prot_P-canaliculata_contig994.24053.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig994.24053.1
Unique Nameprot_P-canaliculata_contig994.24053.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length733
Homology
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: D7FR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR26_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 1.260e-75
Identity = 223/566 (39.40%), Postives = 266/566 (47.00%), Query Frame = 0
Query:  153 VSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLPGEADEDDGEGSHAKMYTSPLSGKWSANMPRAEKSKR---DGYSGDXXXXXXXXXXXXXXXGLFGGWNVGGF---FESAWS-EVTPVSTLLALTLLWGGAKARSFAQRRH---FEAKLRGIEVERPIVRFNA--GGWSVKQEALGSAGTCPICLDTFAVPSSEVQTPCNTVGACTVGEGLIDADGVVVATLP-CGHSFCRSCLERWHKIGSGAKGPCQSTTSHVNSPCPICHEATPALGDPRLACTRRTSRRSLRPRGEAGSVKFSWEGDSSVARGRPSSDLGSSGRMGLRFMWTGSNRGGREVTGRNVSPPXXXXXXXKSRSIGGSPDGVPLTPVKVAPRGMRTDKGGRVRERMAPTMIPGYLRQTDESSSRQRVNREVAFRLASLGSQYPAFVDDRIVNRWLSNDKSSSWSRDPLLVRNHRQGIFGRMRIPKAHFSXXXXXXXXXXXXXXXXNGGMGGHPGSWEKGSGWVSNRSRG 705
            V+A+ FARGV DSWR+GK GCDNGF+LVAS+ DR+FAISVGKGLE++L  +DRNAALNAMKPLLREGDWD A++ ALEEI+GRL  +L   A    G         S L   W       E  KR   DG+ G XXXXXXXXXXXXXX   F G+++GGF   F  +W+ +V P S LLAL+LLWGGA AR+  QRR    FEAKL GIE +R ++  +A  GGW V Q+AL S G CPICLD F    SE     +  GA T  +GL+ ADG+  ATLP CGH+FC+                                                                            RPS                          G + +P                  GV  T                           G L +T    +R+R  RE AF+LASLGSQYP F+DDR VNRWLS D SSSWSRDP+L  N  Q                              NG +GG  G   KGSGWV+N SRG
Sbjct:   34 VTAEGFARGVQDSWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVVLALEEIHGRLVGNLAKAAG---GXXXXXXXXLSSLGWGW-------EDLKRWASDGWGGSXXXXXXXXXXXXXX--XFRGFHLGGFENFFRESWNVDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAAGGGWLVGQDALASRGVCPICLDAF----SEAA---DGSGADT--KGLVGADGMPAATLPDCGHTFCQ----------------------------------------------------------------------------RPS--------------------------GASANP------------------GVSRT---------------------------GRLGETGGEQARERARREAAFQLASLGSQYPKFLDDRTVNRWLSKDYSSSWSRDPMLALNRPQDT-------------------------GSDNGRVGG--GGARKGSGWVTNGSRG 404          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5JG24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG24_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.470e-63
Identity = 170/330 (51.52%), Postives = 203/330 (61.52%), Query Frame = 0
Query:  109 PQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEGGG--VSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLPGEADEDDGEGSHAKMYTSPLSGKWSANMPRAEKSKRDGYSGDXXXXXXXXXXXXXXXGLFGGWNVGGF---FESAWS-EVTPVSTLLALTLLWGGAKARSFAQRRH---FEAKLRGIEVERPIVRFNAGG-WSVKQEALGSAGTCPICLDTFAVPSSEVQTPCNTVGACTVGEGLIDADGVVVATLP-CGHSFCR 427
            P+G  GG  V   +L  GG        GV+           GGG  V+A+ FARGV D WR+GK GCDNGF+LVAS+ DR+FAISVGKGLE++L  +DRNAALNAMKPLLREGDWD A+L  LEEI+ RL  +L   A   DG G+ A    S L   W     RA           XXXXXXXXXXXXXX   F G+++GGF   F   W  +V P S LLAL+LLWGGA AR+  QRR    FEAKL GIE +R ++  +AGG WSV Q+AL S G CPICLD F    SE     +  GA T  +GL+ AD +  ATLP CGH+FC+
