomal protein L15 n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRM1_9BACT) HSP 1 Score: 150 bits (380), Expect = 2.590e-44 Identity = 82/135 (60.74%), Postives = 101/135 (74.81%), Query Frame = 1
Query: 1 RKARKRVARGGSRGA--QSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVEVI 399
R++RKRVARG G+ +GRG GQGSRSGG K PGFEGGQTPWYRRLP +RGFKNPFR + E+ + LE F +G T++P L+ +++NLN PIK+LGNGSLTKKLTV LHA T+S+K A+ GG VE I
Sbjct: 13 RRSRKRVARGHGCGSVKTAGRGSNGQGSRSGGLKAPGFEGGQTPWYRRLPKFRGFKNPFRVIFTEISVGSLERFNDGDTVDPLALLSVGLVKNLNNPIKVLGNGSLTKKLTVQLHAFTASSKEAITKVGGTVEEI 147
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: UPI001924F6DE (50S ribosomal protein L15 n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001924F6DE) HSP 1 Score: 126 bits (317), Expect = 3.340e-35 Identity = 62/95 (65.26%), Postives = 77/95 (81.05%), Query Frame = 1
Query: 16 RVARGGSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLG 300
RV RGG G GRG+ GQ SRSGG+KGPGFEGGQTPW+RRLP YRGFKNPFRT+YQEV LS LE F+ +T++ +TL EK +++NL+ P+K+LG
Sbjct: 18 RVCRGGKHGKTGGRGYNGQNSRSGGTKGPGFEGGQTPWHRRLPKYRGFKNPFRTEYQEVSLSSLEAFDAKSTVDVQTLKEKGIVKNLHLPVKVLG 112
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A2E9A3E3_9CHLR (50S ribosomal protein L15 n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E9A3E3_9CHLR) HSP 1 Score: 126 bits (316), Expect = 1.340e-34 Identity = 73/132 (55.30%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 4 KARKRVARGGSRG--AQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVE 393
KARKRV RG + G + SGRG KGQ SRSGG PGFEGGQ P +RRLP RGF N FRTDY V + LE FENG I PE L++ +++ IK+LG+G L+K L VH H + SAK +E+AGGK+E
Sbjct: 13 KARKRVGRGDASGYGSYSGRGIKGQNSRSGGGVRPGFEGGQLPLFRRLPRIRGFTNIFRTDYSVVNVEHLETFENGTDITPELLVQVGLVKKEKSLIKILGSGELSKSLNVHAHKFSGSAKNKIESAGGKIE 144
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A3S9T2I1_9FIRM (50S ribosomal protein L15 n=1 Tax=Anoxybacter fermentans TaxID=1323375 RepID=A0A3S9T2I1_9FIRM) HSP 1 Score: 125 bits (314), Expect = 2.470e-34 Identity = 75/133 (56.39%), Postives = 88/133 (66.17%), Query Frame = 1
Query: 1 RKARKRVARGGSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVEVI 399
RKARKRV RGG RG SGRG KGQ +RSGG PGFEGGQTP +RRLP RGF N +RT Y EV + L F+ G + PE L+E V+ L +K+LG+G LTK LTV H + SA +E AGGK EVI
Sbjct: 13 RKARKRVGRGGKRGYTSGRGSKGQNARSGGGVRPGFEGGQTPLFRRLPK-RGFNNIWRTRYAEVNVRSLNRFDAGTEVTPELLLETGVISKLYDGVKVLGDGELTKPLTVKAHRFSKSAIEKIEGAGGKAEVI 144
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A389M522_9FIRM (50S ribosomal protein L15 n=1 Tax=Erysipelotrichaceae bacterium TaxID=2049044 RepID=A0A389M522_9FIRM) HSP 1 Score: 125 bits (314), Expect = 2.620e-34 Identity = 73/133 (54.89%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 1 RKARKRVARGGSRGA--QSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVE 393
R+ RKRV RG + G +GRGHKGQ +RSGG PGFEGGQTP +RR+P RGF N FR ++ V L L FE+G + PE LIEK+++R L +K+LGNG LTKKLTV H + SAK A++ AGG VE
