prot_P-canaliculata_contig102336.369.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102336.369.1
Unique Nameprot_P-canaliculata_contig102336.369.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length200
Homology
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BLAST of mRNA_P-canaliculata_contig102336.369.1 vs. uniprot
Match: W0JAI8_9BACT (Anchor protein n=1 Tax=Opitutaceae bacterium TAV5 TaxID=794903 RepID=W0JAI8_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.900e-5
Identity = 65/216 (30.09%), Postives = 92/216 (42.59%), Query Frame = 0 
Query:    1 FGTQTLAALGDSISVTFDVAYVGLDDPENQA----FRYGLGGDADTTNGFQFYVVQAANGTATEGQVARDPGNDTSQLGGGGQVFLANQNN-ADPAGSFAIQGTDVNTVTLTLERITIDDIDRINFTTSISVDGAEIASITRDE-----TLNRAGDSQFVFDTLAIGKGGSGDNYLVDNIVVTSNIAPIPEPGTLALTAFGAAALL------RRRR 200
            F   TL+++GD ISV+FDV + G+ D   Q     F  G   DA+   G     V    G A                   GQ F  ++   A  +G+  + G+   T T+     T     ++ FT +++  G E+A+I  D      TL          DTL +  GG       DNI VT+N +P+PEP T+A+   GAA L       RRRR
Sbjct:  107 FDAVTLSSVGDFISVSFDV-FSGVTDGTKQLQVGFFDLGTKLDANLLPGDD--PVAGKTGYAY------------------GQGFTTDRGTYALKSGASNVTGSTGGTGTIEGALFTASADHKLTFTLTMTAAGLELATIFDDRSMSSYTLESLAGGSITVDTLWLLTGGVASTVNFDNITVTTNTSPVPEPATVAMF-LGAAVLATAFIASRRRR 300
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102336.369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
W0JAI8_9BACT1.900e-530.09Anchor protein n=1 Tax=Opitutaceae bacterium TAV5 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013424PEP-CTERM protein-sorting domainPFAMPF07589PEP-CTERMcoord: 178..200
e-value: 1.6E-4
score: 21.6
IPR013424PEP-CTERM protein-sorting domainTIGRFAMTIGR02595TIGR02595coord: 179..200
e-value: 9.4E-5
score: 21.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102336contigP-canaliculata_contig102336:313..912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102336.369.1mRNA_P-canaliculata_contig102336.369.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102336 313..912 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102336.369.1 ID=prot_P-canaliculata_contig102336.369.1|Name=mRNA_P-canaliculata_contig102336.369.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=200bp
FGTQTLAALGDSISVTFDVAYVGLDDPENQAFRYGLGGDADTTNGFQFYV
VQAANGTATEGQVARDPGNDTSQLGGGGQVFLANQNNADPAGSFAIQGTD
VNTVTLTLERITIDDIDRINFTTSISVDGAEIASITRDETLNRAGDSQFV
FDTLAIGKGGSGDNYLVDNIVVTSNIAPIPEPGTLALTAFGAAALLRRRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013424PEP_exosort_dom