prot_P-canaliculata_contig9979.24096.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9979.24096.1
Unique Nameprot_P-canaliculata_contig9979.24096.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length391
Homology
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 3.970e-113
Identity = 217/419 (51.79%), Postives = 251/419 (59.90%), Query Frame = 0
Query:    1 MTDTIKADLERLYPTGCGEHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGY----RHAPPSMYLGGLSDTAEDDHLRAGSSESGPAWLMDGGKTGGESGNGFSRRIPRSNSNHSREQQQRLRAEEEYGRGLGGA-------------GFGREGGIEARGGDMRNNWQQGLDEFTRRALSAAQDVAKRAVQTVERTQHGG--------GSAPGA----LARRLREVCAAMEAGKTSVHAAAEDIREVARLLEGRKEFNSGRRSSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVTRGFSTYSEDDGCADGLYTRDL 390
            MTDTIKADLERL+PTGCG+HFLAPARQ+LLLSVLS+WADL+T+T YRQ    LYGMKWARLMFGREFRVEGVL LWDHIFASS +EG+PD+PECIE VAVAMV+S+R +LLAED TGCLQLLMRYPPDQ VST I LS++L +        R   PS +    S  A          E  P WL  GG+  G      S R P +  +          A  E+ R  GG               FGR+  +E    + +NNWQQGLDEFTRRA+SAAQ VAK AVQTVERTQ GG        G  P +    L+RRLR  CA ME G+  V  AA++I+EVAR+LE R    S R    S                                 +GVTR FSTYSEDDGCAD LYT+DL
Sbjct:   93 MTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTETAYRQ----LYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSLAKGQSLAAFERSTEPSSFAAASSGRAAPSSSSEIQQEPAPVWLNRGGRDHGS----VSGRSPSATGSAGH-------APSEWRRDDGGGXXVXXXXXXGRARAFGRDERLETER-EAKNNWQQGLDEFTRRAMSAAQGVAKLAVQTVERTQGGGDPRHLRTAGGVPASEALSLSRRLRTACAKMETGEAPVSLAAQEIKEVARILEARSGAPSVREPLRSTNSMGGGGGG-----------------------QGVTRAFSTYSEDDGCADALYTQDL 472          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 7.180e-88
Identity = 222/594 (37.37%), Postives = 256/594 (43.10%), Query Frame = 0
Query:    1 MTDTIKADLERLYPTGCGEHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGY----RHAPPSMYLGGLSDTAEDDHLRAGSSESGPAWLMDGGKTGGESGNGF-SRRIPRSNSNHSREQQQRLRAEEEYGRGLGGA-------------GFGREGGIEARGGDMRNNWQQGLDEFTRRALSAAQDVAKRAVQTVERTQHGG--------GSAPGA----LARRLREVCAAMEAGKTSVHAAAEDIREVARLLEGRKEFNSGRRSSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVTRGFSTYSEDDGCADGLYTRDL 390
            MTDTIKADLERL+PTGCG+HFLAPARQ+LLLSVLS+WADL+T T YRQGMHE                                                                                                                                                                              LYGMKWARLMFGREFRVEGVL LWDHIFASS +EG+PD+PECIE VAVAMV+S+R +LLAED TGCLQLLMRYPPDQ VST I LS++L +        R   PS +    S  A          E  P WL  GG+     G+G  S R P +             A  E+ R  GG               FGR+  +E    + +NNWQQGLDEFTRRA+SAAQ VAK AVQTVERTQ GG        G  P +    L+RRLR  CA +E G+T V  AA++I+EVAR+LE R    S R    S                                 +GVTR FSTYSEDDGCAD LYT+DL
Sbjct:  133 MTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKEVAAATRAEAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTSALGAGRGGGEGGSVDSPVVEMCKRLQGVRMRAADPELQQHLSHLDISPQAGYLKLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQDVSTAISLSLSLAKGQSLAAFERSTEPSSFSAASSGRAAPSSSSEIQQEPAPVWLNRGGR-----GHGIISGRSPSATGRAGH-------APSEWRRDDGGGXXVXXXXXXGRARAFGRDERLETER-EAKNNWQQGLDEFTRRAMSAAQGVAKLAVQTVERTQGGGDPRHLRTAGGVPASEALSLSRRLRTACAKLETGETPVSLAAQEIKEVARILEARSGAPSVREPLRSTNSMGSGGGG-----------------------QGVTRAFSTYSEDDGCADALYTQDL 690          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A444TDY5_ARMVU (TBC1 domain family member 5 n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TDY5_ARMVU)

