mRNA_P-wetherbeei_contig10356.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Match: D7G928_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G928_ECTSI) HSP 1 Score: 174 bits (441), Expect = 7.530e-48 Identity = 98/195 (50.26%), Postives = 127/195 (65.13%), Query Frame = 2 Query: 323 KGLATTRFHKGFQRRPYRKILQDIDRRKHEELKDEARAASSEHRRRRLEALDKRNQFNIITGEHSEALLRATSPSRGVEALARRSENLSVLAAREEYVLLRDSLYRFHAPAWTGEGHDARQGTLRRQGLLAAASSSVLGVGRSEMQSFGVEDQFSKSLYDERNGCRFGGLPEACEPGCYTPRKLSAAASAARLAR 907 KGL+TTRFH+GFQRR I QD R + E LK E RR+RL +LDKRN FN+ITG+ +A R T+P V+ R + +LS +A R EY+LLRDS Y+FHAPAW+G+ HD RQ L+R+GL S++LGVG +++ S G D FSKS+YD C GL E C PG YTPRK+++A AA +R Sbjct: 4 KGLSTTRFHQGFQRRKQSNIRQDESRLQREALKQHMSVLHLERRRQRLGSLDKRNGFNLITGQF-DANRRCTTPFH-VQPRTRETGSLSEVAERAEYLLLRDSEYKFHAPAWSGKNHDERQDLLQREGLNKPKKSTLLGVGTADLASAGANDMFSKSIYDPAKTCAVEGLVETCFPGRYTPRKVTSARRAAAASR 196
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Match: A0A8J2X5L6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5L6_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.680e-30 Identity = 80/189 (42.33%), Postives = 111/189 (58.73%), Query Frame = 2 Query: 320 EKGLATTRFHKGFQRRPYRKILQDIDRRKHEELKDEARAASSEHRRRRLEALDKRNQFNIITGEHSEALLRATSPSRGVEALARRSENLSVLAAREEYVLLRDSLYRFHAPAWTGEGHDARQGTLRRQGLLAAASSSVLGVGRSEMQSFGVEDQFSKSLYDERNGCRFGGLPEACEPGCYTPRKLSAAA 886 E+GL TRF+KGF RR KI QD++R++HE L+ E + + + R RL + N F++I+GE+ A +R P R R S+ L A+ + +R+S YR + A TG+ HD RQ L +G +SVLG+GR+E S+GVEDQF+KS Y + FG L E EPG YTPRKL +A Sbjct: 79 EQGLEYTRFNKGFDRRNQSKIGQDVERKEHERLQAEKKVVTDQLRTDRLVEIKDYNGFDVISGEYDPAKIRGAHP-RARHLSDRPSKEL----AKTGEITIRNSCYRMYTAAPTGDKHDYRQHQLVSEGQSKPKFTSVLGIGRAEEPSYGVEDQFAKSQYGGKVHTDFG-LCEVREPGRYTPRKLGGSA 261
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Match: A0A7S3NGF4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGF4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.300e-20 Identity = 77/205 (37.56%), Postives = 104/205 (50.73%), Query Frame = 2 Query: 266 SSVNGGEVVTVRPKYIPIEKGLATTRFHKGFQRRPYRKILQDIDRRKHEELKDEARAASSEHRRRRLEALDKRNQFNIITGEHSEALLRATSPSRGVEALARRSENLSVLAAREEYVLLRDSLYRFHAPAWTGEG-HDARQGTLRRQGLLAAASSSVLGVGRSEMQSFGVEDQFSKSLYDERNGCRFGGLPEACEPGCYTPRKLS 877 SS++G +T K EKGL T+F GF+RR + I +R++ E++ + R S+ RR +L N++N ITG + + +A GV+ L S+ S R + +R+S YRF+ P G H RQ L GL SS+LGVGR E SFGVEDQFSKS Y R GL E +PG Y P S Sbjct: 41 SSIDGKSYLTTEEKRN--EKGLRATKFRLGFERR--QNIEPYTERKEQEKVLEGRRQVRSQIRREQLLKNSDINRYNPITGAY-DPFKKAKDERGGVKRL---SDKPSEERIRAGEIYVRNSKYRFYTPTQYGSSDHVKRQELLLSGGLSKPKFSSILGVGRDEAPSFGVEDQFSKSCYQPRQSS-LHGLVEKSKPGAYPPPHTS 236
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Match: A0A1W0A503_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A503_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.930e-12 Identity = 59/199 (29.65%), Postives = 94/199 (47.24%), Query Frame = 2 Query: 203 HAYREWEYLRHNVNGGHAGAGSSVNGGEVVTVRPKYIPIEKGLATTRFHKGFQRRPYRKILQDIDRRKHEELKDEARAASSEHRRRRLEALDKRNQFNIITGEHSEALLRATSPSRGVEALARRSENLSVLAAREEYVLLRDSLYRFHAPAWTGEGHDARQGTLRRQGLLAAASSSVLGVGRSEMQSFGVEDQFSKSLY 799 H ++ W YL+ N H +++ P+ + TT+F GF RR I D +R +HE K+ A ++++ R RL L +NI+TG S P R ++S++L E + LR+S RF+ W+ +D R L ++GL SS++G+GR+E+ SFG D +SLY Sbjct: 33 HEFKVWNYLQDPRNAPH----------DILD------PMLQSTRTTKFTPGFYRRTRTAIASDRERLEHEASKERAHSSNAVQRHGRLSYLSSSYDYNIVTGTPSTVKEVRLPPCRRYLG-DKQSDHL----VHEGTIQLRESQNRFYGNIWS---NDFRTNMLVKEGLHGPKHSSIIGIGRNELPSFGTSDGLDRSLY 207
