mRNA_P-canaliculata_contig101693.262.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig101693.262.1 vs. uniprot
Match: A0A540X8Q5_9DELT (Uncharacterized protein n=7 Tax=Myxococcus TaxID=32 RepID=A0A540X8Q5_9DELT) HSP 1 Score: 88.6 bits (218), Expect = 1.510e-19 Identity = 51/135 (37.78%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 1 NFGQHWRSGNIVPVTYSVTLPSTLFAELVDTGLPELVYDMKKFPESCDEYEQLLRVHNWPETTEKIMLDNTLAIKTLAWFGHEMMLRWLGDREPSKTPGFVFNTIESTTFNGHNPVIVGLGRMAGQAVDF--QDV 399 NF Q WR+ I V Y V LP L++ P LV D ++FP D +Q LR WPE + ++D A + LA+F HE++LRW D P+ PGFV N++E T G + + G R V + QDV Sbjct: 38 NFNQPWRTPGITEVRYEVILPGQYAVALLERDWPGLVSDYQRFPAPDDPLDQALRALEWPEPA-RALVDPVAAPRILAFFAHELLLRWFDDGLPAG-PGFVLNSVEETGMAGTDVYLAGHARPHDPRVSYVYQDV 170 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101693.262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101693.262.1 >prot_P-canaliculata_contig101693.262.1 ID=prot_P-canaliculata_contig101693.262.1|Name=mRNA_P-canaliculata_contig101693.262.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=134bp NFGQHWRSGNIVPVTYSVTLPSTLFAELVDTGLPELVYDMKKFPESCDEYback to top mRNA from alignment at P-canaliculata_contig101693:604..1005- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig101693.262.1 ID=mRNA_P-canaliculata_contig101693.262.1|Name=mRNA_P-canaliculata_contig101693.262.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=402bp|location=Sequence derived from alignment at P-canaliculata_contig101693:604..1005- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101693:604..1005- >mRNA_P-canaliculata_contig101693.262.1 ID=mRNA_P-canaliculata_contig101693.262.1|Name=mRNA_P-canaliculata_contig101693.262.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at P-canaliculata_contig101693:604..1005- (Pelvetia canaliculata dioecious)back to top |