mRNA_P-wetherbeei_contig1044.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA) HSP 1 Score: 218 bits (554), Expect = 3.700e-66 Identity = 110/181 (60.77%), Postives = 136/181 (75.14%), Query Frame = 1 Query: 172 LGGGLGPLTPEQADGRPML-RNLPVLRYWPLEKTGEPPPPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQPIQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMGH 711 +GGGL P T ++ GRP+L + LP ++ W + +TG PP P LGESC RL+ GT GFG GLLFGMFLGAMGDMQPIQ+INGREVPQAPL EQ RAAY T +RSL MA+NF +FSA+ + +ECV+EK+R KHD+MNSVY GC+ G A K GP+ GC+G+AAFSA ID++MGH Sbjct: 20 VGGGLSPSTEQELGGRPLLLKFLPTVKAWDM-RTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE) HSP 1 Score: 194 bits (492), Expect = 5.790e-57 Identity = 93/142 (65.49%), Postives = 112/142 (78.87%), Query Frame = 1 Query: 286 PNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQPIQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMGH 711 P P L ESC +L+ GTV G G G +FG+FLGAMGDMQP+QMINGREVPQAP REQ R AY+QT+ RSLSM RNF +FSA+ +G+ECV+EK+R K D+MNSVY+GC GAA KQGPQA C GC+G+A FSA +D +MGH Sbjct: 51 PTPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.840e-41 Identity = 85/176 (48.30%), Postives = 110/176 (62.50%), Query Frame = 1 Query: 190 PLTPEQADGRPMLRNLPVLRYW-PLEKTGEPPPPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMGH 711 P+ EQ + LP L W P + PPP+ +++ ESC ++ G G GLL G+FLGAM DM P + +ING+EVPQAPL+EQ R R T + + +RNF + + G+EC+VEK R KHDV N V SGCV GAA+ AKQGPQA +GC G AAFS ID++MGH Sbjct: 45 PVPKEQLNPYFNTTRLPYLIPWMPTFNGAQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.440e-41 Identity = 83/143 (58.04%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 283 PPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMG 708 PP+ WL ESCA + G + G GL+ G+FLGAM DM P + +ING+EVPQAPLREQMR R T +SL ARNF + + GT+C+VEK R HDV NSV SGCV GAA+ AKQGPQA IGC G AAFS ID +MG Sbjct: 93 PPDFGWLSESCAGKTAIGVLGGSVCGLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A7S2AAN4_TRICV (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAN4_TRICV) HSP 1 Score: 154 bits (388), Expect = 1.170e-40 Identity = 86/166 (51.81%), Postives = 104/166 (62.65%), Query Frame = 1 Query: 229 RNLPVLRYW-PL---EKTGEPPPPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMGH 711 R+LP L W P+ + E PPP+ +WL ESC + G G GL G+FLGAM DM P + +ING+EVPQAPL+EQMR R T + + +RNF + + GTEC+VEK R KHDV NS GCV GAAL AKQGPQA IGC G A FS IDS+ H Sbjct: 95 RSLPYLTPWYPIPGPNASAEGPPPDFSWLSESCGGKAAIGVFGGAVCGLFMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQMRTTVRATGEKCIYWSRNFAFITGVFGGTECLVEKYRGKHDVWNSALGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSVFPH 260
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.260e-40 Identity = 77/142 (54.23%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 289 NPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMGH 711 NP W ESC R V G+ +G GL+ G+FLGAMGD+ P I + G+E PQ PL EQ R AYR T+ RS+ AR+F +AL GTECV+EK R +HD N V SGC AGA ++A GP A C+GC G AAFSAA +++MGH Sbjct: 50 NPGWAAESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: W7TL11_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL11_9STRA) HSP 1 Score: 150 bits (379), Expect = 5.580e-40 Identity = 88/163 (53.99%), Postives = 105/163 (64.42%), Query Frame = 1 Query: 235 LPVLRYWPLEKTGEP----PPPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMG 708 LP +Y L +T PPNP E+C R V G V+G G G++ G+FLGAMGDM P I +INGRE PQAP EQ+R AYR T R ARNF +AL G +CVVEK R KHD N+V SGC GAAL+AKQGPQA C+GC G AAFS ++ +MG Sbjct: 46 LPFYKYVSLPQTPAGMVAVAPPNPQ---ENCVGRSVFGAVAGAGLGVMMGIFLGAMGDMSPAIPIINGREAPQAPAGEQLRLAYRATFERCGHWARNFMALTALFSGVDCVVEKFRGKHDAYNAVISGCGVGAALSAKQGPQAACLGCAGFAAFSGIMEVVMG 205
