mRNA_P-wetherbeei_contig10988.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A7J7PB09_9MAGN (Enhancer of rudimentary homolog n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7PB09_9MAGN) HSP 1 Score: 102 bits (254), Expect = 3.020e-26 Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 1 AGQHTLVLLQ-EQEGAQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
A +HT+VL+Q Q A ++++ES S AMDGI YE+K++ ++P +RNI YDI+DL++F+D L DL+AL D + Y P+DRQW K F HL++ A
Sbjct: 2 ANRHTIVLMQTSQNRASRTFMDYESVSQAMDGICGLYERKIKELNPSRRNITYDIADLYSFIDGLADLSALVYDHSVQAYLPYDRQWIKHRTFNHLKKLA 101
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A0D6R333_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R333_ARACU) HSP 1 Score: 102 bits (253), Expect = 7.560e-26 Identity = 47/100 (47.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 1 AGQHTLVLLQEQEG-AQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
A +HT+VL+Q + +++F+S + AMDGI YE+KL+ ++P RNIQYDI DL+ F+D L D++AL DP + Y P+DR+W K+ IF+HLR+ A
Sbjct: 2 ANRHTIVLIQTAPNRSTRTFMDFDSITQAMDGICGLYERKLKELNPAIRNIQYDIEDLYNFIDGLADMSALVCDPSIQAYLPYDRKWIKERIFQHLRKLA 101
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A1Q3CIY5_CEPFO (Enhancer of rudimentary homolog n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CIY5_CEPFO) HSP 1 Score: 100 bits (248), Expect = 2.200e-25 Identity = 45/100 (45.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 1 AGQHTLVLLQ-EQEGAQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
A +HT++L+Q Q A +++++S S AMDGI YE+KL+ ++P RN+ YDISDL+ F+D L DL++L D + Y P+DRQW K +F+HL++ A
Sbjct: 2 ANKHTIILMQTSQNRATRTFMDYDSISQAMDGICGIYERKLKDLNPAARNLTYDISDLYNFIDGLADLSSLVYDQSVQAYLPYDRQWIKQRLFQHLKKMA 101
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A7S0V3F6_9CRYP (Enhancer of rudimentary homolog n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V3F6_9CRYP) HSP 1 Score: 100 bits (248), Expect = 2.470e-25 Identity = 48/100 (48.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 1 AGQHTLVLLQEQEG-AQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
AG HT+VLLQE A + +FES AM+GI YEQ+L+ ++PG+RNI YDI++L+AF+D LGDL L + + Y PH++QW KD +++HL++ A
Sbjct: 7 AGSHTIVLLQETSSQASRTFSDFESIQDAMNGICQLYEQRLKSLNPGQRNITYDITELYAFIDQLGDLCCLVYNNQGA-YQPHNKQWVKDRVYQHLKKMA 105
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: K3YB26_SETIT (Enhancer of rudimentary homolog n=10 Tax=Panicoideae TaxID=147369 RepID=K3YB26_SETIT) HSP 1 Score: 99.8 bits (247), Expect = 3.220e-25 Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 1 AGQHTLVLLQ-EQEGAQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
AG+HT++L+Q Q A +L+F+S + A+DGI YE+K+R I+P RN+ YDISDL+ F+D L D++AL D + P+DRQW K +F+HL+R A
Sbjct: 2 AGRHTIILMQPSQNRATRTFLDFDSVNHALDGICGLYERKIRNINPMVRNLTYDISDLYNFIDGLTDISALVFDDSLHAFLPYDRQWIKQKLFQHLKRLA 101
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A067C2K0_SAPPC (Enhancer of rudimentary homolog n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C2K0_SAPPC) HSP 1 Score: 99.0 bits (245), Expect = 6.850e-25 Identity = 48/97 (49.48%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 10 HTLVLLQEQEGAQG-IYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
HT++L+Q E YL+FES + AMDG+V YE KL++++P KRNI YDI DL+ ++D+L DL+ L LD TK Y P ++W K IF+ LR QA
Sbjct: 8 HTIILVQYTEDPNSRTYLDFESVNGAMDGVVKMYEAKLKQLNPSKRNITYDIQDLYNYIDSLADLSTLVLDLETKTYLPSGKEWIKKKIFQVLRNQA 104