Sbjct:    6 PRGGAGGGGVGINVLNKGG--------GVV-----------GGGEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLGLEEIHRRLFENLAKAAGGGDG-GAGA---LSSLGWGWEDLKRRASGGWXXXXXXXXXXXXXXXXXXXXX--XFRGFHLGGFENSFGENWKLDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAGGGWSVGQDALASRGVCPICLDAF----SEAA---DGSGADT--KGLVGADRMPAATLPDCGHTFCQ 301          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A835YUD5_9STRA (TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.580e-19
Identity = 130/427 (30.44%), Postives = 187/427 (43.79%), Query Frame = 0
Query:   46 WSVEFLPSPTRDPKGCGRPGKFVEGSFVCDPDGLLTLSGAERIEEKLEDMS-GLRSPCGDGGDVPQGVEGGVAVVSRI-LASGGDGVNKKPRGVLSMLERTRSELEGGGVSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLPGEADEDDGEGSHAKMYTSPLSGKWSANMP-RAEKSKRDGYSGDXXXXXXXXXXXXXXXGLFGGWNVGGF--------FESAWSEVTPVSTLLALTLL--WGGAKARSFAQRRHFEAKLRGIEVERPIVRFNAGGWSVKQEALGSAGTCPICLDTFAVPSSEVQTPCNTVGACTVGEGL-IDADGVVVATLPCGHSFCRSCLERWHKIGSGAKGPCQSTTSHVNSPCPIC 458
            W+ +  P   R P  C         + +CDPD  L+   A+RIE +LE ++   +S CG  G   Q ++  VA+   I + +G D               T +E          FA+ + D+W +G   C NG LL+ S   R+FA+S+G GLE  L    R+A L+AM P LR GD  AA+L AL  ++G L      +         H K     L    SA+      ++   G    XXXXXXXXXXXXXXX      +  G         F    S+    + L AL L   W  A+A  F ++         +E  + + + +AG       A  +  +CP+CL+ F    + V     + GA   GE L +   G+ +  L CGH +CRSCL        G      ++T   +SPCPIC
Sbjct:   34 WATDDYPDLQRTPVLCRAADAPNNAALLCDPDATLSPPNADRIEAELERLATAYQSACGPEGSY-QPLQLAVAIADAIHIPAGAD------------THATTAE----------FAKRLQDAWGVGHADCHNGALLLVSLRTRSFALSIGTGLEVTLPKAKRDAVLDAMVPWLRRGDTAAAVLAALRLLDGLLLAESQKQ--------QHRKRGPPMLRAVPSADGHLNVNEAGGGGXXXXXXXXXXXXXXXXXXXXXXXXXHRSGTTAASDALRFLRRHSQFALPAGLSALFLFDSWRRAQAADFRRK---------VEELQALQQRSAGAADGAPSA-EARSSCPVCLEPF---KATVTDGGGSGGAG--GEELPLGKAGLPLVELQCGHRYCRSCL-------GGMLRSAGASTCGPSSPCPIC 407          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: L1I404_GUITC (TPM_phosphatase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I404_GUITC)

HSP 1 Score: 92.0 bits (227), Expect = 5.810e-16
Identity = 62/209 (29.67%), Postives = 98/209 (46.89%), Query Frame = 0
Query:   30 VLSHRGDDGGETVQNGWSVEFLPSPT--RDPKGCGRPGKFVEGSFVCDPDGLLTLSGAERIEEKLEDMSGLRSPCGDGGDVPQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEGGGVSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRL 236
            VL  RG+   +    GW    LP+P+       CGR       S VCDPDGL++   A++++E ++          D   +   ++  VA+V++                +   ++ R EL      A  +AR VHD+W +G  G  NG LL  S+ DR   IS G+     L     N  ++ M+P+LR+G +D A+LK ++EI  R+
Sbjct:   52 VLETRGEKKHKYTVKGWPSSALPNPSTKEGASACGRS-TVKHSSSVCDPDGLISRKSADQMDEMIDAARKQVGLKDDETSLVHDLQIAVAIVNK----------------MGPADKDRREL------ATRYARQVHDNWGLGSAGIGNGVLLFVSKEDRQVYISTGRLARNKLPDSVCNQIVDVMRPVLRQGYFDQALLKGVQEIITRI 237          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A7S0F4B4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F4B4_9CRYP)

HSP 1 Score: 91.3 bits (225), Expect = 1.180e-15
Identity = 65/199 (32.66%), Postives = 92/199 (46.23%), Query Frame = 0
Query:   40 ETVQNGWSVEFLPSPT--RDPKGCGRPGKFVEGSFVCDPDGLLTLSGAERIEEKLEDMSGLRSPCGDGGDVPQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEGGGVSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRL 236
