prot_P-canaliculata_contig10183.270.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig10183.270.1
Unique Name	prot_P-canaliculata_contig10183.270.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	210

Homology

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: A0A6H5KTD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD1_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 4.910e-90
Identity = 142/208 (68.27%), Postives = 171/208 (82.21%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVKPHTPKGVRGSSLLRLLLLGPLAAVGRFAS 208
            +VV LES GGEV+EFGL AA+LARL+++GFRLTVCVDK +   GGYMMAC+AD +  APFAMLGSIGVVGG+ NFNKAL+K G++YF FTSGQ KSLVGPFQEVT+ N+AMQQ Q+D++H+AFK HV RYRPSV++E VGTGE+WLG  A +  L D+V T M+YL+ RM+D+QVF+VKPH  K   GSSLLR LL GPLA  GRFAS
Sbjct:  201 VVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAAS-GGYMMACIADELTTAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHTAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVEMHLADKVTTAMEYLQGRMSDAQVFLVKPHKKKMAAGSSLLRELLFGPLAISGRFAS 407

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: D7G353_ECTSI (Putative periplasmic protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G353_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 4.350e-88
Identity = 144/208 (69.23%), Postives = 171/208 (82.21%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVKPHTPKGVRGSSLLRLLLLGPLAAVGRFAS 208
            +VV LES GGEV+EFGL AA+LARL+++GFRLTVCVDK +   GGYM+AC+AD +  APFAMLGSIGVVGG+ NFNKAL+K G++YFHFTSGQ KSLVGPFQEVT+ N+AMQQ Q+D++HSAFK HV RYRPSV++E VGTGE+WLG  A   RL D+V T M+YL+ RM D+QVF+VKPH  K   GS LLR LLLGPLA  GRFAS
Sbjct:  573 VVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAAS-GGYMIACIADELTTAPFAMLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHSAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVDMRLADKVTTAMEYLQGRMTDAQVFLVKPHKKKMAAGSGLLRELLLGPLAVSGRFAS 779

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: A0A7V1FTF3_9GAMM (Protease SohB n=2 Tax=root TaxID=1 RepID=A0A7V1FTF3_9GAMM)

HSP 1 Score: 172 bits (437), Expect = 2.460e-49
Identity = 92/178 (51.69%), Postives = 122/178 (68.54%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVV 178
            +VV LESGGG V  +GL A++L R+R+ G  LTVCVDK +   GGYMMAC+AD ++AAPFAMLGSIGVV  IPNFN+ LRK  I+Y   T+G+ K  +  F E +   +   Q  L+++H  FK  V RYRPS++VE V TGEVW GL+A  ++L DE+ T+ QY+  R+  + VF V
Sbjct:  126 IVVKLESGGGMVHAYGLAASQLTRVRDAGVPLTVCVDKVAAS-GGYMMACIADRILAAPFAMLGSIGVVAQIPNFNRILRKHDIDYEMLTAGEYKRTLTLFGENSEKGREKFQEDLENIHRLFKGFVGRYRPSLDVEAVATGEVWFGLEAVDNQLADEIKTSDQYISQRVGQADVFEV 302

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: W8G4T4_9GAMM (Peptidase n=6 Tax=root TaxID=1 RepID=W8G4T4_9GAMM)

HSP 1 Score: 173 bits (438), Expect = 2.540e-49
Identity = 87/179 (48.60%), Postives = 123/179 (68.72%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVK 179
            +VV LESGGG V  +G GA++L R+R++G  LTVCVD  +   GGYMMAC+AD ++AAPFA++GSIGVV  +PNF+K L+K  ++Y  FT+G+ K  V  F E T   +   Q+ L+  H  FK HV+ +RP V++E V TG++W G+ A  H+LIDEVGT+  YL A   ++ V+ V+
Sbjct:  139 VVVRLESGGGMVHSYGFGASQLKRIRDRGIHLTVCVDMVAAS-GGYMMACLADRIVAAPFAIIGSIGVVAQLPNFSKVLKKYDVDYELFTAGEYKRTVTMFGENTDKAKEKFQADLEETHDLFKHHVKHHRPRVDIEAVATGDIWYGVQAIDHKLIDEVGTSDDYLVAACDNADVYTVR 316

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: A0A558NM97_9GAMM (Protease SohB n=2 Tax=Thalassolituus TaxID=187492 RepID=A0A558NM97_9GAMM)

HSP 1 Score: 172 bits (436), Expect = 4.920e-49
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVKPHTPKGVR 187
            +VV LESGGG V  +GLGA++L R+R++G  LTVCVDK +   GGYMMAC+A+ +IAAPFA++GSIGVV  +PNFN+ L+K  ++Y  FT+G+ K  V  F   +   +   QS L+  H  FK+HV+  RP +++E V TG++W G  A  HRLID+VGT+  YL A  A+S V+ V+    K ++
Sbjct:  138 IVVRLESGGGMVHTYGLGASQLKRIRDRGIPLTVCVDKVAAS-GGYMMACLANRIIAAPFAIVGSIGVVAQLPNFNRLLKKHDVDYELFTAGEYKRTVTMFGHNSAKAKDKFQSDLEDTHELFKQHVKHSRPRIDIEAVATGDIWYGQQALDHRLIDDVGTSDDYLVAACANSDVYSVRYEYKKSLQ 323