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A7S0M9W6_9CRYP (Enhancer of rudimentary homolog n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M9W6_9CRYP) HSP 1 Score: 99.0 bits (245), Expect = 7.050e-25 Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 1 AGQHTLVLLQEQEG-AQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
AG+HT+VLLQE + +FE+ + AM+GI YEQ+L++++PG RNI YDI++L+ F+D LGDL L + T Y PH++QW KD ++ HL+R A
Sbjct: 7 AGKHTIVLLQESASKGSRTFSDFETVADAMNGICQLYEQRLKQLNPGVRNITYDITELYGFIDGLGDLCCLVYNG-TGAYEPHNKQWVKDRVYAHLKRMA 105
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A6P8BXM6_PUNGR (Enhancer of rudimentary homolog n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8BXM6_PUNGR) HSP 1 Score: 98.6 bits (244), Expect = 8.930e-25 Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 10 HTLVLLQEQEG-AQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQAG 300
HT+VL+Q A ++++ES S A+DGI YE+KL+ ++P RNI YDISDL+ F+D L DL+AL P + Y P+DR+W K ++HL++ AG
Sbjct: 5 HTIVLMQPSPNRASRTFMDYESVSQAIDGICGLYERKLKELNPAIRNITYDISDLYNFIDGLADLSALVYSPSVQAYLPYDREWIKGRTYQHLKKMAG 102
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: L1IB99_GUITC (Enhancer of rudimentary homolog n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IB99_GUITC) HSP 1 Score: 98.2 bits (243), Expect = 1.270e-24 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 10 HTLVLLQEQEG-AQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
HT+VLLQE + + +FES S AM+GI YEQ+L++++PG RNI YDIS+L+AF+D LGDL L + Y PH++QW KD +F HL+R A
Sbjct: 6 HTIVLLQETASKSTRTFSDFESVSEAMNGICQLYEQRLKQMNPGMRNITYDISELYAFIDQLGDLCCLVYNGYGA-YEPHNKQWVKDRVFAHLKRMA 101
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Match: A0A7I8LJK6_SPIIN (Enhancer of rudimentary homolog n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LJK6_SPIIN) HSP 1 Score: 96.7 bits (239), Expect = 5.280e-24 Identity = 45/100 (45.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query: 1 AGQHTLVLLQEQEG-AQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIQYDISDLFAFLDALGDLAALTLDPRTKQYGPHDRQWCKDHIFRHLRRQA 297
A +HT++L+Q A +++++S S AMDGI YE+KL+ ++P RNIQYDI+DL+ F+D L DL+AL D + Y P+DR+W K F HL++ A
Sbjct: 2 ANRHTIILMQSSPNRATRTFMDYDSISQAMDGICGLYERKLKELNPTVRNIQYDIADLYNFIDGLTDLSALVFDHSMQAYLPYDREWIKQRTFHHLKKLA 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10988.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10988.1.1 >prot_P-wetherbeei_contig10988.1.1 ID=prot_P-wetherbeei_contig10988.1.1|Name=mRNA_P-wetherbeei_contig10988.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp AGQHTLVLLQEQEGAQGIYLEFESTSLAMDGIVNFYEQKLRRIHPGKRNIback to top mRNA from alignment at P-wetherbeei_contig10988:184..652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10988.1.1 ID=mRNA_P-wetherbeei_contig10988.1.1|Name=mRNA_P-wetherbeei_contig10988.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=469bp|location=Sequence derived from alignment at P-wetherbeei_contig10988:184..652+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10988:184..652+ >mRNA_P-wetherbeei_contig10988.1.1 ID=mRNA_P-wetherbeei_contig10988.1.1|Name=mRNA_P-wetherbeei_contig10988.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig10988:184..652+ (Phaeothamnion wetherbeei SAG_119_79)back to top |