mRNA_P-canaliculata_contig994.24053.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-canaliculata_contig994.24053.1
Unique Name	mRNA_P-canaliculata_contig994.24053.1
Type	mRNA
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))

Homology

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: D7FR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR26_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 1.400e-72
Identity = 223/566 (39.40%), Postives = 266/566 (47.00%), Query Frame = 1

Query:  499 VSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLPGEADEDDGEGSHAKMYTSPLSGKWSANMPRAEKSKR---DGYSGDXXXXXXXXXXXXXXXGLFGGWNVGGF---FESAWS-EVTPVSTLLALTLLWGGAKARSFAQRRH---FEAKLRGIEVERPIVRFNA--GGWSVKQEALGSAGTCPICLDTFAVPSSEVQTPCNTVGACTVGEGLIDADGVVVATLP-CGHSFCRSCLERWHKIGSGAKGPCQSTTSHVNSPCPICHEATPALGDPRLACTRRTSRRSLRPRGEAGSVKFSWEGDSSVARGRPSSDLGSSGRMGLRFMWTGSNRGGREVTGRNVSPPXXXXXXXKSRSIGGSPDGVPLTPVKVAPRGMRTDKGGRVRERMAPTMIPGYLRQTDESSSRQRVNREVAFRLASLGSQYPAFVDDRIVNRWLSNDKSSSWSRDPLLVRNHRQGIFGRMRIPKAHFSXXXXXXXXXXXXXXXXNGGMGGHPGSWEKGSGWVSNRSRG 2157
            V+A+ FARGV DSWR+GK GCDNGF+LVAS+ DR+FAISVGKGLE++L  +DRNAALNAMKPLLREGDWD A++ ALEEI+GRL  +L   A    G         S L   W       E  KR   DG+ G XXXXXXXXXXXXXX   F G+++GGF   F  +W+ +V P S LLAL+LLWGGA AR+  QRR    FEAKL GIE +R ++  +A  GGW V Q+AL S G CPICLD F    SE     +  GA T  +GL+ ADG+  ATLP CGH+FC+                                                                            RPS                          G + +P                  GV  T                           G L +T    +R+R  RE AF+LASLGSQYP F+DDR VNRWLS D SSSWSRDP+L  N  Q                              NG +GG  G   KGSGWV+N SRG
Sbjct:   34 VTAEGFARGVQDSWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVVLALEEIHGRLVGNLAKAAG---GXXXXXXXXLSSLGWGW-------EDLKRWASDGWGGSXXXXXXXXXXXXXX--XFRGFHLGGFENFFRESWNVDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAAGGGWLVGQDALASRGVCPICLDAF----SEAA---DGSGADT--KGLVGADGMPAATLPDCGHTFCQ----------------------------------------------------------------------------RPS--------------------------GASANP------------------GVSRT---------------------------GRLGETGGEQARERARREAAFQLASLGSQYPKFLDDRTVNRWLSKDYSSSWSRDPMLALNRPQDT-------------------------GSDNGRVGG--GGARKGSGWVTNGSRG 404

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5JG24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG24_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.390e-61
Identity = 170/330 (51.52%), Postives = 203/330 (61.52%), Query Frame = 1

Query:  367 PQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEGGG--VSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFLTSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLPGEADEDDGEGSHAKMYTSPLSGKWSANMPRAEKSKRDGYSGDXXXXXXXXXXXXXXXGLFGGWNVGGF---FESAWS-EVTPVSTLLALTLLWGGAKARSFAQRRH---FEAKLRGIEVERPIVRFNAGG-WSVKQEALGSAGTCPICLDTFAVPSSEVQTPCNTVGACTVGEGLIDADGVVVATLP-CGHSFCR 1323
            P+G  GG  V   +L  GG        GV+           GGG  V+A+ FARGV D WR+GK GCDNGF+LVAS+ DR+FAISVGKGLE++L  +DRNAALNAMKPLLREGDWD A+L  LEEI+ RL  +L   A   DG G+ A    S L   W     RA           XXXXXXXXXXXXXX   F G+++GGF   F   W  +V P S LLAL+LLWGGA AR+  QRR    FEAKL GIE +R ++  +AGG WSV Q+AL S G CPICLD F    SE     +  GA T  +GL+ AD +  ATLP CGH+FC+
Sbjct:    6 PRGGAGGGGVGINVLNKGG--------GVV-----------GGGEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLGLEEIHRRLFENLAKAAGGGDG-GAGA---LSSLGWGWEDLKRRASGGWXXXXXXXXXXXXXXXXXXXXX--XFRGFHLGGFENSFGENWKLDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAGGGWSVGQDALASRGVCPICLDAF----SEAA---DGSGADT--KGLVGADRMPAATLPDCGHTFCQ 301

