mRNA_P-wetherbeei_contig1043.1.6 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: D7FNY1_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY1_ECTSI) HSP 1 Score: 537 bits (1384), Expect = 1.500e-174 Identity = 335/635 (52.76%), Postives = 401/635 (63.15%), Query Frame = 1 Query: 1 MSHDRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRAL----AGNGRG--CQGHDRTFR-ELVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNGVGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGK-EEFLPPKEVELQMKLLWEKEWALLSLVF--GSAWRAGPKQPLG-----------VAAG----GYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDSAGLLAGAELQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLLSSPGQKVWRHLDDGDIMLVNRQ 1830 MSHDRTV+RH+VE + FGFL DD+IR +SVK+ITSP TFD LNNPLPGGLYD LGP + + CETCGQDQ++CPGH+GHIELAVSVYHP+LF LYKLLR+KCFSCH LRL+ K RV V++ML DAG A A L L L +D A D + ++ + + L L AG R C GH+R R +L ++LIK M + +CENCG SP +RKDG +KLFQ PL+ K R N+ + ++SA+Q RR+ D XXXXXXXXXXXX K + +F+PP EVELQM+ LW+ E ++L L+F G R+ P G +A G GYRLFFVR LAVPPPRFRPPM +G M+AEHPQNV+L++VL LNE L N A L G +L L W+ELQ VN +MDSSK+ RG PGLRQ VLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGT+EIGIPLRFA+ LTYPQPVA WNV MR LVE G V+PGAN+VED++GR+ L RL +R+ +AARLLSSPGQKVWRHL DGD MLVNRQ Sbjct: 1 MSHDRTVIRHAVEEIGFGFLTDDDIRRLSVKRITSPVTFDTLNNPLPGGLYDPVLGPVDKMMMCETCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKMMLVDAGRAQEALELDATLLGYL--KDGARDHDVLDGNTEDTLVSATKYRDHVLGCLEEDLAGAPRAEWCGGHNRQLRRQLAENLIKAMGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQSCNTQ-IVSAVQ---RRDPGKPNEDXXXXXXXXXXXXXXXXXXNLEDDDVGGSAPSSKVVGVSLAAAQAAAGDPATKTGAQAHKFMPPIEVELQMQQLWKLESSVLDLIFVSGRRTRSAPGDVNGPPSFSLQNANDLAGGSISDGYRLFFVRALAVPPPRFRPPMNMGDMIAEHPQNVYLTKVLNLNESLKN---------------AASLKGKDLASVLTTWVELQTTVNCYMDSSKDPRGLKDTP----PGLRQ---VLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVWRHLTDGDCMLVNRQ 607
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 528 bits (1359), Expect = 7.220e-166 Identity = 339/643 (52.72%), Postives = 413/643 (64.23%), Query Frame = 1 Query: 1 MSHDRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRAL------AGNGRGCQGHDRTFR-ELVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNGVGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGK---------EEFLPPKEVELQMKLLWEKEWALLSLVFGS------------AWRAGPKQPL-----GVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDSAGLLAGAELQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLLSSPGQKVWRHLDDGDIMLVNRQ 1830 MSHDRTV+RH+VE + FGFL DD+IR +SVK+ITSP TFD LNNPLPGGLYD LGP + + C TCGQDQ++CPGH+GHIELAVSVYHP+LF L+KLLR+KCFSCH LRL+ K RV V++ML DAG A A L L L +D A D + ++ + ++ L L A C GH+R R +L ++LIK + + +CENCG SP +RKDG +KLFQ PL+ K R N+ + ++SA+Q RR D +P + XXXXXXXXXXXXXXXXXXXXXXX +AG EF+PP EVELQM+ LW++E + L L+F S R+ Q + G + GYR FF+R+LAVPPPRFRPPM +G ++AEHPQNVHL++VL LNE L N +DS L G +L L W+ELQ VN +MDSSK+ RG PGLRQ VLEKKEGLFRKHMMGKRVNYACRSVISPDPY+GT+EIGIPLRFA+ LTYPQPVA WNV MR LVE G V+PGAN+VED++GR+ L RL +R+ +AARLLS PGQKVWRHL DGD MLVNRQ Sbjct: 1 MSHDRTVIRHAVEEIGFGFLTDDDIRKLSVKRITSPVTFDTLNNPLPGGLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALFKLLRAKCFSCHNLRLSKSKTRVAAVKMMLVDAGRAQEALELDATLLGYL--KDGAKDHDVLDGNTEDTLVSATKHRDRVLGCLEEDLADAPRADWCGGHNRQLRRQLAENLIKAIGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQTCNTQ-IVSAVQ---RR-------DPGKPNEDXXXXXXXXXXXXXXXXXXXXXXXDDIAGSAPSSKVVGVPLAAAQADAGNPAAKRGAQFHEFMPPIEVELQMQQLWKQECSTLDLIFVSDRRTRTVPGDVSGARSSSSQNVDGLHRGGISDGYRFFFMRVLAVPPPRFRPPMNMGDLIAEHPQNVHLTKVLNLNESLKN------------ADS---LKGDDLASVLTTWVELQTTVNCYMDSSKDPRGLKETP----PGLRQ---VLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSIPGQKVWRHLKDGDCMLVNRQ 608
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 464 bits (1194), Expect = 1.610e-143 Identity = 299/620 (48.23%), Postives = 380/620 (61.29%), Query Frame = 1 Query: 1 MSHDRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSV----EPVLRTHEKRLRALAGNGRGCQGHDRTFRELVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNGVGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWR-----AGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDSAGLLAGAELQRALGLWIELQDAVNVFMDSSKERR-GAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLLSSPGQKVWRHLDDGDIMLVNRQ 1830 MSHDR V+RH VE V FGFL DEIR++SVKQITSP TFDALNNPLPGGLYD ALGP++ C TCGQD CPGH+GHIELA VYHP+LFPIL+KLL++KCFSCH+LR+ + R+ V++ LCDAG+ AR+L D E AG G + E +L + + A+ R++ DD+IK + + KC+NCG SP +RKDGH+KLF +PL+ K + N +++A + + A ++P XXXXXXXXXXXXXXXXXXXXXXXXXX ++++ P E + QM+LLWEKE LLSL+F ++ + P+ G G+RLFF++ +AVPPPRFRPPM + MVAEHPQN +L++ + +N F+DSSK+ A A+ PGLRQ +LEKKEGLFRKHMMGKRVN++CRSVISPDPY+GT+EIGIP RFA+VL +PQPVA WNV +R LVE GA+ +PGANY+EDAAG+L +L R +R+ +AARLLS PGQKVWRHL D D MLVNRQ Sbjct: 1 MSHDRQVIRHKVEEVKFGFLSGDEIRAISVKQITSPLTFDALNNPLPGGLYDPALGPSQQRAVCPTCGQDHLSCPGHVGHIELAAEVYHPLLFPILFKLLKTKCFSCHKLRMNSQTCRIYAVKMALCDAGETNMARSL---------------DAEIAGGGAEANTDEGDEDLLPDKAETISAILAR-----------RQIADDVIKAIGACKKCQNCGAFSPVLRKDGHTKLFLKPLSDKMQKANN------LVAAKMGSAMQAIKDKAAAANQPGNDSDXXXXXXXXXXXXXXXXXXXXXXXXXXDEH------------------DQYVSPLEAQAQMQLLWEKEGHLLSLLFKTSMPPPKLLSAPQPVAGYDPQGFRLFFMKTIAVPPPRFRPPMVMADMVAEHPQNQYLTK---------------------------------------------NQINCFIDSSKDTSVNAKDAA----PGLRQ---ILEKKEGLFRKHMMGKRVNHSCRSVISPDPYIGTTEIGIPERFAKVLCFPQPVAAWNVEHLRTLVENGADFYPGANYIEDAAGKLINLRRQSAVQRKGMAARLLSEPGQKVWRHLQDRDAMLVNRQ 518