HSP 1 Score: 87.0 bits (214), Expect = 7.340e-15
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   52 ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGG------YRHAPPSMY-LGGLSDTAEDDHLRAGS 172
            ++YG++W RLMFGREF    +L +WD IFA S           IE + VAM+  ++D+LL  D T CL LLMRYPP   V ++I  ++   +P G      Y++ P S+  +GG  +       R GS
Sbjct:  406 QVYGIRWVRLMFGREFSFTDLLMVWDAIFADSYSNFL-----LIEYLMVAMLSYIKDQLLEADYTSCLSLLMRYPPSSDVQSIIQTALYFRKPDGSNIPRKYKNVPASLATVGGQQNIHRSPQTRHGS 528          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A5N5TGS9_9CRUS (TBC1 domain family member 5 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5TGS9_9CRUS)

HSP 1 Score: 87.0 bits (214), Expect = 8.360e-15
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   52 ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGG------YRHAPPSMY-LGGLSDTAEDDHLRAGS 172
            ++YG++W RLMFGREF    +L +WD IFA S           IE + VAM+  ++D+LL  D T CL LLMRYPP   V ++I  ++   +P G      Y++ P S+  +GG  +       R GS
Sbjct:  358 QVYGIRWVRLMFGREFSFTDLLMVWDAIFADSYSNFL-----LIEYLMVAMLSYIKDQLLEADYTSCLSLLMRYPPSSDVQSIIQTALYFRKPDGSNIPRKYKNVPASLATVGGQQNIHRSPQTRHGS 480          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A2Z6QHF3_9GLOM (Rab-GAP TBC domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QHF3_9GLOM)

HSP 1 Score: 87.0 bits (214), Expect = 9.360e-15
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   39 DLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIAL 141
            +LH      +   +LYG++W RL+FGREF ++ VL LWD IFA       P L   ++ V VAM+L +RD+LL  D TGCL +LMRYPP      +I  +I L
Sbjct:  279 ELHERLNELEIEPQLYGIRWIRLLFGREFPLDKVLTLWDGIFAED-----PTL-RIVDHVCVAMMLLIRDDLLKSDYTGCLSMLMRYPPTSDTGVLIKQAIYL 375          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A812ASD9_SEPPH (TBC1D5 n=6 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812ASD9_SEPPH)

HSP 1 Score: 86.7 bits (213), Expect = 1.400e-14
Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 0
Query:   38 ADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGYRHAPPSMY 155
            A+LH      + + ++YG++W RL+FGREF ++ +L LWD IFA  +  G     + ++ V V M+L +RD LL  D   C+  LMRYPP   V   +D ++ L +P  Y   PP  Y
Sbjct:  783 AELHLHLERLEIVPQIYGIRWVRLLFGREFPMQDLLMLWDAIFADGI--GF----DLVDYVFVGMLLYIRDLLLTSDYPNCMNTLMRYPPVGDVHYFVDKALYLREPNQYPRPPPYSY 894          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A1B6M3J3_9HEMI (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6M3J3_9HEMI)

HSP 1 Score: 80.1 bits (196), Expect = 2.040e-14
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 0
Query:   19 EHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGY 147
            EH LAP           L  +LH           L+G++W RL+FGREF ++ +L +WD IFA    EG   + + +  V +AM++++R +LL  D TGCL +LM+YP    VS +ID ++ L  P  Y
Sbjct:    1 EHLLAP-----------LDPELHQHLQQMNVTLPLFGIRWLRLLFGREFPLQDLLVMWDAIFA----EG--SMFQLVNYVVIAMLMAIRRQLLISDHTGCLTILMKYPA-MDVSKIIDRALFLKNPQTY 111          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A8D9DY72_9HEMI (TBC1 domain family member 5 n=4 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9DY72_9HEMI)

HSP 1 Score: 85.5 bits (210), Expect = 2.580e-14
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 0
Query:   19 EHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGYRHAPPS 153
            EH L PA   L   + +L   L            L+G++W RL+FGREF ++ +L LWD IFA S         E +  V VAM++++RD++++ D   CL  LMRYPP   V+++I+ ++ L  P  Y    PS
Sbjct:  313 EHILKPADPALHAQLYNLKIPL-----------TLFGIRWLRLLFGREFSLQDLLVLWDVIFAESF--------ELVNYVVVAMLVAIRDQVISSDHIECLSYLMRYPPGIDVNSIIEHALHLKYPNLYPEYEPS 428          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A4V5ZYV7_STECR (Rab-GAP TBC domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4V5ZYV7_STECR)