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.100e-31
Identity = 145/503 (28.83%), Postives = 210/503 (41.75%), Query Frame = 1

Query: 2533 SIEGVRTW-RGIQAF*NLAMFLESRRVIAFHWREGAVP*QWKYAVITTVLHEKIDRRTERRYYRGISLVSHPGNVPSR-------SY*ETQ*LL*GQ------GAVTGGLMRVSTRLPD------HRHGVCGAQCRKLSGRQERHSSWALLSSTRRTTLSTALFYGRCSLAFEYRRRWWQSSDKF------TMG*ELVCTLITAYARIGSR*SNDSARVCAIRTAAQHFRIHADHHPPMI*QGYGHPRRANAHLKEPPTSMG--PEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRIPRTM--------MLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRIFFSLSSGHSARDQ----AIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDGSCQSESCSGTLRG 3918
             I G   W R IQ +    +      ++   W  G +P +WK A  T VL++K DR +    YRGISL+SH G VP +       ++ E   +L  +      G  T  ++ V  RL +       R  +C     K     +R   W +L+   R  +   L           R R     ++       T G    C L      I      +   V  IR +     +                 R+   L+E  T  G   E  +D V  AV GML ADDA +VSR A GLA+MM  IVE    F   +S  + + L M     P T         + +EA GQ Y     F Y GG + +  D+  EI  R+R  W  +R   REL+D+PK     + R+++AEA+EA+LYG    +    HY  LR++  R+ F +      +D     +  R L+  EC+S+E T+R RR+++ G L R  DG        G L G
Sbjct:   16 EIVGGEIWSRSIQTY----VLGHLHTILVKVWNGGDIPREWKDA--TKVLYKKGDR-SNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKRRLYMCFVDLNKAYDSVDREMLWKVLA---RAGIPAKLIEVIRQFHDGMRARVRMDDEELSDWCFVTQGVRQGCVLSPLLFNIFFA---EVLEVVVIRFSEDDVVL-----------------RSLVCLEEGKTEAGGGEETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPATTSQPASPPPLTIEAAGQEYAQTTEFQYPGGLVNDHGDLTREINCRSRGAWACLRRYGRELFDRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLFRVIGYKLKKDTYRQLSYPRTLERVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAG 488

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5JBT6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT6_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 3.490e-28
Identity = 88/258 (34.11%), Postives = 128/258 (49.61%), Query Frame = 1

Query: 3238 GPEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRI------PRTMMLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRIFFSLSSGHSARDQ----AIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDGSCQSESCSGTLRGRCGEDGVGRRKSGSIACRAT 3978
            G E  +D V  AV GML ADDA +VSR A GLA+MM  IVE    F   +S  + + L M   +       P   + +EA GQ Y     F Y GG + E  D+  E   R+R  W  +R   REL+D+P+     + R+++AEA++A+LYG    +    HY  LR++  R+   +      +D     +  + LK  EC+S+E T+R RR+++ G L R  DG        G L G   + G  R ++G   C  T
Sbjct:  132 GEETPLDRVQRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRKGQADTSQPAPPPPLTIEAAGQKYAQKTEFRYLGGLVNEHGDLTRENNYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMDALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGRSDVGGDRNRTGRSVCSTT 389

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.790e-27
Identity = 140/494 (28.34%), Postives = 211/494 (42.71%), Query Frame = 1

