mRNA_P-wetherbeei_contig1045.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: D8LDX7_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX7_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 4.490e-10 Identity = 64/232 (27.59%), Postives = 88/232 (37.93%), Query Frame = 1 Query: 568 GDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIPPEAPGTAAANLTSPVSSRTPSLRRXXXXXXXXXXGTAGGIGAAIDGAAAXXXXXXXXXXXXXXXXXXXXXAELNALQEIMSLPPVLPLLPPGADVSARQLQVAQSLLWGVPLTEPQEKELLQGSSHGSAVAVASVXXXXXXDASGMPAPATFGRKAVADFLSRHNLSFVCRGGLAADGTGPHGVALSQAAKVFTV 1263 G+ LG +VWE +FDRLPLA V+D DIFC + GIP P+ T + +Q+IM +PPV + PP + QVA +W P + QE L + S G ++ FG KA+ DFL++ NLS++ R A GV+LS+ AKVFTV Sbjct: 246 GEALGEKVWESCNAVFDRLPLAGVIDQDIFCVHGGIP------------RPLEGST------------------------------------------------------SRIQDIMCVPPVASVCPPNECETFESQQVASDCMWSDPAKDEQELAL-EDSGFGESLRGGGAIC--------------FGTKAIDDFLTQGNLSYIVR----AHEAHSEGVSLSKGAKVFTV 392
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A7S2ULL1_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULL1_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.640e-7 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 568 GDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIP 678 GD LGF VWEQ +FDRLPLAAV+D DIFC + GIP Sbjct: 92 GDDLGFRVWEQTNQVFDRLPLAAVIDQDIFCVHGGIP 128
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A7S2R9H0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R9H0_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.170e-7 Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 568 GDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIP 678 GD+LGF+VWEQ +FDRLPL V+D DIFC + GIP Sbjct: 53 GDELGFKVWEQTNQVFDRLPLVGVIDQDIFCVHGGIP 89
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A1D2N6G8_ORCCI (Serine/threonine-protein phosphatase n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2N6G8_ORCCI) HSP 1 Score: 63.2 bits (152), Expect = 7.610e-7 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 547 QQSVALLGDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIPPEAPGTAAANLTSPVSSRTP 738 ++ + GDKLG E+W + D+FD +PLAAV+D IFC++ GIPP G+ A + + S P Sbjct: 254 KECLTKFGDKLGREIWNAVNDVFDVMPLAAVIDKKIFCAHGGIPPPWIGSGAVEIIKSIPSPLP 317
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A7S2WM62_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM62_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 7.940e-7 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 544 LQQSVALLGDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIPPEAPGTAAANLTSPVSSRTPSL 744 + Q + G+ G EVWE++ +FDRLPLAAV+DH+IFC + GIP PG+A + R P + Sbjct: 325 IAQCKSRFGEDRGEEVWEELNQVFDRLPLAAVIDHEIFCIHGGIPRPLPGSAPGASRLDMICRVPPV 391
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A6V1NP81_HETAK (Serine/threonine-protein phosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NP81_HETAK) HSP 1 Score: 63.2 bits (152), Expect = 8.350e-7 Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 1 Query: 568 GDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIPPEAPGT 696 G+++G VWE++ +FDRLPLAAV+DHD+FC + G+P PG+ Sbjct: 236 GEEMGIRVWEEVNQVFDRLPLAAVIDHDVFCVHGGLPRPIPGS 278
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A7S0YR00_9CRYP (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YR00_9CRYP) HSP 1 Score: 62.8 bits (151), Expect = 1.050e-6 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 523 AGAAPPLLQQSVALLGDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIPPEAPGTAAANLTSPVSSRTPSLR 747 AG AP L Q +L G+++G VWE I D+FD LPLAA++D +FC++ GIP +L SPV ++ +R Sbjct: 165 AGYAPCLQQCCTSLFGEEVGMSVWESINDVFDVLPLAAIIDRSVFCTHGGIPDP-------SLLSPVKTQDQLVR 232
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A7R9VN74_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VN74_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.370e-6 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 568 GDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIP 678 GD LGF VWEQ +FDRLPLAAV+D DIFC + GIP Sbjct: 259 GDDLGFRVWEQTNQVFDRLPLAAVIDQDIFCVHGGIP 295
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A7S1GWJ1_HEMAN (Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWJ1_HEMAN) HSP 1 Score: 62.0 bits (149), Expect = 1.650e-6 Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 1 Query: 523 AGAAPPLLQQSVALLGDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIP 678 AG +P L Q ++L G+++G VWE I D+FD LPLAA++D +FC++ GIP Sbjct: 179 AGYSPCLQQCCISLFGEEVGMSVWESINDVFDVLPLAAIIDRSVFCTHGGIP 230
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Match: A0A7S4IG93_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IG93_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.550e-6 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 568 GDKLGFEVWEQIQDIFDRLPLAAVVDHDIFCSYSGIP 678 GD LGF VWEQ +FDRLPLAAV+D DIFC + GIP Sbjct: 286 GDDLGFRVWEQTNQVFDRLPLAAVIDQDIFCVHGGIP 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1045.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1045.1.1 >prot_P-wetherbeei_contig1045.1.1 ID=prot_P-wetherbeei_contig1045.1.1|Name=mRNA_P-wetherbeei_contig1045.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=612bp LNGSSGCVRRKGSSRLGRTGRRGSGSSSGSGSRKSSLTAGARLIGSLGGSback to top mRNA from alignment at P-wetherbeei_contig1045:5714..7719+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1045.1.1 ID=mRNA_P-wetherbeei_contig1045.1.1|Name=mRNA_P-wetherbeei_contig1045.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2006bp|location=Sequence derived from alignment at P-wetherbeei_contig1045:5714..7719+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1045:5714..7719+ >mRNA_P-wetherbeei_contig1045.1.1 ID=mRNA_P-wetherbeei_contig1045.1.1|Name=mRNA_P-wetherbeei_contig1045.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1836bp|location=Sequence derived from alignment at P-wetherbeei_contig1045:5714..7719+ (Phaeothamnion wetherbeei SAG_119_79)back to top |