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A7R9WDT6_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDT6_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.300e-39 Identity = 87/173 (50.29%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 199 PEQADGRPMLRNLPVLRYW-PL---EKTGEPPPPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSI 702 PE G R++PVL W P+ + E PPP+ +WL ESC + G G GLL G+FLGAM DM P + +I+G+EVPQAPL+EQ+R R T + L +RNF + + GTEC+VEK R KHDV N+ GCV GAAL AKQGPQA IGC G A FS IDS+ Sbjct: 74 PEFTLGTLTRRSIPVLTPWYPVPGPNSSMEGPPPDFSWLSESCGGKAAMGVFGGAVCGLLMGVFLGAMSDMTPPVTVIDGKEVPQAPLKEQVRTTLRATGEKCLYWSRNFAFITGVFGGTECLVEKYRGKHDVWNAAIGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSV 246
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC) HSP 1 Score: 148 bits (373), Expect = 1.270e-38 Identity = 84/187 (44.92%), Postives = 108/187 (57.75%), Query Frame = 1 Query: 154 SPPTVILGGGLGPLTPEQADGRPMLRNLPVLRYWPLEKTGEPP-PPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMG 708 +P ++ P + + G +R LP + W PPN WL ESC + G + G GL+ G+FLGA+ DM P + +I G+EVPQAPL+EQMR R T+ +SL R F + + G+EC+VEK R KHDV NSV SGC+ GAA+ AKQGPQA GC G A FS IDS MG Sbjct: 57 TPAGPLVDSSASPHQVDMSRGALTMRGLPYPQPWARANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Match: A0A1Z5K7I7_FISSO (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7I7_FISSO) HSP 1 Score: 148 bits (373), Expect = 2.010e-38 Identity = 80/162 (49.38%), Postives = 104/162 (64.20%), Query Frame = 1 Query: 229 RNLPVLRYWPLEKTGEPPPPNPAWLGESCAVRLVAGTVSGFGAGLLFGMFLGAMGDMQP-IQMINGREVPQAPLREQMRAAYRQTSTRSLSMARNFGTFSALLLGTECVVEKVRAKHDVMNSVYSGCVAGAALAAKQGPQAMCIGCIGVAAFSAAIDSIMGH 711 R+LP W + PPP+ +WL SCA ++ G + G G G L G+FLGA+ D P +Q+I GR+VPQAPLREQMR R T+ +S A NF + + G+EC+VEK R K+D+ NSV SGC+ GAA+ AK GPQ+ +GC G AAFS IDS M H Sbjct: 102 RSLPYPLPWKPVASPTEPPPDFSWLTGSCAGKVAIGVIGGAGMGALMGLFLGALSDTTPPVQVIGGRDVPQAPLREQMRVVMRATAEKSRYWAGNFAFITGVFAGSECLVEKYRGKNDLWNSVASGCITGAAMQAKAGPQSAALGCGGFAAFSLVIDSFMHH 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1044.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1044.3.1 >prot_P-wetherbeei_contig1044.3.1 ID=prot_P-wetherbeei_contig1044.3.1|Name=mRNA_P-wetherbeei_contig1044.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp MAKDIGDDDSPPTVILGGGLGPLTPEQADGRPMLRNLPVLRYWPLEKTGEback to top mRNA from alignment at P-wetherbeei_contig1044:6092..7999+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1044.3.1 ID=mRNA_P-wetherbeei_contig1044.3.1|Name=mRNA_P-wetherbeei_contig1044.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1908bp|location=Sequence derived from alignment at P-wetherbeei_contig1044:6092..7999+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1044:6092..7999+ >mRNA_P-wetherbeei_contig1044.3.1 ID=mRNA_P-wetherbeei_contig1044.3.1|Name=mRNA_P-wetherbeei_contig1044.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig1044:6092..7999+ (Phaeothamnion wetherbeei SAG_119_79)back to top |