Sbjct: 13 RRPRKRVGRGPASGTGKTAGRGHKGQNARSGGGVRPGFEGGQTPLFRRIPK-RGFTNIFRKEFAIVNLETLNVFEDGTIVTPELLIEKRIVRKLESGVKILGNGELTKKLTVKAHKFSDSAKTAIQKAGGTVE 144
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A7C3JSZ8_9DELT (50S ribosomal protein L15 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JSZ8_9DELT) HSP 1 Score: 125 bits (314), Expect = 2.950e-34 Identity = 75/134 (55.97%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 4 KARKRVARG--GSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVEVI 399
K RKRV RG G +GRGHKGQG+RSGG+ PGFEGGQ P RRLP RGF NPFR V L QLE FE G + PE L EK ++R ++ +K+LG+GSLTK LTV H + +AKA +EAAGG+ EV+
Sbjct: 14 KERKRVGRGDGSGHGKTAGRGHKGQGARSGGNVAPGFEGGQMPLQRRLPK-RGFHNPFRVAVAVVNLKQLETFEAGTEVTPEMLAEKGLVRRRDRLVKVLGDGSLTKALTVKAHRFSDAAKAKIEAAGGEAEVL 146
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A1B1YZH5_9BACI (50S ribosomal protein L15 n=10 Tax=Fictibacillus TaxID=1329200 RepID=A0A1B1YZH5_9BACI) HSP 1 Score: 124 bits (311), Expect = 7.460e-34 Identity = 78/135 (57.78%), Postives = 86/135 (63.70%), Query Frame = 1
Query: 1 RKARKRVARG--GSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVEVI 399
RK R RV RG G SGRGHKGQ SRSGG PGFEGGQ P RRLP RGF NP R +Y V L +L FE G + PE L+E V+ NL IK+LGNG L KLTV H + SAK A+EAAGGK EVI
Sbjct: 13 RKVRNRVGRGIGSGNGKTSGRGHKGQNSRSGGGVRPGFEGGQNPLARRLPK-RGFTNPTRKEYAVVNLEKLVRFEEGTEVTPELLLETGVVSNLKNGIKVLGNGKLEVKLTVKAHKFSVSAKEAIEAAGGKTEVI 146
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Match: A0A6N8CR77_9BACI (50S ribosomal protein L15 n=3 Tax=Terrilactibacillus TaxID=1795633 RepID=A0A6N8CR77_9BACI) HSP 1 Score: 124 bits (311), Expect = 7.460e-34 Identity = 75/135 (55.56%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 1 RKARKRVARG--GSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYRGFKNPFRTDYQEVKLSQLEEFENGATINPETLIEKKVLRNLNKPIKLLGNGSLTKKLTVHLHAATSSAKAAVEAAGGKVEVI 399
R ARKRV RG G SGRG KGQ SRSGG PGFEGGQ P +RLP RGFKNP R +Y V L L +F+ G + PE L++ +V+R LN +K+LG G L KKLTV H ++SAK A+EAAGG +EVI
Sbjct: 13 RHARKRVGRGYGSGLGKTSGRGQKGQKSRSGGGVRPGFEGGQMPLIQRLPK-RGFKNPTRKEYSLVNLETLSKFDEGTEVTPELLLQNRVIRKLNDGVKVLGQGQLDKKLTVKAHKFSASAKEAIEAAGGNIEVI 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11261.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11261.1.1 >prot_P-wetherbeei_contig11261.1.1 ID=prot_P-wetherbeei_contig11261.1.1|Name=mRNA_P-wetherbeei_contig11261.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp RKARKRVARGGSRGAQSGRGHKGQGSRSGGSKGPGFEGGQTPWYRRLPHYback to top mRNA from alignment at P-wetherbeei_contig11261:3..404+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11261.1.1 ID=mRNA_P-wetherbeei_contig11261.1.1|Name=mRNA_P-wetherbeei_contig11261.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig11261:3..404+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11261:3..404+ >mRNA_P-wetherbeei_contig11261.1.1 ID=mRNA_P-wetherbeei_contig11261.1.1|Name=mRNA_P-wetherbeei_contig11261.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig11261:3..404+ (Phaeothamnion wetherbeei SAG_119_79)back to top |