mRNA_P-wetherbeei_contig10483.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A5N6LWR3_9ASTR (ZZ-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LWR3_9ASTR) HSP 1 Score: 63.2 bits (152), Expect = 1.960e-9 Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 1 Query: 43 QVRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 ++RN WP +L +GG+ + GL D+ VT TAP PG Y +++RM P G+KFGQRLWVS+ V Sbjct: 892 RMRNNGSIIWPCGSQLQWIGGDRLSNSDSVDVEIPVDGLHVDKEIDIAVTFTAPELPGRYVSYWRMASPSGQKFGQRLWVSIQV 975
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A1Q3B982_CEPFO (PB1 domain-containing protein/ZZ domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3B982_CEPFO) HSP 1 Score: 62.4 bits (150), Expect = 3.560e-9 Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 1 Query: 43 QVRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 ++RN AWP +L+ +GG+ A A PGG+ D+ V TAP PG Y +++RM P KFGQR+WV V V Sbjct: 431 RMRNNGGIAWPQETQLVWIGGDRFSDAVSAEIQIPPGGVPVDGELDIAVDFTAPELPGRYISYWRMMTPSVGKFGQRVWVLVQV 514
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A2R5G144_9STRA (Next to BRCA1 1 protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G144_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.870e-9 Identity = 32/85 (37.65%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 43 QVRNES-DEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 ++ N S D+AWPD+ L+C+GG+ + Q LR+ +A D++V L AP + G Y ++R+ GG++FG RLW+ +TV Sbjct: 635 RIANPSADQAWPDDVRLVCVGGSRMEGPDEGVPVAQ---LREQSAADLSVELVAPAESGRYVGYWRLMS-GGQRFGHRLWIDITV 715
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A7S0MRM9_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MRM9_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 8.450e-9 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 1 Query: 43 QVRNESDEAWPDN-CELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 +VRN+S AWPD EL+ + G + A L G +++V +TAP PG+Y+ F+R+R P G KFGQRL SV V Sbjct: 172 RVRNDSPRAWPDGPIELVYVSGKASDRLTPQDAYPVEAKLAPGEETELSVEITAPTAPGLYQGFWRLRGPKGCKFGQRLGCSVLV 256
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A2U1P8I9_ARTAN (PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein n=3 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1P8I9_ARTAN) HSP 1 Score: 59.3 bits (142), Expect = 4.340e-8 Identity = 31/84 (36.90%), Postives = 42/84 (50.00%), Query Frame = 1 Query: 43 QVRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 ++RN WP +L +GG+ GL DV V TAP PG Y +++RM PGG+KFGQR+WV + V Sbjct: 495 RMRNNGSITWPHGSQLQWIGGDRISNTLSVDVEIPADGLPVDNELDVAVDFTAPELPGRYVSYWRMAAPGGQKFGQRVWVLIQV 578
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A8K0G3S3_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0G3S3_9COLE) HSP 1 Score: 58.2 bits (139), Expect = 6.210e-8 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 1 Query: 46 VRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 V N E WP C L C GG+ + A T+ L+ G +++ +T+P QPG+Y++ +RM P G FG LW +TV Sbjct: 110 VMNNGTETWPSGCFLQCAGGDS-----LGAIRTEFPCLKPGDYTFLSLQMTSPVQPGIYQSKWRMCTPSGSYFGDPLWAIITV 187
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A553NE61_TIGCA (N_BRCA1_IG domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NE61_TIGCA) HSP 1 Score: 57.4 bits (137), Expect = 1.130e-7 Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 1 Query: 7 AAPPASSLHPPSQVRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 + PPA+ V N E WP+ C L+ +G QMA V + L G DV+V +T+P PG+YE+ +RM G FG +WV +TV Sbjct: 90 SVPPATRFTKTWAVTNPGAERWPEGCVLVFS--SGLQMAEVGRIGVRS--LAPGEQADVSVDMTSPAAPGIYESKWRMSTSSGLFFGDTIWVIITV 181
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A131XCI0_9ACAR (N_BRCA1_IG domain-containing protein n=10 Tax=Ixodidae TaxID=6939 RepID=A0A131XCI0_9ACAR) HSP 1 Score: 56.6 bits (135), Expect = 2.970e-7 Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 7 AAPPASSLHPPSQVRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 A PP + +++N D WP C L +GG+ + + + + LR G DV+V +++P +PGVY+ +RM GG+ FG+ +W +TV Sbjct: 87 AVPPNTRFVKTWRIQNTGDTDWPPACSLKFVGGD--HLGHMNRVSVES--LRPGHTTDVSVEMSSPGKPGVYQGQWRMATMGGQMFGEVIWAILTV 178
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: UPI0013F27710 (protein ILRUN isoform X2 n=1 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F27710) HSP 1 Score: 53.1 bits (126), Expect = 2.180e-6 Identity = 30/96 (31.25%), Postives = 51/96 (53.12%), Query Frame = 1 Query: 7 AAPPASSLHPPSQVRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 + PP+++ +V+N EAWP L + G + G P G ++ +++VTL++P +PGVYE+ +RM G FG+ +W +TV Sbjct: 56 SVPPSTNFQKSWRVQNSGTEAWPHGIHLELISG---ERMGTTRIAVPPIGPKE--TTELSVTLSSPSEPGVYESKWRMVTANGLYFGEVIWGIITV 146
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Match: A0A7S0QTT3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QTT3_9CHLO) HSP 1 Score: 53.5 bits (127), Expect = 2.780e-6 Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 1 Query: 55 ESDEAWPDN-CELLCLGGNGAQMAGVAAATTQPGGLRQGAARDVTVTLTAPRQPGVYEAFFRMRRPGGEKFGQRLWVSVTV 294 +S +WPD EL+ + G + A L G +++V +TAP PG+Y+ F+R+R P G KFGQRL SV V Sbjct: 1 DSPRSWPDGPIELVYVSGKASDRLTPQDAYPVEAKLAPGEETELSVEITAPTAPGLYQGFWRLRGPKGCKFGQRLGCSVLV 81 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10483.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10483.2.1 >prot_P-wetherbeei_contig10483.2.1 ID=prot_P-wetherbeei_contig10483.2.1|Name=mRNA_P-wetherbeei_contig10483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp PPAAPPASSLHPPSQVRNESDEAWPDNCELLCLGGNGAQMAGVAAATTQPback to top mRNA from alignment at P-wetherbeei_contig10483:567..869+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10483.2.1 ID=mRNA_P-wetherbeei_contig10483.2.1|Name=mRNA_P-wetherbeei_contig10483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig10483:567..869+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10483:567..869+ >mRNA_P-wetherbeei_contig10483.2.1 ID=mRNA_P-wetherbeei_contig10483.2.1|Name=mRNA_P-wetherbeei_contig10483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig10483:567..869+ (Phaeothamnion wetherbeei SAG_119_79)back to top |