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Match: A0A7S4DG49_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG49_HETAK) HSP 1 Score: 67.0 bits (162), Expect = 7.420e-10 Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 602 REEYVLLRDSLYRFHAPAWTGEGHDARQGTLRRQGLLAAASSSVLGVGRSEMQSFGVEDQFSKSLYDERNGCRFGGLPEACEPGCYTP 865 R + LL S RFH +GE HD RQ L R+GL+A SSVLG GR ++ S+GVEDQ +KS Y + + G E G +TP Sbjct: 24 RYQQGLLMHSHSRFHRQPPSGEQHDRRQDVLVREGLVAPKQSSVLGYGRRDVYSYGVEDQLAKSNYCPQEKIKVEGHFERNRGGRWTP 111
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Match: A0A7S2R993_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R993_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 2.010e-6 Identity = 44/108 (40.74%), Postives = 53/108 (49.07%), Query Frame = 2 Query: 602 REEYVLLRDSLYRFHAPAWTGEGHDARQGTLRRQG-----LLAAASSS---------VLGVGR--SEMQSFGVEDQFSKSLYDERNGCRFG-GLPEACEPGCYTPRKL 874 RE L S YRF P +G+ HD RQ TL G + AA + VLG R + S GVEDQFSK+LY+ R GL EA PG +TPRK+ Sbjct: 44 REAQQELARSRYRFFLPVPSGDAHDRRQETLVLDGGGRSHVRAAGGGNGKARPKLTMVLGTSRPMDSIPSHGVEDQFSKNLYELSRPPRSSVGLVEARSPGKFTPRKV 151
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Match: A0A7S2TM90_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TM90_9EUKA) HSP 1 Score: 54.3 bits (129), Expect = 4.580e-5 Identity = 54/160 (33.75%), Postives = 71/160 (44.38%), Query Frame = 2 Query: 338 TRFHKGFQRRPYRKILQDI-----DRRKHEELKDEARAASSEHRRRRLEALDKRNQFNIITGEHSEALLRATSPSRGVEALARRSENLSVLAAREEYVLLRDSLYRFHAPAWTGEGHDARQGTLRRQG----LLAAASSSVLGVGRSEMQSFGVEDQFSK 790 TRFHKGF R+ I Q + + + H+ELK R +E RR L +RN NIITG + P + S+ S A+E V + RFH P R+ LRRQ SS+LG GRSE+QS G D F++ Sbjct: 57 TRFHKGFHRKNITAIKQQVAMKMPEIQAHQELKASRRPIIAEQRRENLRRNLQRNG-NIITG--------SGMPREQYLGRKKLSDAPSKCMAKESRVRMMTGGARFHIPL----SPRGREKNLRRQQPRLRQAIKGRSSILGYGRSELQSLGTLDNFAE 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10356.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10356.1.1 >prot_P-wetherbeei_contig10356.1.1 ID=prot_P-wetherbeei_contig10356.1.1|Name=mRNA_P-wetherbeei_contig10356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp MVVSGSHEPKNSIHAVLDASYFFNKFNQPPEQAVGIRTAYREGHAYREWEback to top mRNA from alignment at P-wetherbeei_contig10356:959..2165+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10356.1.1 ID=mRNA_P-wetherbeei_contig10356.1.1|Name=mRNA_P-wetherbeei_contig10356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1207bp|location=Sequence derived from alignment at P-wetherbeei_contig10356:959..2165+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10356:959..2165+ >mRNA_P-wetherbeei_contig10356.1.1 ID=mRNA_P-wetherbeei_contig10356.1.1|Name=mRNA_P-wetherbeei_contig10356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig10356:959..2165+ (Phaeothamnion wetherbeei SAG_119_79)back to top |