prot_P-canaliculata_contig99818.24098.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99818.24098.1
Unique Nameprot_P-canaliculata_contig99818.24098.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length103
Homology
BLAST of mRNA_P-canaliculata_contig99818.24098.1 vs. uniprot
Match: A0A423S3E3_9BURK (Uncharacterized protein n=1 Tax=Pusillimonas sp. NJUB218 TaxID=2023230 RepID=A0A423S3E3_9BURK)

HSP 1 Score: 52.8 bits (125), Expect = 2.460e-6
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 MALTVEDGSGTDTSVNSYVSVTEFTEFLTNRNLSVTAGSE---EALILRATDIIEQQN-YKGNKTTTTQALSFPR 71
            MAL VEDG+G++ S  SY+SV + T +    NL  T GSE   EA + RAT  ++ +  YKG + T +QAL++PR
Sbjct:    1 MALIVEDGTGSNPSAESYISVADCTTYAAAHNLVFT-GSESEQEARLRRATQYLDAEYAYKGEQLTASQALAWPR 74          
BLAST of mRNA_P-canaliculata_contig99818.24098.1 vs. uniprot
Match: A0A5H2QAA3_9CAUD (Structural protein n=1 Tax=Achromobacter phage vB_Ade_ART TaxID=2292880 RepID=A0A5H2QAA3_9CAUD)

HSP 1 Score: 50.8 bits (120), Expect = 1.720e-5
Identity = 35/99 (35.35%), Postives = 60/99 (60.61%), Query Frame = 0
Query:    1 MALTVEDGSGTDTSVNSYVSVTEFTEFLTNRNLSVTAGSE--EALILRATDIIEQ--QNYKGNKTTTTQALSFPRSNIY-DKENISYDENSIPKSIKIS 94
            MAL VEDG+G +T+ NSY+ V     +  +R L ++      E  I+ A D +E   + +KG + T+TQALS+PR+++  D E  ++ ++ IP  +K++
Sbjct:    1 MALIVEDGTGKETA-NSYIDVQFARAYAQSRGLPISDDDAVVEGWIVMACDYVESFAEQFKGKRKTSTQALSWPRTDVVIDGE--AFPDDKIPTQLKLA 96          
BLAST of mRNA_P-canaliculata_contig99818.24098.1 vs. uniprot
Match: UPI000E20F2BA (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000E20F2BA)

HSP 1 Score: 49.7 bits (117), Expect = 4.450e-5
Identity = 29/93 (31.18%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 MALTVEDGSGTDTSVNSYVSVTEFTEF--LTNRNLSVTAGSEEALILRATDIIEQQ---NYKGNKTTTTQALSFPRSNIYDKENISYDENSIP 88
            MAL +E GS    + N+++S+ +F  +  L    +  T     A ++R+ + +E +    + G+K +  QALS+PR N+YD+++ SYD + +P
Sbjct:    1 MALIIETGSVVP-NANTFISLDDFKAYCILVGYLIETTDDEVSAALVRSANYLENRYRTRWVGSKASRDQALSWPRKNVYDEDDYSYDSDVVP 92          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99818.24098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A423S3E3_9BURK2.460e-645.33Uncharacterized protein n=1 Tax=Pusillimonas sp. N... [more]
A0A5H2QAA3_9CAUD1.720e-535.35Structural protein n=1 Tax=Achromobacter phage vB_... [more]
UPI000E20F2BA4.450e-531.18hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99818contigP-canaliculata_contig99818:79..387 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99818.24098.1mRNA_P-canaliculata_contig99818.24098.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99818 79..387 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99818.24098.1 ID=prot_P-canaliculata_contig99818.24098.1|Name=mRNA_P-canaliculata_contig99818.24098.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=103bp
MALTVEDGSGTDTSVNSYVSVTEFTEFLTNRNLSVTAGSEEALILRATDI
IEQQNYKGNKTTTTQALSFPRSNIYDKENISYDENSIPKSIKISVIYLAW
YIN
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