HSP 1 Score: 81.6 bits (200), Expect = 5.910e-14
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   52 ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGYRHAPPSM 154
            ++YG++W RL+FGREF +  +L LWD IFA      +P L   ++ + +AM+L +RD LLA D + CLQ LMRYPP   V + I L++ L  P  +   P  +
Sbjct:  106 QIYGIRWLRLLFGREFPMPDLLCLWDAIFAD-----KPTLV-LVDFIFIAMLLQIRDLLLAGDYSMCLQYLMRYPPTVDVHSFIQLALYLKSPKKFARPPAGV 202          
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A8H6A922_ASPBU (Rab-GAP TBC domain-containing protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A8H6A922_ASPBU)

HSP 1 Score: 84.0 bits (206), Expect = 7.660e-14
Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 0
Query:    3 DTIKADLERLYPTGCGEHFL--APARQQLLLSVLSLWADLHTDTGYRQGMH------------ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYP---PDQSVSTVID 136
            + ++AD+ +       E+F    PA +  +  VL ++A L+ D GYRQ +             +++  +W RL+FGREF  E VL LWD +F+  L       PE ++ V VAM+L +R +LLA DS+  L +L+RYP   P +  S V+D
Sbjct:  110 EQMRADISQDVDRCLQENFFFREPATKAKMTDVLFIYAKLNPDLGYRQDLELADHLQAQEILPQIFLTRWMRLLFGREFPFEDVLILWDFLFSEGLR------PELVDYVCVAMLLRIRWQLLAADSSTVLTMLLRYPSPHPHEPYSFVLD 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI0_ECTSI3.970e-11351.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGW7_9PHAE7.180e-8837.37Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A444TDY5_ARMVU7.340e-1538.28TBC1 domain family member 5 n=1 Tax=Armadillidium ... [more]
A0A5N5TGS9_9CRUS8.360e-1538.28TBC1 domain family member 5 n=1 Tax=Armadillidium ... [more]
A0A2Z6QHF3_9GLOM9.360e-1544.66Rab-GAP TBC domain-containing protein n=2 Tax=Rhiz... [more]
A0A812ASD9_SEPPH1.400e-1438.14TBC1D5 n=6 Tax=Sepia pharaonis TaxID=158019 RepID=... [more]
A0A1B6M3J3_9HEMI2.040e-1437.21Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A8D9DY72_9HEMI2.580e-1436.30TBC1 domain family member 5 n=4 Tax=Cacopsylla mel... [more]
A0A4V5ZYV7_STECR5.910e-1441.75Rab-GAP TBC domain-containing protein n=1 Tax=Stei... [more]
A0A8H6A922_ASPBU7.660e-1435.10Rab-GAP TBC domain-containing protein n=3 Tax=Aspe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 28..143
e-value: 5.7E-18
score: 67.0
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 4..53
NoneNo IPR availablePANTHERPTHR22957:SF521coord: 56..136
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 56..136
NoneNo IPR availablePANTHERPTHR22957:SF521coord: 4..53
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 3..54
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 52..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9979contigP-canaliculata_contig9979:7532..10755 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9979.24096.1mRNA_P-canaliculata_contig9979.24096.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9979 6387..10767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9979.24096.1 ID=prot_P-canaliculata_contig9979.24096.1|Name=mRNA_P-canaliculata_contig9979.24096.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=391bp
MTDTIKADLERLYPTGCGEHFLAPARQQLLLSVLSLWADLHTDTGYRQGM
HELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAV
AMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGYRHA
PPSMYLGGLSDTAEDDHLRAGSSESGPAWLMDGGKTGGESGNGFSRRIPR
SNSNHSREQQQRLRAEEEYGRGLGGAGFGREGGIEARGGDMRNNWQQGLD
EFTRRALSAAQDVAKRAVQTVERTQHGGGSAPGALARRLREVCAAMEAGK
TSVHAAAEDIREVARLLEGRKEFNSGRRSSASASASGRGNGSSSGNSSSG
NSSNRSLMGGGGGGGRGVTRGFSTYSEDDGCADGLYTRDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf