mRNA_P-wetherbeei_contig10241.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.290e-24 Identity = 45/76 (59.21%), Postives = 62/76 (81.58%), Query Frame = 1 Query: 49 SKKLEAPANFSGATDRKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYYV 276 S+KL+AP NF G RKCTD LF +++V W+AMTV+GI++VQ G+P+ L+NG+DY+GRICG +GVE LTK+YY+ Sbjct: 6 SQKLQAPPNFDGPVKRKCTDTLFMLVLVCCWIAMTVIGIKAVQTGNPDRLVNGIDYQGRICGVDAGVETLTKMYYI 81
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 2.040e-20 Identity = 37/74 (50.00%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 55 KLEAPANFSGATDRKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYYV 276 KL AP + G DR+CTDVLF ++++ W+AMT +G++ + G+P++L+NG+DY GRICG GV+D +KLYY+ Sbjct: 17 KLAAPDDIEGGADRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYI 90
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: D7G036_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G036_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 2.310e-19 Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 55 KLEAPANFSGAT-DRKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYY 273 KL AP F G DRKCTD++F++ I+ MW+ MTVVGI SVQ+GD L+ DY+G +CG G ED KLYY Sbjct: 4 KLTAPPEFDGPVRDRKCTDIIFTLAIIIMWITMTVVGISSVQQGDVRELLAPTDYEGNLCGFDDGYEDRGKLYY 77
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 3.380e-19 Identity = 35/71 (49.30%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 64 APANFSGATDRKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYYV 276 AP + G DR+CTDVLF ++++ W+AMT +G++ + G+P++L+NG+DY GRICG GV+D +KLYY+ Sbjct: 4 APDDIEGGADRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYI 74
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK) HSP 1 Score: 84.3 bits (207), Expect = 4.910e-17 Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 28 RDETVETSKKLEAPANFSGATD-RKCTDVLFSVLIVGMWVAMTVVGI--------ESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYYV 276 +D+ +KKLE A+F+G + RKCTD+LF +LI+ WVAMT +G +++ G+PE LING+DY+G ICG SGV+ +K+YY+ Sbjct: 60 KDKEHPDNKKLEHSADFAGPCEKRKCTDILFLLLIIACWVAMTFLGFVVTGAIPSDTLDAGNPERLINGIDYEGNICGVDSGVKSKSKIYYL 151
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A6V2WBV2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WBV2_HETAK) HSP 1 Score: 82.4 bits (202), Expect = 2.310e-16 Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 1 Query: 52 KKLEAPAN---FSGAT-DRKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYYV 276 ++L+APA + G T +RKCTDVLF + IV WV MT+VG++S+Q GD +L NG+DY G ICG + D +K+YYV Sbjct: 20 ERLKAPAGRDEYEGPTANRKCTDVLFFIAIVATWVCMTIVGVDSIQNGDYAVLTNGIDYNGNICG-TGNYSDYSKMYYV 97
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK) HSP 1 Score: 82.4 bits (202), Expect = 2.320e-16 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 28 RDETVETSKKLEAPANFSGATD-RKCTDVLFSVLIVGMWVAMTVVGI--------ESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYYV 276 +D +KKLE A+F G + RKCTD+LF +L++ WVAMT +G ++++ G+P+ LING+DY G ICG S V D +K+YY+ Sbjct: 8 KDRNDPANKKLEGGADFPGPCEKRKCTDILFLLLLIACWVAMTFLGFVVCGVIPNDNLEPGNPQRLINGIDYNGHICGVDSAVSDKSKIYYL 99
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A7S2XXR1_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR1_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.880e-16 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 40 VETSKKLEAPANFSGATD-RKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYYV 276 ++ +KKL F G TD RKCTD+LF +LI+ W+ +T +G +S GDP LI VDY GR+CG SSGVED +YY+ Sbjct: 14 IDPNKKLSGDG-FQGPTDQRKCTDILFLILIILAWIILTAIGSDSCVHGDPWTLIAQVDYGGRVCGYSSGVEDSENIYYL 92
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A7S2UHE9_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHE9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.730e-15 Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 28 RDETVETSKKLEAPANFSGATD-RKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTK---LYYV 276 RDE E + KLEAPA+F G TD R CTD++ S+LIV MW+AM+ VG +V GD ++N +DY G ICG G D+T+ LYYV Sbjct: 8 RDE--EGTDKLEAPADFDGPTDDRHCTDIVCSILIVIMWIAMSGVGAYAVTNGDYRKILNPLDYDGNICGTDFGGVDMTEYPYLYYV 92
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 2.790e-15 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 55 KLEAPANFSGAT-DRKCTDVLFSVLIVGMWVAMTVVGIESVQEGDPEILINGVDYKGRICGKSSGVEDLTKLYY 273 KL A F G +RKCTD++F + I+ MW+ MT VGI S+Q+GD L+ DY+G +CG G EDL KLYY Sbjct: 7 KLTASPEFDGPVRERKCTDIIFMLAIIIMWITMTAVGISSIQQGDVRELLAPTDYEGNLCGFDDGYEDLGKLYY 80 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10241.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10241.1.1 >prot_P-wetherbeei_contig10241.1.1 ID=prot_P-wetherbeei_contig10241.1.1|Name=mRNA_P-wetherbeei_contig10241.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp MGNGGSAGGRDETVETSKKLEAPANFSGATDRKCTDVLFSVLIVGMWVAMback to top mRNA from alignment at P-wetherbeei_contig10241:1329..1604+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10241.1.1 ID=mRNA_P-wetherbeei_contig10241.1.1|Name=mRNA_P-wetherbeei_contig10241.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig10241:1329..1604+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10241:1329..1604+ >mRNA_P-wetherbeei_contig10241.1.1 ID=mRNA_P-wetherbeei_contig10241.1.1|Name=mRNA_P-wetherbeei_contig10241.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig10241:1329..1604+ (Phaeothamnion wetherbeei SAG_119_79)back to top |