prot_P-wetherbeei_contig11257.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11257.3.1
Unique Nameprot_P-wetherbeei_contig11257.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length166
Homology
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A3C0TWM9_9PROT (HTH marR-type domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TWM9_9PROT)

HSP 1 Score: 185 bits (469), Expect = 5.620e-57
Identity = 95/155 (61.29%), Postives = 118/155 (76.13%), Query Frame = 0
Query:    1 MTNVTTKPPVDPLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNM 155
            MT  T   P  P   +F+++RE+ WL++D +R++ RSIER VR  G+   QWRVLVQ+AR++GQTQS LAEE EIAPAPLGRLLDRLE QK IERR D SDRR KR+Y    EQ  FF+RLRQLA+  FE VY+S+++ DL ELQRLLQK+K+NM
Sbjct:    1 MTESTLSFPPPPNDPSFEMRREIAWLIFDTARMMTRSIERHVRSTGVNSNQWRVLVQIARQNGQTQSHLAEEVEIAPAPLGRLLDRLEKQKFIERRPDPSDRRVKRVYFTGKEQAQFFDRLRQLALANFEKVYRSLDDKDLRELQRLLQKIKTNM 155          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A351T5X4_9PROT (HTH marR-type domain-containing protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T5X4_9PROT)

HSP 1 Score: 169 bits (429), Expect = 5.020e-51
Identity = 89/148 (60.14%), Postives = 115/148 (77.70%), Query Frame = 0
Query:   15 DAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNML---QDG 159
            D F+LQR+VGWL++D SRLLMRS E++VR+ G+TP QWRVL+Q+ R +GQTQ+E+AEETEIA APLGRLLD+LE+Q +IERR D  DRRAKRIYL + E   F E  RQ A  QF+TVY  + +++LLEL R+L  +K+N+    QDG
Sbjct:    2 DRFELQRDVGWLIFDVSRLLMRSFEKKVREVGLTPHQWRVLLQIGRREGQTQTEIAEETEIARAPLGRLLDKLEEQGVIERRQDPHDRRAKRIYLVEREGKTFMEPFRQQAKEQFDTVYGKLADSELLELIRMLDHIKANIQSAEQDG 149          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A518RBJ9_9SPHN (MarR family transcriptional regulator n=1 Tax=Sphingomonas suaedae TaxID=2599297 RepID=A0A518RBJ9_9SPHN)

HSP 1 Score: 97.8 bits (242), Expect = 6.200e-23
Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 0
Query:   19 LQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNML 156
            +   +G+LV D +RLL R  +   R+ G+T  QWR L  LAR +G  Q  LAE  E+ P  L R+LDRLED  ++ERR D +DRRA RI+L D  Q     +LR +A    E     ++EAD  +++R L ++++N++
Sbjct:    1 MNEPLGFLVADLARLLRRDFDLRAREIGVTNAQWRTLKTLARHEGSNQGALAELLEVEPITLARMLDRLEDAGLVERRRDPADRRAWRIHLTDAAQ-PLIGQLRDIADELVEDALAGISEADRAQMRRTLDRVRTNLI 137          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A371BH81_9SPHN (MarR family transcriptional regulator n=1 Tax=Sphingorhabdus pulchriflava TaxID=2292257 RepID=A0A371BH81_9SPHN)

HSP 1 Score: 97.1 bits (240), Expect = 1.170e-22
Identity = 57/143 (39.86%), Postives = 84/143 (58.74%), Query Frame = 0
Query:   19 LQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDGTE 161
            +  ++G+L+ D +RL+ R+ +  VR  GIT  QWRVL  L R  G TQ  LAE  ++ P  LGR++DR++D  ++ERRAD SDRRA RIYL    +    E L+ LA   F      +NEA   +L+ +L  ++ N+ +   E
Sbjct:    1 MSEDLGFLIGDTARLMRRAFDERVRTKGITRPQWRVLGLLNRFGGSTQVALAEMMDVEPITLGRMIDRMQDSGLVERRADPSDRRAWRIYLTPSGESRL-EDLKPLATELFADAVSGLNEAQQADLEAMLDTIRLNLTRKAPE 142          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A7Y8M8X7_9PROT (MarR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8M8X7_9PROT)

HSP 1 Score: 95.9 bits (237), Expect = 1.240e-21
Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 0
Query:    6 TKPPVDPLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNM 155
            T+ P    AD  +++ E+GWL++D  RLL R+ + + RK G+T  QWRV+V L REDG TQ  LAE  +I  AP+GRL+DRLE    IERR D  D RA+R+Y    +       L+  A   F+ ++  +++AD   L R L  ++  +
Sbjct:   20 TRRPAPAGADV-EVEFEIGWLMHDVHRLLSRAFDDKFRKLGLTRAQWRVMVHLLREDGLTQKALAEVDQIEKAPMGRLVDRLEQLGWIERRPDPLDGRARRVYRT-AKIDPLLPELKAGAATIFDHMFDGLDDADRGRLHRTLSAMRDRL 167          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A5C9A347_9GAMM (MarR family transcriptional regulator n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C9A347_9GAMM)

HSP 1 Score: 93.6 bits (231), Expect = 2.620e-21
Identity = 55/141 (39.01%), Postives = 90/141 (63.83%), Query Frame = 0
Query:   18 DLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQD 158
            D + ++ + ++ A+RLL R+ +R  R+ G+T  +W+VL  LAR++G  Q+ELAE  ++AP  L R LD LE + ++ERR D SDRR  RIYL +  Q A    LR+LA    E   + ++  ++ +LQ+LL +++ N+ +D
Sbjct:    5 DSEAQMSFELHSAARLLRRNFDRRAREHGLTRSRWQVLWHLARQEGLKQAELAENMDVAPISLTRQLDNLEQEGLVERRRDDSDRRCFRIYLTEAAQPALTV-LRELAQATREQALEGLSAREVDQLQKLLGRVRQNLSRD 144          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: UPI000EAA78B8 (MarR family transcriptional regulator n=1 Tax=Tsuneonella amylolytica TaxID=2338327 RepID=UPI000EAA78B8)

HSP 1 Score: 93.2 bits (230), Expect = 3.800e-21
Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   23 VGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDGTEPL 163
            +G L+ D+SRLL R  +  VR  G+T  QW+VL  L R +G  Q  LAE+ ++ P  + R++DRL+D  ++ERRAD +DRR+ R++L    + A  ++LR +A   FE     + EAD   LQ +L++++ N+ +   E L
Sbjct:    4 IGSLLGDSSRLLRREFDARVRDIGVTWPQWQVLTTLRRHEGINQGGLAEQLDVEPITVCRMVDRLQDAALVERRADPADRRSWRLFLTPRAE-ALLDQLRPIAERLFEEALDGIAEADRAALQAMLERIRDNLSRRDAEGL 143          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A2S7K171_9PROT (MarR family transcriptional regulator n=1 Tax=Marinicaulis flavus TaxID=2058213 RepID=A0A2S7K171_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 5.480e-21
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 0
Query:   19 LQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDGTEPL 163
            L+R  G+LV+D +RLL R  +R V+  G+T  QW VL  L R DG+TQ  LA+E ++ PAPLGRL+DRLE+   + R    +DRRA  ++L D +     E +R  A + ++  +K ++  ++ +    L   KSN+     EP+
Sbjct:    8 LERNPGYLVHDVARLLRREFDRRVKHLGLTRAQWFVLAHLYRNDGRTQRALADELDMEPAPLGRLIDRLEESGWVRRAPSAADRRANLVHLTD-KIIPLIEEMRAAANNLYKDAFKGMSNKNVEDFVEALTIAKSNLNDLSAEPV 151          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A2G2GJN8_9PROT (MarR family transcriptional regulator n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GJN8_9PROT)

HSP 1 Score: 92.8 bits (229), Expect = 6.440e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   21 REVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNM 155
            R  G+LV+D +RLL R+ ++ VR+ G+T  QW VL  L R DGQTQ ELA++ ++ PAP+GRL+DRLE+   + R AD  DRR KR++L+  +     E +R+ A   +   +  V+  D      +L+  K N+
Sbjct:   10 RNPGFLVHDLARLLRRTFDQRVRQIGLTRAQWFVLAHLYRTDGQTQRELADDLDMEPAPIGRLIDRLEESGWLRREADARDRRVKRVFLS-AKILPHMEEMRETAKGVYADAFFGVSSQDFETFVDVLEAAKFNL 143          
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Match: A0A255Y8J0_9SPHN (Transcriptional regulator n=1 Tax=Sandarakinorhabdus cyanobacteriorum TaxID=1981098 RepID=A0A255Y8J0_9SPHN)

HSP 1 Score: 92.4 bits (228), Expect = 9.320e-21
Identity = 55/148 (37.16%), Postives = 90/148 (60.81%), Query Frame = 0
Query:   12 PLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQQWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLSDRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQKLKSNMLQDG 159
            P A  F +   +G LV DA+RLL R  +   R  G++  QW+VL+ LAR +G +Q+ LAE  E+    +GR++DRLE+  ++ERR D +DRRA +++L         + L+ +A      +   ++EA+  EL RLL +L++N+L++G
Sbjct:    9 PPAGRFAVADTIGVLVSDAARLLRRRFDARARAIGVSRAQWQVLIALARSEGSSQAALAERLEVETITVGRMVDRLEEAGLVERRPDPADRRAWQLFLTARANDLLLD-LQPVADAVRAEMLAGLSEAEQAELHRLLSRLRANLLREG 155          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11257.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TWM9_9PROT5.620e-5761.29HTH marR-type domain-containing protein n=1 Tax=Al... [more]
A0A351T5X4_9PROT5.020e-5160.14HTH marR-type domain-containing protein n=3 Tax=Al... [more]
A0A518RBJ9_9SPHN6.200e-2340.58MarR family transcriptional regulator n=1 Tax=Sphi... [more]
A0A371BH81_9SPHN1.170e-2239.86MarR family transcriptional regulator n=1 Tax=Sphi... [more]
A0A7Y8M8X7_9PROT1.240e-2140.00MarR family transcriptional regulator n=1 Tax=Alph... [more]
A0A5C9A347_9GAMM2.620e-2139.01MarR family transcriptional regulator n=2 Tax=Para... [more]
UPI000EAA78B83.800e-2138.30MarR family transcriptional regulator n=1 Tax=Tsun... [more]
A0A2S7K171_9PROT5.480e-2137.93MarR family transcriptional regulator n=1 Tax=Mari... [more]
A0A2G2GJN8_9PROT6.440e-2140.00MarR family transcriptional regulator n=1 Tax=Robi... [more]
A0A255Y8J0_9SPHN9.320e-2137.16Transcriptional regulator n=1 Tax=Sandarakinorhabd... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000835MarR-type HTH domainPRINTSPR00598HTHMARRcoord: 131..151
score: 16.67
coord: 100..116
score: 33.33
coord: 64..80
score: 23.04
coord: 81..96
score: 40.62
IPR000835MarR-type HTH domainSMARTSM00347marrlong4coord: 40..141
e-value: 2.1E-16
score: 70.5
IPR000835MarR-type HTH domainPFAMPF01047MarRcoord: 47..104
e-value: 1.6E-13
score: 50.3
IPR000835MarR-type HTH domainPROSITEPS50995HTH_MARR_2coord: 20..153
score: 24.923014
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 6..156
e-value: 1.4E-30
score: 108.0
NoneNo IPR availablePANTHERPTHR33164:SF64TRANSCRIPTIONAL REGULATOR SLYAcoord: 23..155
NoneNo IPR availablePANTHERPTHR33164TRANSCRIPTIONAL REGULATOR, MARR FAMILYcoord: 23..155
IPR011991ArsR-like helix-turn-helix domainCDDcd00090HTH_ARSRcoord: 53..114
e-value: 4.18244E-5
score: 38.0486
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 14..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11257contigP-wetherbeei_contig11257:1409..1906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11257.3.1mRNA_P-wetherbeei_contig11257.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11257 1409..1906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11257.3.1 ID=prot_P-wetherbeei_contig11257.3.1|Name=mRNA_P-wetherbeei_contig11257.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
MTNVTTKPPVDPLADAFDLQREVGWLVYDASRLLMRSIEREVRKAGITPQ
QWRVLVQLAREDGQTQSELAEETEIAPAPLGRLLDRLEDQKIIERRADLS
DRRAKRIYLADGEQGAFFERLRQLAMHQFETVYKSVNEADLLELQRLLQK
LKSNMLQDGTEPLKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000835HTH_MarR-typ
IPR036388WH-like_DNA-bd_sf
IPR011991ArsR-like_HTH
IPR036390WH_DNA-bd_sf