prot_P-canaliculata_contig101956.287.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig101956.287.1
Unique Name	prot_P-canaliculata_contig101956.287.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	108

Homology

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A0S0GLI0_COSCS (Ycf66 n=28 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0GLI0_COSCS)

HSP 1 Score: 192 bits (488), Expect = 9.280e-62
Identity = 99/105 (94.29%), Postives = 104/105 (99.05%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPKIYSDK 105
            M+NIVFGANFLLGLIIILGVLI+YFLRI+RPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKE+L LPKIYS+K
Sbjct:    1 MINIVFGANFLLGLIIILGVLILYFLRIIRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEQLKLPKIYSNK 105

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A8F0F7Z8_9PHAE (Uncharacterized protein n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0F7Z8_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.080e-60
Identity = 97/105 (92.38%), Postives = 103/105 (98.10%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPKIYSDK 105
            M+NI FGANFLLGLIIILGVLI+YFLRI+RPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKE+L LPKIYS++
Sbjct:    1 MINIAFGANFLLGLIIILGVLILYFLRIIRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEQLKLPKIYSNR 105

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A8E6D4V4_9PHAE (Uncharacterized protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D4V4_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 3.260e-56
Identity = 88/106 (83.02%), Postives = 99/106 (93.40%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPKIYSDKL 106
            MVNI FGANF+LGL+++ GVLI+YFLR+++PE++RDEDIFFTTLGLIY  ILIIHGWRLDPILLFSQVLLVS+ LAAGWENIRLRGLIAKKIKEKL LPKIY DKL
Sbjct:    1 MVNITFGANFILGLLVMTGVLILYFLRMIKPEVARDEDIFFTTLGLIYSCILIIHGWRLDPILLFSQVLLVSLCLAAGWENIRLRGLIAKKIKEKLKLPKIYEDKL 106

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A109QSJ6_9PHAE (Ycf66 n=13 Tax=Fucales TaxID=3009 RepID=A0A109QSJ6_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 7.490e-56
Identity = 89/102 (87.25%), Postives = 96/102 (94.12%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPKIY 102
            M+NIVFGANFLLGLIII+GVL++YFLRI+RPEL RDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVS+ L AGWENIRLRGLIAKKIKE+L LP  Y
Sbjct:    1 MINIVFGANFLLGLIIIIGVLLLYFLRIIRPELCRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSVVLVAGWENIRLRGLIAKKIKEQLELPDYY 102

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A141BSB5_9PHAE (Ycf66 n=3 Tax=Sargassum TaxID=3015 RepID=A0A141BSB5_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 3.050e-55
Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPKIY 102
            M+NIVFGANFLLGLI I+GVL++YFLRI+RPEL RDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVS+ L AGWENIRLRGLIAKKIKE+L LP  Y
Sbjct:    1 MINIVFGANFLLGLITIIGVLLLYFLRIIRPELCRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSVVLVAGWENIRLRGLIAKKIKEQLELPDFY 102

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: D1J770_ECTSI (Uncharacterized protein ycf66 n=7 Tax=Ectocarpales TaxID=2877 RepID=D1J770_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 5.220e-52
Identity = 85/95 (89.47%), Postives = 92/95 (96.84%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEK 95
            M+NIVFGANFLLGL+IILGVLI+YFLR VRPELSRDEDIFFTTLGLIYG+ILIIHGWRLDPILLFSQVLLVS+ LAAGWENIRLRGLIA K+K+K
Sbjct:    1 MINIVFGANFLLGLLIILGVLILYFLRSVRPELSRDEDIFFTTLGLIYGAILIIHGWRLDPILLFSQVLLVSLVLAAGWENIRLRGLIAAKLKKK 95

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A1N7TJI4_9PHAE (Ycf66 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1N7TJI4_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 7.770e-52
Identity = 85/107 (79.44%), Postives = 93/107 (86.92%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPKIYSDKLN 107
            M+NIVFGANFLLGLIII+GVL++YFLRI+RPEL RDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVS+ L AGWENIRLRGLIAKK++   N        LN
Sbjct:    1 MINIVFGANFLLGLIIIIGVLLLYFLRIIRPELCRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSVVLVAGWENIRLRGLIAKKLRNNYNYQTFILINLN 107

