mRNA_P-wetherbeei_contig11257.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A3C0TWM9_9PROT (HTH marR-type domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TWM9_9PROT) HSP 1 Score: 185 bits (469), Expect = 5.620e-57 Identity = 95/155 (61.29%), Postives = 118/155 (76.13%), Query Frame = 1
Query: 1 MTNVTTKPPVDPLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNM 465
MT T P P +F+++RE+ WL++D +R++ RSIER VR G+ QWRVLVQ+AR++GQTQS LAEE EIAPAPLGRLLDRLE QK IERR D SDRR KR+Y EQ FF+RLRQLA+ FE VY+S+++ DL ELQRLLQK+K+NM
Sbjct: 1 MTESTLSFPPPPNDPSFEMRREIAWLIFDTARMMTRSIERHVRSTGVNSNQWRVLVQIARQNGQTQSHLAEEVEIAPAPLGRLLDRLEKQKFIERRPDPSDRRVKRVYFTGKEQAQFFDRLRQLALANFEKVYRSLDDKDLRELQRLLQKIKTNM 155
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A351T5X4_9PROT (HTH marR-type domain-containing protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T5X4_9PROT) HSP 1 Score: 169 bits (429), Expect = 5.020e-51 Identity = 89/148 (60.14%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 43 DAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNML---QDG 477
D F+LQR+VGWL++D SRLLMRS E++VR+ G+TP QWRVL+Q+ R +GQTQ+E+AEETEIA APLGRLLD+LE+Q +IERR D DRRAKRIYL + E F E RQ A QF+TVY + +++LLEL R+L +K+N+ QDG
Sbjct: 2 DRFELQRDVGWLIFDVSRLLMRSFEKKVREVGLTPHQWRVLLQIGRREGQTQTEIAEETEIARAPLGRLLDKLEEQGVIERRQDPHDRRAKRIYLVEREGKTFMEPFRQQAKEQFDTVYGKLADSELLELIRMLDHIKANIQSAEQDG 149
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A518RBJ9_9SPHN (MarR family transcriptional regulator n=1 Tax=Sphingomonas suaedae TaxID=2599297 RepID=A0A518RBJ9_9SPHN) HSP 1 Score: 97.8 bits (242), Expect = 6.200e-23 Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 55 LQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNML 468
+ +G+LV D +RLL R + R+ G+T QWR L LAR +G Q LAE E+ P L R+LDRLED ++ERR D +DRRA RI+L D Q +LR +A E ++EAD +++R L ++++N++
Sbjct: 1 MNEPLGFLVADLARLLRRDFDLRAREIGVTNAQWRTLKTLARHEGSNQGALAELLEVEPITLARMLDRLEDAGLVERRRDPADRRAWRIHLTDAAQ-PLIGQLRDIADELVEDALAGISEADRAQMRRTLDRVRTNLI 137
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A371BH81_9SPHN (MarR family transcriptional regulator n=1 Tax=Sphingorhabdus pulchriflava TaxID=2292257 RepID=A0A371BH81_9SPHN) HSP 1 Score: 97.1 bits (240), Expect = 1.170e-22 Identity = 57/143 (39.86%), Postives = 84/143 (58.74%), Query Frame = 1
Query: 55 LQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDGTE 483
+ ++G+L+ D +RL+ R+ + VR GIT QWRVL L R G TQ LAE ++ P LGR++DR++D ++ERRAD SDRRA RIYL + E L+ LA F +NEA +L+ +L ++ N+ + E
Sbjct: 1 MSEDLGFLIGDTARLMRRAFDERVRTKGITRPQWRVLGLLNRFGGSTQVALAEMMDVEPITLGRMIDRMQDSGLVERRADPSDRRAWRIYLTPSGESRL-EDLKPLATELFADAVSGLNEAQQADLEAMLDTIRLNLTRKAPE 142
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A7Y8M8X7_9PROT (MarR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8M8X7_9PROT) HSP 1 Score: 95.9 bits (237), Expect = 1.240e-21 Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 1
Query: 16 TKPPVDPLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNM 465
T+ P AD +++ E+GWL++D RLL R+ + + RK G+T QWRV+V L REDG TQ LAE +I AP+GRL+DRLE IERR D D RA+R+Y + L+ A F+ ++ +++AD L R L ++ +
Sbjct: 20 TRRPAPAGADV-EVEFEIGWLMHDVHRLLSRAFDDKFRKLGLTRAQWRVMVHLLREDGLTQKALAEVDQIEKAPMGRLVDRLEQLGWIERRPDPLDGRARRVYRT-AKIDPLLPELKAGAATIFDHMFDGLDDADRGRLHRTLSAMRDRL 167
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A5C9A347_9GAMM (MarR family transcriptional regulator n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C9A347_9GAMM) HSP 1 Score: 93.6 bits (231), Expect = 2.620e-21 Identity = 55/141 (39.01%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 52 DLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQD 474