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: A0A1I6AFY4_9GAMM (Serine protease SohB n=1 Tax=Halopseudomonas formosensis TaxID=1002526 RepID=A0A1I6AFY4_9GAMM)

HSP 1 Score: 171 bits (433), Expect = 9.750e-49
Identity = 93/203 (45.81%), Postives = 132/203 (65.02%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVKPHTPKGVR-------GSSLLRLLL 196
            +V+ LESGGG V  +GL A++L R+R+ G  LT+CVDK +   GGYMMAC+ D V+AAPFAMLGSIGVV  +PNF++ L+K  ++Y   T+G+ K  +  F E T   +   Q  L+++H  FK+ V RYRP +NV+EV TGEVW G +A +  L DE+ T+ +Y+  R+  + VF V  H PK ++        ++L RLLL
Sbjct:  126 IVLRLESGGGMVHAYGLAASQLTRVRDAGVPLTICVDKVAAS-GGYMMACIGDRVLAAPFAMLGSIGVVAQLPNFHRVLKKHDVDYEMLTAGEYKRTLTLFGENTEKGREKFQEDLENIHRLFKQFVSRYRPVLNVDEVATGEVWFGTEALQKALADEIRTSDEYISQRIRQADVFEVHFHRPKKLQDRLSSTMSAALDRLLL 327

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: A0A2G2JIC9_9GAMM (Protease SohB n=1 Tax=Oceanobacter sp. TaxID=2030817 RepID=A0A2G2JIC9_9GAMM)

HSP 1 Score: 171 bits (434), Expect = 1.030e-48
Identity = 87/179 (48.60%), Postives = 122/179 (68.16%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVK 179
            +VV LESGGG V  +GL +++L R+R+KG  LT+C+D+ +   GGYMMAC+AD V+AAPFA++GSIGVV  +PNFNK LRK  +++  FT+G+ K  V  F E T + +   Q+ L+  H  FK HV+ YRP V++E V TG++W G  A   +LIDEVGT+  YL A    + V+ V+
Sbjct:  140 IVVRLESGGGMVHSYGLASSQLKRIRDKGIHLTICIDRVAAS-GGYMMACLADRVVAAPFAIVGSIGVVAQLPNFNKLLRKNDVDFELFTAGEYKRTVTMFGENTDSAREKFQADLEDTHELFKNHVKHYRPRVDIEAVATGDIWYGQQALDQKLIDEVGTSDDYLVAACERADVYTVR 317

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: UPI001D010463 (protease SohB n=1 Tax=Pseudomonas sp. FME51 TaxID=2742609 RepID=UPI001D010463)

HSP 1 Score: 171 bits (433), Expect = 1.280e-48
Identity = 96/203 (47.29%), Postives = 134/203 (66.01%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVKPHTPKGVR-------GSSLLRLLL 196
            +VV LESGGG V  +GL A++LAR+RE G  LTVCVDK +   GGYMMAC+AD V+AAPFAMLGSIGVV  +PNF++ L+K  IEY   T+G+ K  +  F E T   +   Q  L+++H  FK+ V RYRP ++++ V TGEVW G +A ++ L DE+ T+ +Y+  R+  + VF V  + PK ++        ++L RLLL
Sbjct:  137 IVVKLESGGGMVHAYGLAASQLARIREAGVPLTVCVDKVAAS-GGYMMACIADRVLAAPFAMLGSIGVVAQLPNFHQVLKKHDIEYEMLTAGEYKRTLTLFGENTEKGREKFQEDLENIHRLFKQFVARYRPVLDIDSVATGEVWFGSEALENALADELKTSDEYISQRIRQADVFEVHFNRPKRLQDKLSSSVSAALDRLLL 338

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: A0A1H1RUD4_9GAMM (Inner membrane peptidase. Serine peptidase. MEROPS family S49 n=1 Tax=Halopseudomonas xinjiangensis TaxID=487184 RepID=A0A1H1RUD4_9GAMM)

HSP 1 Score: 171 bits (432), Expect = 1.380e-48
Identity = 90/184 (48.91%), Postives = 124/184 (67.39%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVVKPHTPK 184
            +VV LESGGG V  +GL A++L R+RE G  LTVCVDK +   GGYMMAC+ D ++AAPFAMLGSIGVV  +PNF+K L+K  ++Y   T+G+ K  +  F E T   +   +  L+++H  FK  V RYRP +NV+EV TGEVW G++A + +L DEV T+ +Y+  R+ ++ VF V   T K
Sbjct:  126 VVVKLESGGGMVHAYGLAASQLVRIREAGIPLTVCVDKVAAS-GGYMMACIGDRLLAAPFAMLGSIGVVAQLPNFHKILKKHDVDYEMLTAGEYKRTLTVFGENTEKGREKFREDLENIHRLFKNFVSRYRPQLNVDEVATGEVWFGIEAQEIKLADEVQTSDEYITRRVREADVFEVNYVTRK 308

[Close]

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Match: A0A2E0A2M0_9GAMM (Protease SohB n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A2E0A2M0_9GAMM)

HSP 1 Score: 171 bits (433), Expect = 1.380e-48
Identity = 87/178 (48.88%), Postives = 124/178 (69.66%), Query Frame = 0

Query:    1 MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMACVADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGPFQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDAAKHRLIDEVGTTMQYLEARMADSQVFVV 178
            +VV LESGGG V  +GL A++L R+R+KG  LT+C+D+ +   GGYMMAC+A+ ++AAPFA++GSIGVV  +PNFNK L+K  I+Y  FT+G+ K  +  F E T   +   QS L+  H  FK HV+++RP V+++ + TG+VW G+ A   +LIDEVGT+  YL +   DS VF+V
Sbjct:  138 VVVRLESGGGMVHSYGLAASQLKRIRDKGISLTICIDRVAAS-GGYMMACLANRMVAAPFAIIGSIGVVAQVPNFNKLLKKNDIDYELFTAGEFKRTITMFGENTDKAREKFQSDLEDTHGLFKAHVKQFRPRVDIDAIATGDVWYGIQAIDLKLIDEVGTSDDYLMSACNDSDVFMV 314

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig10183.270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KTD1_9PHAE	4.910e-90	68.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G353_ECTSI	4.350e-88	69.23	Putative periplasmic protease n=1 Tax=Ectocarpus s...	[more]
A0A7V1FTF3_9GAMM	2.460e-49	51.69	Protease SohB n=2 Tax=root TaxID=1 RepID=A0A7V1FTF...	[more]
W8G4T4_9GAMM	2.540e-49	48.60	Peptidase n=6 Tax=root TaxID=1 RepID=W8G4T4_9GAMM	[more]
A0A558NM97_9GAMM	4.920e-49	48.13	Protease SohB n=2 Tax=Thalassolituus TaxID=187492 ...	[more]
A0A1I6AFY4_9GAMM	9.750e-49	45.81	Serine protease SohB n=1 Tax=Halopseudomonas formo...	[more]
A0A2G2JIC9_9GAMM	1.030e-48	48.60	Protease SohB n=1 Tax=Oceanobacter sp. TaxID=20308...	[more]
UPI001D010463	1.280e-48	47.29	protease SohB n=1 Tax=Pseudomonas sp. FME51 TaxID=...	[more]
A0A1H1RUD4_9GAMM	1.380e-48	48.91	Inner membrane peptidase. Serine peptidase. MEROPS...	[more]
A0A2E0A2M0_9GAMM	1.380e-48	48.88	Protease SohB n=2 Tax=Oceanospirillales TaxID=1356...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.226.10		coord: 2..164 e-value: 1.3E-34 score: 121.2
None	No IPR available	GENE3D	3.40.1750.20		coord: 67..132 e-value: 1.3E-34 score: 121.2
None	No IPR available	PANTHER	PTHR42987:SF1	PROTEASE SOHB-RELATED	coord: 2..179
None	No IPR available	PANTHER	PTHR42987	FAMILY NOT NAMED	coord: 2..179
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..45
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 73..190
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 209..209
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 191..208
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..72
None	No IPR available	TMHMM	TMhelix		coord: 54..76
IPR002142	Peptidase S49	PFAM	PF01343	Peptidase_S49	coord: 27..173 e-value: 1.2E-31 score: 109.8
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 2..161

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig10183	contig	P-canaliculata_contig10183:7848..11448 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig10183.270.1	mRNA_P-canaliculata_contig10183.270.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig10183 7848..11457 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig10183.270.1 ID=prot_P-canaliculata_contig10183.270.1|Name=mRNA_P-canaliculata_contig10183.270.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=210bp
MVVCLESGGGEVSEFGLGAAKLARLREKGFRLTVCVDKASKEAGGYMMAC
VADWVIAAPFAMLGSIGVVGGIPNFNKALRKAGIEYFHFTSGQQKSLVGP
FQEVTRANQAMQQSQLDSVHSAFKRHVRRYRPSVNVEEVGTGEVWLGLDA
AKHRLIDEVGTTMQYLEARMADSQVFVVKPHTPKGVRGSSLLRLLLLGPL
AAVGRFASR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002142	Peptidase_S49
IPR029045	ClpP/crotonase-like_dom_sf