            E    GW    LP+P+       CGR       S VCDPDGL++   A++I+E ++      S   D       ++  VA+V+R+      G   K R  L                A  +AR VHDSW +G  G  NG LL  S+ DR   IS G+     L     N  ++ M+P+LR+G +D A+LK L+EI  R+
Sbjct:   72 EFSSKGWPSHALPNPSTKEGANACGRS-SVQHSSSVCDPDGLISRKSADQIDEMIDAARKQISFTDDQSSQVHDLQIAVAIVNRM------GDEDKDRRAL----------------ASRYARQVHDSWGLGDAGVGNGVLLFVSKEDRQVYISTGRLARSRLPDSVCNQIVDIMRPVLRKGYFDQALLKGLQEIITRV 247          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6U1R1L4_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1R1L4_CYCTE)

HSP 1 Score: 65.9 bits (159), Expect = 1.080e-7
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
Query:  154 SADWFARGVHDSWRIG-KHGCDN-GFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLP 241
            +A+ FA  +HD+W +G    C   G LL  S +DR   +S G+ LE+ LT K  +  ++ MKPLLREG + AAI+KALE+I   L    P
Sbjct:   56 AAESFAVYLHDTWGVGVATDCGGTGALLFLSVSDRALYVSRGEALERILTEKRLDRVISNMKPLLREGRFGAAIVKALEDIQQYLETGEP 145          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A835WHA7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WHA7_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 8.160e-6
Identity = 48/185 (25.95%), Postives = 74/185 (40.00%), Query Frame = 0
Query:   57 DPKGCGRPGKFVEGSFVCDPDGLLTLSGAERIEEKLEDMSG-----LRSPCGDGGDVPQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEGGGVSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRL 236
            DP  CGR    V G+++CDPD LLT   A  ++  L  +        ++PCG     P  ++G    ++                   ++ R   +      +A  FA  + D+W +G   CDNG LL+ SQ    FA+  G G+   L        +      LREG     +  A++ I   L
Sbjct:    5 DPGACGRN---VTGTWLCDPDDLLTAEAAAGLDGLLRRVRDGAKPFAQAPCG-----PSAIDGFPVAIA-------------------LMHRMYEDPNPPAAAAS-FAAALMDAWAVGNPACDNGLLLLWSQLQGVFALEAGAGVRALLPEGVLAEVVGNASAELREGRVYDGLKNAVKRIGLEL 161          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: G5G9Z0_9BACT (TPM_phosphatase domain-containing protein n=3 Tax=Alloprevotella rava TaxID=671218 RepID=G5G9Z0_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 2.380e-5
Identity = 52/210 (24.76%), Postives = 88/210 (41.90%), Query Frame = 0
Query:   46 WSVEFLPSPTRDPKGCGRPGKFVEGSF--VCDPDGLLTLSGAERIEEKLEDMSGLRSPCGDGGDVPQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEGGGVSADWFARGVH--DSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNA-MKPLLREGDWDAAILKALEEINGRLR--RSLPGEADEDD 248
            W+ E LP P            +++ +F  VC+PDG+L+ +  + I +KL D+   R           GV+  V  V R+                                AD +  G+     + IG    + G +++ +  DR + I  G+GLE  L     +   N  MKP L++GDWD A+LK+++ +   +    SL  E +E++
Sbjct:   42 WTPENLPMP------------YLQNAFHHVCNPDGVLSPTIEDSINQKLVDLEQTR-----------GVQAIVVAVERV------------------------------EDADTYQFGMDLARKYGIGSKKQNTGLIIILATKDRKYYILTGEGLEGTLPDAICSRVENRIMKPFLKQGDWDNAMLKSVDALVRYMNGDESLEAEKEEEE 198          
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: UPI001E29EBF3 (TPM domain-containing protein n=1 Tax=Croceicoccus sp. Ery15 TaxID=1703338 RepID=UPI001E29EBF3)

HSP 1 Score: 54.7 bits (130), Expect = 5.990e-5
Identity = 30/88 (34.09%), Postives = 44/88 (50.00%), Query Frame = 0
Query:  152 GVSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRS 239