D + ++ + ++ A+RLL R+ +R R+ G+T +W+VL LAR++G Q+ELAE ++AP L R LD LE + ++ERR D SDRR RIYL + Q A LR+LA E + ++ ++ +LQ+LL +++ N+ +D
Sbjct: 5 DSEAQMSFELHSAARLLRRNFDRRAREHGLTRSRWQVLWHLARQEGLKQAELAENMDVAPISLTRQLDNLEQEGLVERRRDDSDRRCFRIYLTEAAQPALTV-LRELAQATREQALEGLSAREVDQLQKLLGRVRQNLSRD 144
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: UPI000EAA78B8 (MarR family transcriptional regulator n=1 Tax=Tsuneonella amylolytica TaxID=2338327 RepID=UPI000EAA78B8) HSP 1 Score: 93.2 bits (230), Expect = 3.800e-21 Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 67 VGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDGTEPL 489
+G L+ D+SRLL R + VR G+T QW+VL L R +G Q LAE+ ++ P + R++DRL+D ++ERRAD +DRR+ R++L + A ++LR +A FE + EAD LQ +L++++ N+ + E L
Sbjct: 4 IGSLLGDSSRLLRREFDARVRDIGVTWPQWQVLTTLRRHEGINQGGLAEQLDVEPITVCRMVDRLQDAALVERRADPADRRSWRLFLTPRAE-ALLDQLRPIAERLFEEALDGIAEADRAALQAMLERIRDNLSRRDAEGL 143
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A2S7K171_9PROT (MarR family transcriptional regulator n=1 Tax=Marinicaulis flavus TaxID=2058213 RepID=A0A2S7K171_9PROT) HSP 1 Score: 93.6 bits (231), Expect = 5.480e-21 Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 55 LQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDGTEPL 489
L+R G+LV+D +RLL R +R V+ G+T QW VL L R DG+TQ LA+E ++ PAPLGRL+DRLE+ + R +DRRA ++L D + E +R A + ++ +K ++ ++ + L KSN+ EP+
Sbjct: 8 LERNPGYLVHDVARLLRREFDRRVKHLGLTRAQWFVLAHLYRNDGRTQRALADELDMEPAPLGRLIDRLEESGWVRRAPSAADRRANLVHLTD-KIIPLIEEMRAAANNLYKDAFKGMSNKNVEDFVEALTIAKSNLNDLSAEPV 151
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A2G2GJN8_9PROT (MarR family transcriptional regulator n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GJN8_9PROT) HSP 1 Score: 92.8 bits (229), Expect = 6.440e-21 Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 61 REVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNM 465
R G+LV+D +RLL R+ ++ VR+ G+T QW VL L R DGQTQ ELA++ ++ PAP+GRL+DRLE+ + R AD DRR KR++L+ + E +R+ A + + V+ D +L+ K N+
Sbjct: 10 RNPGFLVHDLARLLRRTFDQRVRQIGLTRAQWFVLAHLYRTDGQTQRELADDLDMEPAPIGRLIDRLEESGWLRREADARDRRVKRVFLS-AKILPHMEEMRETAKGVYADAFFGVSSQDFETFVDVLEAAKFNL 143
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A255Y8J0_9SPHN (Transcriptional regulator n=1 Tax=Sandarakinorhabdus cyanobacteriorum TaxID=1981098 RepID=A0A255Y8J0_9SPHN) HSP 1 Score: 92.4 bits (228), Expect = 9.320e-21 Identity = 55/148 (37.16%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 34 PLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDG 477
P A F + +G LV DA+RLL R + R G++ QW+VL+ LAR +G +Q+ LAE E+ +GR++DRLE+ ++ERR D +DRRA +++L + L+ +A + ++EA+ EL RLL +L++N+L++G
Sbjct: 9 PPAGRFAVADTIGVLVSDAARLLRRRFDARARAIGVSRAQWQVLIALARSEGSSQAALAERLEVETITVGRMVDRLEEAGLVERRPDPADRRAWQLFLTARANDLLLD-LQPVADAVRAEMLAGLSEAEQAELHRLLSRLRANLLREG 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11257.3.1 >prot_P-wetherbeei_contig11257.3.1 ID=prot_P-wetherbeei_contig11257.3.1|Name=mRNA_P-wetherbeei_contig11257.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp MTNVTTKPPVDPLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQback to top mRNA from alignment at P-wetherbeei_contig11257:1409..1906+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11257.3.1 ID=mRNA_P-wetherbeei_contig11257.3.1|Name=mRNA_P-wetherbeei_contig11257.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig11257:1409..1906+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11257:1409..1906+ >mRNA_P-wetherbeei_contig11257.3.1 ID=mRNA_P-wetherbeei_contig11257.3.1|Name=mRNA_P-wetherbeei_contig11257.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig11257:1409..1906+ (Phaeothamnion wetherbeei SAG_119_79)back to top |