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: A0A421EWZ9_9STRA (DNA-directed RNA polymerase subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EWZ9_9STRA) HSP 1 Score: 404 bits (1039), Expect = 1.080e-120 Identity = 257/636 (40.41%), Postives = 350/636 (55.03%), Query Frame = 1 Query: 10 DRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRALAGNGRGCQGHDRTFR-----------ELVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNG----VGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWRAGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDSAGLLAGAE----LQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLL----SSPG------QKVWRHLDDGDIMLVNRQ 1830 D+T++RH V V FGF D EIR +SVKQ+TS +FD+LNNP+ GGLYD ALGP + + C TC Q Q+ CPGHLGHIEL V VY+P+LF +L LL+ KCF+CH+ R+A+ +RV V+++L D G A L + L ED+ R + + +RL AL+ + G R R +L + +K + + KCENCG SP VR+D +K+F + L+ + R NR V SA+ T+ +G V DDSE E + +FLPP E++ Q++L+W+ E L+ L +G + G G+R FF+ + V P RFRPP+ +G EH QN HLS+++AL+E ++ + ++Q G + SD A E L R L LW ELQ +VN+ +DSSK + G A I+Q V+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ TS+IG+PLRFA+ LTYPQPV PWNV MR LV G +VHPGAN+VE GRL DL + +R+A++ LL S+ G ++VWRHL GD++L+NRQ Sbjct: 485 DQTILRHEVAEVAFGFYSDAEIRELSVKQLTSRLSFDSLNNPVVGGLYDPALGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFNVLLTLLKRKCFTCHKFRVASASSRVIRVKILLLDNGFTDEAAQLGELLEQRNGVEDEPPQ-------RTFQRQQAILDEYERL-ALSKSNSSTYGKTRLLRPLHRSAEVQREKLATEFLKNVKN--KCENCGAISPAVRQDASAKIFLKALSARSRKVNRSKN-LTVTSALDTIRGNVSDGDDEPVNGDDSESEMEDDEDKYATTED----------------------------------STSRSKFLPPLEIQSQLQLMWQNEDGLMELFYGDR-NIASGRTTGRKPDGWRKFFLNAIPVAPSRFRPPVFMGDKQFEHAQNSHLSKIMALSESIVQGDYYKRQ-GVTNSDGDDSDAEKEEKVNLSRKLALWTELQTSVNLLVDSSKAKPGTDVAQGIKQ--------VIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRRLVINGPDVHPGANFVESETGRLIDLSKRSPHQREAISKTLLTRSASAQGTSKNRVKRVWRHLKTGDVVLMNRQ 1065
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: A0A484E7B9_BRELC (DNA-directed RNA polymerase subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7B9_BRELC) HSP 1 Score: 403 bits (1035), Expect = 1.180e-120 Identity = 249/630 (39.52%), Postives = 352/630 (55.87%), Query Frame = 1 Query: 10 DRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRALAGNGRGCQGHDR-------------TFRELVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNGVGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWRAGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDSAGLLAGAELQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLLSSPG----------QKVWRHLDDGDIMLVNRQ 1830 D+T++RH V V FGF DDEIR +SVKQI+S +FDALNNP+ GGLYD +LGP + V C TC Q Q+ CPGHLGHIEL V VY+P+LF + LL+ KCF+CH+ R A ++RV V+++L D G A L + L ED+ + I + +L +E+ LA + R C + + T +L D +K++ + KCENCG SP VR+D H+K+F + L+ + R NR + V SA+ T+ R ++ D + + + +FLPP EV+ Q++L+W+ E L+ L++G A + L + G+ FF+ ++ V P RFRPP+ +G EH QN HLS++++ + ++ TE ++ + A +L R L LWIELQ+AVN+ +DSSK + G A I+Q V+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ TS+IG+PLRFA+ LTYPQPV PWNV MR LV G ++HPGAN+VE +GRL DL + +R+A++ LL+ ++VWRHL GD++L+NRQ Sbjct: 6 DQTILRHEVAEVAFGFYSDDEIRDLSVKQISSRLSFDALNNPVLGGLYDPSLGPVDYNVICPTCRQTQKECPGHLGHIELPVPVYNPVLFSQMLTLLKRKCFTCHKFRQAGARSRVLRVKILLLDNGYVNEAAQLGELLEQRNGIEDEPSQ------RTIQRQQAILDEYER----LALSRRSCSNNGKINLLCPLPRFAEVTREKLTTDFLKSIKN--KCENCGAISPAVRQDAHAKIFLKGLSARSRKVNRSKN-QAVTSALDTI-RGSVSDYNDDLASGNVSYTNDGFVNGDDSDSAMDYDEEAVMEDL-------------------SSQSKFLPPLEVQSQLQLMWKNEDGLMELLYGDRNIANGRI-LDLKPDGWCKFFLNVIPVAPSRFRPPVFMGDKQFEHAQNSHLSKIMSFCDSIVQTENSKRHAATLEENDADNEQQVDLSRKLALWIELQNAVNLMVDSSKAKPGTEVAQGIKQ--------VIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDMHPGANFVESESGRLIDLSKRTPHQREAISKTLLTRSASALGTSKNRVKRVWRHLKTGDVVLMNRQ 593
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC) HSP 1 Score: 403 bits (1035), Expect = 1.540e-120 Identity = 278/629 (44.20%), Postives = 363/629 (57.71%), Query Frame = 1 Query: 10 DRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRA-LAGNGR----GCQGHDRTFRE-LVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGR--GTNRGLGGRGVLSAMQTM--WRREL---NGVGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWR-----AGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVG-GMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDSAGLLAGAELQRALGLWIELQDAVNVFMDSSKE---RRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLLSSPGQKVWRHLDDGDIMLVNRQ 1830 +R VVRH V V FG ++EI +SV ++++ T+D L NPLPGGLYD A+GP + C TC R CPGH+GH L++ VY+P+ F I+++ LR KCF CH RL+ F V ++L L DAG A + AD L+ AL AD+ + +LR E RLR L G+ G + R L+ D ++ + S C+ C VRKDG++K F V+GR G +RG G + SA+ + R E+ NG G DDS+ E+ XXXXXXXX EA E++ P EV++ MKLLWE E L +L++G A + P G A G++ F R+L V P RFRPP G +AEHPQN ++ +++ L+ER+ R+ GG G+ L L R L WI+LQ+AVN ++DSSK+ R G G + PG+RQ LEKKEGLFR HMMGKRVN+ACRSVISPDPY+GTSEIG+PLRFA+VLTY QPV P+N A++R VE GAE HPGANYVEDA GRL DL R+ RR+ALAARLL+ PGQ VWRHL DGD++L+NRQ Sbjct: 11 ERCVVRHDVSEVQFGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLA----HEADSLDQALFR----ADLHRS---------TILRDTEMRLRRHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTVRKDGYTKFF-----VRGRRAGHSRGAGAH-IPSALAVVRNGRHEVECGNGFG-DDSDGEESEXXXXXXXXASQERFAARGGDT-----------------------EAEGGEYMAPAEVQMHMKLLWEAEPELATLIWGKAAVEKSVFSAPGADTG-RADGWKTLFWRVLPVTPSRFRPPSKNDDGSLAEHPQNYNVIKIMNLDERIRALLRKED--GGEGATGPENLPAEALSRVLSTWIDLQNAVNGYIDSSKDANARLGGGNLT----PGIRQG---LEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQTVWRHLQDGDMVLMNRQ 582
