prot_P-canaliculata_contig9999.24108.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9999.24108.1
Unique Nameprot_P-canaliculata_contig9999.24108.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length552
Homology
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 8.710e-41
Identity = 113/307 (36.81%), Postives = 159/307 (51.79%), Query Frame = 0
Query:  239 KSETYGECQPDTISFDGTPPCTDCPFGDVTISAGQTECVLGALVYLNLPQSVADAIVEDAVGGFAGPGWAVFDDRAWLRVLLAEDANVLSLAGTFHRWEDVDPTIPASAVIFAYIYTDDDPDNFLSSQGTLDTSTGAFTVVVEDVPTGESSLVLSFAILDSADAPPDMGTNTVYDYNVANVGCGNALTLTLEWDPRTILSEYSSSYYVATYMELLVTEPTGAELPIDE--STIGLHSSGDSY---PIVYTVYGD-NPDA---LGTYKIEVYERGVPLGTE-WTLTAKIRDEEVWVESGVHDSSPSND 535
            + E  G C  ++ S  G PPCT CP G+V+   G T C+   LV L+LP+++A A+  DA+GGFAGPG         ++ L  ED   +SL+GTF R  D    +P+S  +F Y      PD+F+  Q  LD STGAF+ VV D+P G S L+LSF ++D A+A    G +T +  +V+N  C  +LT+TLEW       E S        ++L V EP G  +        +G   + D+Y   P  Y +    +P A   LG Y+  V        TE W LTA++  E VW+E G   SS  +D
Sbjct:  133 QEEVAGLCASNSFSSTGAPPCTTCPDGEVS-GTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLTTTPAGTIQ-LTEEDGGSVSLSGTFVR--DDGAALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEALDTAGADTAFALDVSNSACVPSLTITLEWT-----GEISD-------VDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATETWRLTARVSGEVVWIEEGDFISSTQSD 423          
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 8.590e-39
Identity = 109/295 (36.95%), Postives = 153/295 (51.86%), Query Frame = 0
Query:  251 ISFDGTPPCTDCPFGDVTISAGQTECVLGALVYLNLPQSVADAIVEDAVGGFAGPGWAVFDDRAWLRVLLAEDANVLSLAGTFHRWEDVDPTIPASAVIFAYIYTDDDPDNFLSSQGTLDTSTGAFTVVVEDVPTGESSLVLSFAILDSADAPPDMGTNTVYDYNVANVGCGNALTLTLEWDPRTILSEYSSSYYVATYMELLVTEPTGAELPIDE--STIGLHSSGDSY---PIVYTVYGD-NPDA---LGTYKIEVYERGVPLGTE-WTLTAKIRDEEVWVESGVHDSSPSND 535
             S  G PPCT CP G+V+   G T C+   LV L+LP+++A A+  DA+GGFAGPG         ++ L  ED   +SL+GTF R  D    +P+S  +F Y      PD+F+  Q  LD STGAF+ VV D+P G S L+LSF ++D A+A    G +T +  +V+N  C  +LT+TLEW   T            + ++L V EP G  +        +G   + D+Y   P  Y +    +P A   LG Y+  V        TE W LTA++  E VW+E G   SS  +D
Sbjct:  271 FSSTGAPPCTTCPDGEVS-GTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLTTTPAGTIQ-LTEEDGGSVSLSGTFVR--DDGAALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEALDTAGADTAFALDVSNSACVPSLTITLEWTGET------------SDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATETWRLTARVSGEVVWIEEGDFISSTQSD 549          
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.370e-22
Identity = 94/323 (29.10%), Postives = 150/323 (46.44%), Query Frame = 0
Query:  244 GECQPDTISFDGTPPCTDCPFGDVTISAGQTECVLGALVYLNLP-QSVADAIVEDAVGGFAGPGWAV------------FDDRAWLRVLLAEDANVLSL--AGTFHRWEDVDPTIPASAVIFAYIYTDDDPDNFLSSQGTLDTSTGAFTVVVEDVPTGESSLVLSFAILDSADA----PPDMGTNTVYDYNVANVGCGNALTLTLEWDPRTILSEYSSSYYVATYMELLVTEPTGAELPIDESTIGLHSSGDSYPIVYTVYGDNPDALGTYKIEVYERGVPLGTE--WTLTAKIRDEEVWVESGVHDSSPSNDITELEIVLDD 545