            G S D F    H  W  G  G ++  ++  S ADR   +S G GL    T   R A ++AMKPL R GD+  A+L  ++ +   L ++
Sbjct:   78 GESFDRFTNRFHAGWERGT-GSNDAAIVFVSPADRLVGVSTGHGLPVRPTEAQRQAIIDAMKPLARAGDFKGAVLTGIKGVEDLLAKA 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FR26_ECTSI1.260e-7539.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG24_9PHAE2.470e-6351.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUD5_9STRA3.580e-1930.44TLP18.3, Psb32 and MOLO-1 founding proteins of pho... [more]
L1I404_GUITC5.810e-1629.67TPM_phosphatase domain-containing protein n=1 Tax=... [more]
A0A7S0F4B4_9CRYP1.180e-1532.66Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A6U1R1L4_CYCTE1.080e-743.33Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A835WHA7_9CHLO8.160e-625.95Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
G5G9Z0_9BACT2.380e-524.76TPM_phosphatase domain-containing protein n=3 Tax=... [more]
UPI001E29EBF35.990e-534.09TPM domain-containing protein n=1 Tax=Croceicoccus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 378..458
e-value: 6.5E-7
score: 39.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 378..459
score: 11.191
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 365..465
e-value: 4.1E-11
score: 44.1
IPR007621TPM domainPFAMPF04536TPM_phosphatasecoord: 156..233
e-value: 1.3E-13
score: 51.2
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 378..458
e-value: 1.5E-7
score: 31.1
NoneNo IPR availableGENE3D3.10.310.50coord: 136..243
e-value: 2.0E-16
score: 61.6
NoneNo IPR availablePANTHERPTHR33748FAMILY NOT NAMEDcoord: 42..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..732
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.755
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 371..462
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 421..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig994contigP-canaliculata_contig994:4534..13195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig994.24053.1mRNA_P-canaliculata_contig994.24053.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig994 4492..15877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig994.24053.1 ID=prot_P-canaliculata_contig994.24053.1|Name=mRNA_P-canaliculata_contig994.24053.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=733bp
MRPQQHLCMRSYLHRVRIVLLLVYAVLHRVLSHRGDDGGETVQNGWSVEF
LPSPTRDPKGCGRPGKFVEGSFVCDPDGLLTLSGAERIEEKLEDMSGLRS
PCGDGGDVPQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEG
GGVSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFL
TSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLPGEADEDDGE
GSHAKMYTSPLSGKWSANMPRAEKSKRDGYSGDGDGDGGGGGGGGGGGGL
FGGWNVGGFFESAWSEVTPVSTLLALTLLWGGAKARSFAQRRHFEAKLRG
IEVERPIVRFNAGGWSVKQEALGSAGTCPICLDTFAVPSSEVQTPCNTVG
ACTVGEGLIDADGVVVATLPCGHSFCRSCLERWHKIGSGAKGPCQSTTSH
VNSPCPICHEATPALGDPRLACTRRTSRRSLRPRGEAGSVKFSWEGDSSV
ARGRPSSDLGSSGRMGLRFMWTGSNRGGREVTGRNVSPPPPPPPPPKSRS
IGGSPDGVPLTPVKVAPRGMRTDKGGRVRERMAPTMIPGYLRQTDESSSR
QRVNREVAFRLASLGSQYPAFVDDRIVNRWLSNDKSSSWSRDPLLVRNHR
QGIFGRMRIPKAHFSSWSGDPFLPTNYRSDINGGMGGHPGSWEKGSGWVS
NRSRGDCNGGAFSEEHKHYSGGSSASATSGEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR007621TPM_dom
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS