prot_P-canaliculata_contig101693.262.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101693.262.1
Unique Nameprot_P-canaliculata_contig101693.262.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length134
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig101693.262.1 vs. uniprot
Match: A0A540X8Q5_9DELT (Uncharacterized protein n=7 Tax=Myxococcus TaxID=32 RepID=A0A540X8Q5_9DELT)

HSP 1 Score: 88.6 bits (218), Expect = 1.510e-19
Identity = 51/135 (37.78%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:    1 NFGQHWRSGNIVPVTYSVTLPSTLFAELVDTGLPELVYDMKKFPESCDEYEQLLRVHNWPETTEKIMLDNTLAIKTLAWFGHEMMLRWLGDREPSKTPGFVFNTIESTTFNGHNPVIVGLGRMAGQAVDF--QDV 133
            NF Q WR+  I  V Y V LP      L++   P LV D ++FP   D  +Q LR   WPE   + ++D   A + LA+F HE++LRW  D  P+  PGFV N++E T   G +  + G  R     V +  QDV
Sbjct:   38 NFNQPWRTPGITEVRYEVILPGQYAVALLERDWPGLVSDYQRFPAPDDPLDQALRALEWPEPA-RALVDPVAAPRILAFFAHELLLRWFDDGLPAG-PGFVLNSVEETGMAGTDVYLAGHARPHDPRVSYVYQDV 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101693.262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A540X8Q5_9DELT1.510e-1937.78Uncharacterized protein n=7 Tax=Myxococcus TaxID=3... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101693contigP-canaliculata_contig101693:604..1005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101693.262.1mRNA_P-canaliculata_contig101693.262.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101693 604..1005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101693.262.1 ID=prot_P-canaliculata_contig101693.262.1|Name=mRNA_P-canaliculata_contig101693.262.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=134bp
NFGQHWRSGNIVPVTYSVTLPSTLFAELVDTGLPELVYDMKKFPESCDEY
EQLLRVHNWPETTEKIMLDNTLAIKTLAWFGHEMMLRWLGDREPSKTPGF
VFNTIESTTFNGHNPVIVGLGRMAGQAVDFQDV*
back to top