            G C  +T S  GTPPCTDCP G+V+   G   CV   +  + LP +++  A++ DA GGFAGPG  +             D + W  + L  DAN+ S+  +G F R +     +P S+ +F YI   D PD+       +  ++G F++VV DVP G S L LSF I D A+A       +   +++   ++N+ C  +LT+T EW      + Y  +    T +       +G      ++  G   +   Y +   +  D    LG YK   +   +P  T   W +TA++  E V++     +    +DI E  ++L D
Sbjct:  760 GLCTTNTFSSTGTPPCTDCPAGEVS-GRGAKVCVPQGVPAVALPSEAIVAAMLADATGGFAGPGSLIDGGVMGGFGVTEVDIQPWGEIELT-DANLGSVYVSGKFVRHDSA--PLPFSSAVFFYIENADQPDDIARGSSKIRGTSGDFSMVVMDVPPGNSRLFLSFVIKDPAEALNVAAEVVPATSIFSLQISNMACVPSLTITHEWIGGNF-APYEITEPDLTTIHSGHGNYSGGVGVFQDNWAGSSPAAKRYILYSGLDVDTSQVLGEYKGRKFLPILPSETPPTWRITARVSGEIVYMYK---EEQVQSDIVEFTVLLTD 1074          
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: D8LKE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE7_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 8.840e-11
Identity = 73/281 (25.98%), Postives = 120/281 (42.70%), Query Frame = 0
Query:  298 AVGGFAGPGWAV------------FDDRAWLRVLLAEDANVLSL--AGTFHRWEDVDPTIPASAVIFAYIYTDDDPDNFLSSQGTLDTSTGAFTVVVEDVPTGESSLVLSFAILDSADA----PPDMGTNTVYDYNVANVGCGNALTLTLEW-------------DPRTILSEYSSSYYVATYMELLVTEPTGAELPIDESTIGLHSSGDSYPIVYTVYGDNPDALGTYKIEVYERGVPLGTE--WTLTAKIRDEEVWVESGVHDSSPSNDITELEIVLDD 545
            A GGFAGPG  +             D + W  + L  DAN+ S+  +G F R +     +P S+ +F YI   D PD+F      +  ++G  +++V DVP G S L LSF I D A+A       +   +++  +++N+GC  +LT+T EW             D  TI S++               + +G      ++  G   +   Y +   +  D    LG YK  ++   V   T   W  TA++  E V++     +    +D  E  ++L D
Sbjct:   10 ATGGFAGPGSLIDGGVMGGFGVTEVDIQPWGEIELT-DANLGSVYVSGKFVRHDSA--ALPFSSAVFFYIENADQPDDFARGSFKIRGASGDLSMLVTDVPPGNSRLFLSFVIEDPAEALNVAAEVVPATSIFSLDISNMGCVPSLTITHEWIGGNFAPYEITEPDLNTINSDHG--------------DVSGGVGVFQDNWAGSSPAAKRYILYSGLDVDTSQVLGEYKGRMFLPFVTSETPPTWRSTARVSGEIVYMYK---EEQVQSDTVEFTVLLTD 270          
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.900e-10
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    1 MCELTLDLLEPTNIEEVRVALWKGHQRARSFNIVVDGVVMGVFTSSGTTESFETYELTATLASRVVLQAQHTADDNSWFSLLEIQLMTESEVVTSPPVQP 100
            +C ++ DL     ++EVRVAL+ G  R R+ N+ VDG ++  +TSSGTT  FE+  L  T AS  V++ Q   DD+ W S++E ++M   + V +PP  P
Sbjct:  420 VCFISYDLGREFGLDEVRVALYNGDIRVRTINVFVDGALVTTWTSSGTTNGFESIALPDT-ASGTVVELQGVLDDSEWLSIIETEIMVWPQNVVTPPPAP 518          
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 9.860e-9
Identity = 36/100 (36.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    1 MCELTLDLLEPTNIEEVRVALWKGHQRARSFNIVVDGVVMGVFTSSGTTESFETYELTATLASRVVLQAQHTADDNSWFSLLEIQLMTESEVVTSPPVQP 100
            +C ++ DL     ++E+RVAL+ G  R R+ ++ VDGV++  +TSSGTT+ FE+      + S  V+  Q   DD+ W S++E ++M   + V +PP  P
Sbjct:  301 VCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGV-SGTVINLQGVLDDSEWLSIIETEIMVWPQNVVTPPPTP 399          
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 4.290e-6
Identity = 32/99 (32.32%), Postives = 57/99 (57.58%), Query Frame = 0
Query:    2 CELTLDLLEPTNIEEVRVALWKGHQRARSFNIVVDGVVMGVFTSSGTTESFETYELTATLASRVVLQAQHTADDNSWFSLLEIQLMTESEVVTSPPVQP 100
            C ++ DL    +++E+R+A++KG +R  S  + VD  ++  +TSSGTT+ FE  +L+ T     VL+     DD+ W S++E ++M   +  +  P  P
Sbjct:  226 CTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQ--VLEITGVLDDSEWLSIIEAEIMVLEDGASPMPTTP 322          
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.790e-5
Identity = 30/86 (34.88%), Postives = 54/86 (62.79%), Query Frame = 0
Query:    2 CELTLDLLEPTNIEEVRVALWKGHQRARSFNIVVDGVVMGVFTSSGTTESFETYELTATLASRVVLQAQHTADDNSWFSLLEIQLM 87
            C ++ DL    +++EVR+A++KG +R  +  + VD  ++  +TSSGTT+ FE  +++ T  S  VL+     DD+ W S++E ++M
Sbjct:  413 CSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRVDDALVITWTSSGTTDGFEAIDMSGT--SGQVLEITGVLDDSEWLSIIEAEIM 496          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9999.24108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G5D6_ECTSI8.710e-4136.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3X5_ECTSI8.590e-3936.95VWFD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JLL4_9PHAE2.370e-2229.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKE7_ECTSI8.840e-1125.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFA6_9PHAE2.900e-1040.00F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FZZ4_ECTSI9.860e-936.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KH45_9PHAE4.290e-632.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTH1_ECTSI1.790e-534.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9999contigP-canaliculata_contig9999:3135..7190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9999.24108.1mRNA_P-canaliculata_contig9999.24108.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9999 1912..7384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9999.24108.1 ID=prot_P-canaliculata_contig9999.24108.1|Name=mRNA_P-canaliculata_contig9999.24108.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=552bp
MCELTLDLLEPTNIEEVRVALWKGHQRARSFNIVVDGVVMGVFTSSGTTE
SFETYELTATLASRVVLQAQHTADDNSWFSLLEIQLMTESEVVTSPPVQP
TDSGCSTGSIRSSLEVQLSYAGAGRYLDLNAEEPSGAVVDQYDKGDVGVL
TSVGFYDDPGMKYTTYTLMNGLDATEDPVLGDYTFWVKGGEEGEEYLLTA
RASGELMWAVEGMVGSDPWDDDQPTYTATITEYEESDCKSETYGECQPDT
ISFDGTPPCTDCPFGDVTISAGQTECVLGALVYLNLPQSVADAIVEDAVG
GFAGPGWAVFDDRAWLRVLLAEDANVLSLAGTFHRWEDVDPTIPASAVIF
AYIYTDDDPDNFLSSQGTLDTSTGAFTVVVEDVPTGESSLVLSFAILDSA
DAPPDMGTNTVYDYNVANVGCGNALTLTLEWDPRTILSEYSSSYYVATYM
ELLVTEPTGAELPIDESTIGLHSSGDSYPIVYTVYGDNPDALGTYKIEVY
ERGVPLGTEWTLTAKIRDEEVWVESGVHDSSPSNDITELEIVLDDISRYE
C*
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