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: H3H1S7_PHYRM (DNA-directed RNA polymerase subunit n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3H1S7_PHYRM) HSP 1 Score: 400 bits (1027), Expect = 1.340e-119 Identity = 255/634 (40.22%), Postives = 354/634 (55.84%), Query Frame = 1 Query: 10 DRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRALAGNGRGCQGHDRTFR-----------ELVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNG----VGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWRAGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDS--AGLLAGAELQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLL----SSPG------QKVWRHLDDGDIMLVNRQ 1830 D+T++RH V V FGF D EIR +SVKQ+TS +FD+LNNP+ GGLYD A+GP + + C TC Q Q+ CPGHLGHIEL V VY P+LF ++ LL+ KCF+CH+ R+A+ ++RV V+++L D G A L + L ED+ R + + +RL AL+ + G + R +L + +K M + KCENCG SP +R+D ++K+F + L+ + R NR V SA+ T+ +G + DDSE E + + +FLPP EV+ Q++L+W+ E L+ L++G A + G G+R FF+ ++ V P RFRPP+ +G EH QN HLS+++ L E ++ + ++Q G + SD A A L R L LW ELQ+AVN+ +DSSK + G A I+Q V+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ TS+IG+PLRFA+ LTYPQPV PWNV MR LV G +VHPGAN+VE GRL DL + +R+A++ LL S+ G ++VWRHL GD++L+NRQ Sbjct: 6 DQTILRHEVAEVAFGFYSDAEIRDLSVKQLTSRLSFDSLNNPVMGGLYDPAMGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYSPVLFGQMFNLLKRKCFTCHKFRVASARSRVVRVKILLLDNGFENEAAQLTELLEQRNGVEDEPPQ-------RTLQRQQAILDEYERL-ALSKSLSSTNGKTQLLRPLPRLAEVEREKLATEFLKGMKN--KCENCGAISPALRQDANAKIFLKGLSARARKVNRSKN-LTVTSALDTIRGNVSDGEADPMNGDDSESEMEDDEDKYAMTED----------------------------------SSSRSKFLPPLEVQSQLQLMWQNEDGLMELLYGDRHIASGRIS-GRKPDGWRKFFLNVVPVAPSRFRPPVFMGDKQFEHAQNSHLSKIMTLAESIVQGDYYKRQ-GATTSDEEDAEKEAQVNLSRKLALWTELQNAVNLLVDSSKAKPGTDVAQGIKQ--------VIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESENGRLIDLSKRSPHQREAISKTLLTRSASAQGTSKNRVKRVWRHLKTGDVVLMNRQ 584
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: A0A2D4BVH8_PYTIN (DNA-directed RNA polymerase subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVH8_PYTIN) HSP 1 Score: 399 bits (1025), Expect = 2.670e-119 Identity = 259/645 (40.16%), Postives = 353/645 (54.73%), Query Frame = 1 Query: 10 DRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRALAGNGRGCQGHDRTF-------------RELVDDLIKTMASVAKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWR----RELNGVGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWRAGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQR---GGSGSDSAGLLAGAE--------LQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLL----SSPG------QKVWRHLDDGDIMLVNRQ 1830 D+T++R+ V V FGF DDEIR +SVKQITS ++D LNNP+ GGLYD ALGP +M V C TC Q Q+ CPGHLGHIEL V VY+P+LF + +L+ KCF+CH+ R A+ ++RV V+++L D G A L++ L ED EP RT + R +A+ D+T +LV + +K M AKCENCG SP +R+D +K+F +PL+ + R NR + SA+ T+ RE DDSE + +FLP EV+ Q++++W E L+ L++G+ A + G A G++ FF+ ++ V P RFRPP+ + G + EH QN L ++LA++E ++ T+ Q+QQR SDS G + L R L LW ELQ A+N +DS+K R G PG++Q V+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ TS+IG+PLRFA+ LTYPQPV PWNV MR LV G +VHPGAN+VE GRL DL + +R+A++ LL S+ G ++VWRHL GD++L+NRQ Sbjct: 6 DQTILRYEVREVAFGFYSDDEIRDLSVKQITSRVSYDTLNNPVIGGLYDPALGPVDMNVLCPTCHQTQKECPGHLGHIELPVPVYNPVLFAQMLNILKRKCFTCHKFRTASARSRVLRVKILLLDNGFHEEAATLSELLEQRNGVED----------------EPPARTFQ-RQQAILDEYERLALRDKTALLAPLPRVVEVQRNKLVAEFLKGMK--AKCENCGAISPGLRQDASAKIFLKPLSARSRKVNRQKN-LTISSALDTIHGNISDREDGNDSGDDSESDMEDAGFAQAED------------------------------------STSGSKFLPTLEVQSQLQMMWRAEDGLMELLYGNRHIANGRVR-GAKAEGWKKFFLNVVPVAPSRFRPPVFMAGQMFEHAQNTALGKILAVSESIVQTDYQQQQRLQLSNKKSDSDGDETNEDEDAAPTINLARKLALWTELQTAINGLVDSTKVRDGP--------PGIKQ---VIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESETGRLIDLSKRTPHQREAISKTLLTRSASAQGSSKNRVKRVWRHLQTGDVVLMNRQ 582
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: A0A8K1FLQ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLQ6_PYTOL) HSP 1 Score: 390 bits (1002), Expect = 3.900e-116 Identity = 261/640 (40.78%), Postives = 356/640 (55.62%), Query Frame = 1 Query: 10 DRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRALAGNGRGCQGHDRTFRELVDDLIKTMASVA-----------------KCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNGVGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWRAGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNTERQRQQRGGSGSDSAGLLAGAE------LQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLL----SSPG------QKVWRHLDDGDIMLVNRQ 1830 D+T++R V V FGF +DEIR++SVKQITS +FD+LNNP+ GGLYD ALGP + V C TC Q Q+ CPGHLGHIEL V VY+P+LF + LL+ KCF+CH+ R A+ ++RV V+++L D G A L++ L ED EP RT +++ L R + ++ +D +K + VA KCENCG SP +R+D +K+F +PL+ + R NR V SA+ T +NG +D + E XXXXXXXX +FLPP EV+ Q++++W E L+ L++G + G G++ FF+ ++ V P RFRPP+ +GG + EH QN LS++L ++E ++ T+ + Q+ S SD +E L R L LW ELQ AVN +DS+K R G PG++Q V+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ TS+IG+PLRFA+ LTYPQPV PWNV MR LV G ++HPGANYVE GRL DL + +R+A++ LL S+ G ++VWRHL GD++L+NRQ Sbjct: 6 DQTILRAEVREVAFGFYSNDEIRNLSVKQITSRVSFDSLNNPVIGGLYDPALGPVDYDVLCPTCHQTQKECPGHLGHIELPVPVYNPVLFSQMLNLLKRKCFTCHKFRTASARSRVLRVKILLLDNGFHDEAAMLSELLEQRNGVED----------------EPPARTFQRQQAILDEYERLALSAVKEQKK--NDRLKPLPRVAEVQRNKLCAEFMKGMKNKCENCGAISPGIRQDASAKIFLKPLSARSRKVNRQKN-LTVSSALDT-----INGNVSDHDKDE--------------------------GDXXXXXXXXEDDSKFANAEDSTSGSKFLPPLEVQSQLQMMWRSEDGLMELLYGDR-NVANGRIRGAKPEGWKKFFLSVVPVAPSRFRPPVFMGGQMFEHAQNTALSKILTMSESIVQTDNYKPQKQKS-SDXXXXXXXSEQEVAVNLARKLALWTELQSAVNGLVDSTKVRDGP--------PGIKQ---VIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVMNGPDIHPGANYVESETGRLIDLRKRTPHQREAISKTLLTRSASAQGTSKNRVKRVWRHLQTGDVVLMNRQ 582