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A7S6ZP91_9STRA (Ycf66 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZP91_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.430e-47
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPK 100
            M+NI FGAN +LG  +ILG+L++YF+RIVRPELSRDEDIFF TLGLIY  ILIIHGWRLDPILLFSQVL++SI L+ GWENIRLRGLIAKKIK+++  PK
Sbjct:    1 MINIGFGANLVLGFFVILGMLLLYFVRIVRPELSRDEDIFFATLGLIYSCILIIHGWRLDPILLFSQVLIISIILSTGWENIRLRGLIAKKIKDQITYPK 100

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: B7T208_VAULI (Uncharacterized protein ycf66 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T208_VAULI)

HSP 1 Score: 150 bits (378), Expect = 5.640e-45
Identity = 74/105 (70.48%), Postives = 91/105 (86.67%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKL-NLPKIYSD 104
            M+NI FG N +LG + ++GV ++Y +RIVRPELSRDEDIFFTTLGLIY  ILIIHGWRLDPILLFSQVL+++I+LAAGWENIRLRGL+AKKIK+++ N    YS+
Sbjct:    1 MINIGFGTNLILGFLFVIGVTLLYLVRIVRPELSRDEDIFFTTLGLIYSCILIIHGWRLDPILLFSQVLILAISLAAGWENIRLRGLVAKKIKDQIINATTEYSE 105

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BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Match: A0A2U9NTG2_9STRA (Hypothetical chloroplast RF66 n=1 Tax=Acanthoceras zachariasii TaxID=451788 RepID=A0A2U9NTG2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 6.900e-40
Identity = 66/97 (68.04%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGSILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAK--KIKEK 95
            M+NI FG N +LGLI+  GV+++YFLR+V+PE++RDEDIFF T+GL+Y  ILI+HGWRLDPILLFSQVL++S  L AGWENIRLRGL+A   KIK+K
Sbjct:    1 MINIGFGPNIILGLILAFGVILLYFLRVVKPEVARDEDIFFATIGLLYSCILIVHGWRLDPILLFSQVLIISSLLVAGWENIRLRGLLANIAKIKKK 97

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig101956.287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0S0GLI0_COSCS	9.280e-62	94.29	Ycf66 n=28 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S...	[more]
A0A8F0F7Z8_9PHAE	1.080e-60	92.38	Uncharacterized protein n=3 Tax=Phaeophyceae TaxID...	[more]
A0A8E6D4V4_9PHAE	3.260e-56	83.02	Uncharacterized protein n=1 Tax=Ishige okamurae Ta...	[more]
A0A109QSJ6_9PHAE	7.490e-56	87.25	Ycf66 n=13 Tax=Fucales TaxID=3009 RepID=A0A109QSJ6...	[more]
A0A141BSB5_9PHAE	3.050e-55	86.27	Ycf66 n=3 Tax=Sargassum TaxID=3015 RepID=A0A141BSB...	[more]
D1J770_ECTSI	5.220e-52	89.47	Uncharacterized protein ycf66 n=7 Tax=Ectocarpales...	[more]
A0A1N7TJI4_9PHAE	7.770e-52	79.44	Ycf66 n=1 Tax=Coccophora langsdorfii TaxID=74099 R...	[more]
A0A7S6ZP91_9STRA	2.430e-47	76.00	Ycf66 n=1 Tax=Schizocladia ischiensis TaxID=196139...	[more]
B7T208_VAULI	5.640e-45	70.48	Uncharacterized protein ycf66 n=1 Tax=Vaucheria li...	[more]
A0A2U9NTG2_9STRA	6.900e-40	68.04	Hypothetical chloroplast RF66 n=1 Tax=Acanthoceras...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010004	Uncharacterised protein family Ycf66	PFAM	PF07444	Ycf66_N	coord: 10..85 e-value: 2.8E-28 score: 97.8
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 27..37
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 63..82
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 58..62
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 38..57
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 83..107
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..26
None	No IPR available	TMHMM	TMhelix		coord: 4..26
None	No IPR available	TMHMM	TMhelix		coord: 39..57
None	No IPR available	TMHMM	TMhelix		coord: 62..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig101956	contig	P-canaliculata_contig101956:515..838 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig101956.287.1	mRNA_P-canaliculata_contig101956.287.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig101956 515..838 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig101956.287.1 ID=prot_P-canaliculata_contig101956.287.1|Name=mRNA_P-canaliculata_contig101956.287.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=108bp
MVNIVFGANFLLGLIIILGVLIVYFLRIVRPELSRDEDIFFTTLGLIYGS
ILIIHGWRLDPILLFSQVLLVSIALAAGWENIRLRGLIAKKIKEKLNLPK
IYSDKLN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010004	Uncharacterised_Ycf66