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Match: A0A5D6XPF2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF2_9STRA) HSP 1 Score: 390 bits (1002), Expect = 4.200e-116 Identity = 255/638 (39.97%), Postives = 354/638 (55.49%), Query Frame = 1 Query: 10 DRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLYDRALGPTEMFVPCETCGQDQRHCPGHLGHIELAVSVYHPMLFPILYKLLRSKCFSCHRLRLAAFKARVCCVQLMLCDAGDAIAARNLADELNAALTPEDDAADVEAAGAGRIGSVEPVLRTHEKRLRALAGNGRGCQGHDRTFREL--VDDLIKTMASV-------AKCENCGYQSPKVRKDGHSKLFQRPLTVKGRGTNRGLGGRGVLSAMQTMWRRELNG---VGADDSEPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAGKEEFLPPKEVELQMKLLWEKEWALLSLVFGSAWRAGPKQPLGVAAGGYRLFFVRLLAVPPPRFRPPMAVGGMVAEHPQNVHLSRVLALNERLLNT---ERQRQQRGGSGSDSAGLLAG------AELQRALGLWIELQDAVNVFMDSSKERRGAGTASIIQQPGLRQARLVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTSEIGIPLRFARVLTYPQPVAPWNVARMRGLVEAGAEVHPGANYVEDAAGRLTDLGRLPRARRQALAARLL----SSPG------QKVWRHLDDGDIMLVNRQ 1830 D+T++R+ V V FGF D EIR +SVKQ+TS +FDALNNP+ GGLYD ALGP + + C TC Q Q+ CPGHLGHIEL V VY+P+LF + LL+ KCF+CH+ R A+ ++RV V+L+L D+G A LA+ L ED+ + +L +E+ LA + G Q + R+L + ++ + + AKCENCG SP +R+D +K+F R L+ + R NR V SA+ TM ++G +G+DDS+ + + +FLPP EV+ Q++L+W+ E L+ L++G A + A G+R FF+ ++ V P RFRPP+ +G EH QN +LS++L L+E ++ E+Q+ R G+ L R L +W ELQ VN +DSS+ + GA A I+Q V+EKKEGLFRK+MMGKRVNYA RSVISPDPY+ TS+IG+PLRFA+ LTYPQPV PWNV MR LV G +VHPGAN+VE +GRL DL R +R+A++ LL S+ G ++VWRHL GDI+L+NRQ Sbjct: 6 DQTILRYEVAEVAFGFYSDAEIRELSVKQVTSRLSFDALNNPVVGGLYDPALGPVDFHMICPTCHQTQKECPGHLGHIELPVPVYNPVLFGHMLTLLKRKCFTCHKFRSASARSRVLRVKLLLIDSGFDDEAATLAELLEQRNGVEDEPQQQ------TFRRQQAILDEYER----LALSQAGAQQRGQRLRQLARLSEVQREKLAAEFFKGLKAKCENCGAISPGLRQDAKAKIFLRGLSARSRKANRSKN-LTVTSALDTM-HGNVSGDERMGSDDSDDS-------------------------------GSESELEDGKFAASEDTSSRSKFLPPLEVQSQLQLMWKNEDGLMELLYGDRNVASGRA--AAPADGWRKFFLNVIPVAPSRFRPPVFLGDKQFEHAQNSYLSKILTLSENIVQGSYYEQQKLPRAGAEDGXXXXXXXXXTAPQVNLARKLAVWTELQVNVNCLVDSSQAKAGADAAQGIKQ--------VIEKKEGLFRKNMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESESGRLIDLKRRSAHQREAISKTLLTRSASAQGTSQHRVKRVWRHLHTGDIVLMNRQ 590 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1043.1.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1043.1.6 >prot_P-wetherbeei_contig1043.1.6 ID=prot_P-wetherbeei_contig1043.1.6|Name=mRNA_P-wetherbeei_contig1043.1.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=610bp MSHDRTVVRHSVERVHFGFLHDDEIRSMSVKQITSPTTFDALNNPLPGGLback to top mRNA from alignment at P-wetherbeei_contig1043:215..3433- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1043.1.6 ID=mRNA_P-wetherbeei_contig1043.1.6|Name=mRNA_P-wetherbeei_contig1043.1.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3219bp|location=Sequence derived from alignment at P-wetherbeei_contig1043:215..3433- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1043:215..3433- >mRNA_P-wetherbeei_contig1043.1.6 ID=mRNA_P-wetherbeei_contig1043.1.6|Name=mRNA_P-wetherbeei_contig1043.1.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1830bp|location=Sequence derived from alignment at P-wetherbeei_contig1043:215..3433- (Phaeothamnion wetherbeei SAG_119_79)back to top |