Query: 2593 LESRRVIAFH-WREGAVP*QWKYAVITTVLHEKIDRRTERRYYRGISLVSHPGNVPSRSY*ETQ*LL*GQGAVTGGLM---RVSTRLPDHRHGVCGAQCRKLSGRQERHSSWA---LLSSTRRTTLSTALFYGRCSLAFEY--RRRWWQSSDKFTMG*ELVCTLITAYARIGSR*SNDSARVCAIRTAAQHFRIHADHHPPMI*QGYGHPR--------------RANAHLKEPPTSMGPEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRIPRT------MMLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRIFFSLSSGH----SARDQAIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDGSCQSESCSGTLRGRCGED-GVGRRKSGSIAC 3969
            LE  R I    W  G +P +WK A+I  VLH+K DR +    YRGISL+SH G V +++             +T  L      +  LP+        QC    GR      +    L    RR  +   + +     A++   R   W+   +  +  E++  +   +  + +R   D   +       Q  R      P +    +  P               R   +LKE       E  +D V  AV GML ADDA +VS+ A GLA+MM  IVE  R F   +S  + + L M      R       ++ +EA GQ Y     F Y GG + E  D+  EI  R++A W  I+    EL+D+P      + R+++AEA+EA+LYG    +  + HY +L+T   R+   +        + R  +  + LK   C+S+E TVR RR+++ G + R  DG        G L G  GED G G  +   + C
Sbjct:  839 LERLRAIFVEVWNGGEMPQEWKDAIIK-VLHKKGDR-SNCNNYRGISLLSHVGKVLAKT-------------ITNRLSAFCEANEILPEE-------QCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKE--EERRGEGLLDRVRRAVWGMLYADDAGVVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXXVLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVG--GEDPGQGNPEQNWLTC 1306

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.120e-27
Identity = 138/472 (29.24%), Postives = 200/472 (42.37%), Query Frame = 1

Query: 2623 WREGAVP*QWKYAVITTVLHEKIDRRTERRYYRGISLVSHPGNVPSR-------SY*ETQ*LL*GQ------GAVTGGLMRVSTRLPD--HRHGV----CGAQCRKLSGRQERHSSWALLSSTRRTTLSTALFYGRCSLAFEYRRRWWQS----SDKF--TMG*ELVCTLITAYARIGSR*SNDSARVCAIRTAAQHFRIHADHHPPMI*QGYGHPRRANAHLKEPPTSMG--PEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRIPRTM--------MLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRIFFSLSSGHSARDQ----AIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDGSCQSESCSGTLRG 3918
            W  G +P +WK A I  VL+++ DR +    YRGISL+SH G VP +       ++ E   +L  +      G  T  ++ V  RL +   R  +    C     K     +R   W +L+   R  +   L           R R        SD F  T G    C L      I      +   V  IR +     +                 R+   L+E  T  G   E  +D V  AV GM  ADDA +VSR A GLA+MM  IVE    F   +S  + + L M     P T+        + ++A GQ Y     F Y GG + E  D+  EI  R+R  W  +R   REL+D+P+     + R+++AEA+EA+LYG    +    HY  LR++  R+   +      +D     +  + LK  EC+S+E T+R RR+++ G L R  DG        G L G
Sbjct:  131 WNGGDIPREWKDATIK-VLYKQGDR-SNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGCRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMVWKVLA---RAGIPAKLIEVIRQFHDGMRARAGMDDGELSDWFFVTQGAGQGCVLSPLLFNIFFA---EVLEVVVIRFSEDDVVL-----------------RSLVCLEEGKTEAGGGEETPLDRVRRAVWGMSYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTISQTAPPPPLTIKAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPSRLKIRLLQAEAMEALLYGCMTWSPLSRHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRFECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAG 577

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 4.140e-27
Identity = 134/476 (28.15%), Postives = 203/476 (42.65%), Query Frame = 1

Query: 2593 LESRRVIAFH-WREGAVP*QWKYAVITTVLHEKIDRRTERRYYRGISLVSHPGNVPSRSY*ETQ*LL*GQGAVTGGLM---RVSTRLPDHRHGVCGAQCRKLSGRQERHSSWA---LLSSTRRTTLSTALFYGRCSLAFEY--RRRWWQSSDKFTMG*ELVCTLITAYARIGSR*SNDSARVCAIRTAAQHFRIHADHHPPMI*QGYGHPR--------------RANAHLKEPPTSMGPEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRIPRT------MMLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRIFFSLSSGH----SARDQAIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDGSCQSESCSGTLRG 3918
            LE  R I    W  G +P +WK A+I  VL++K DR +    YRGISL+SH G V +++             +T  L      +  LP+        QC    GR      +    L    RR  +   + +     A++   R   W+   +  +  E++  +   +  + +R   D   +       Q  R      P +    +  P               R   +LKE     G    +D V  AV GML ADDA +VS+ A GLA+MM  IVE  R F   +S  + + L M      R       ++ +EA GQ Y     F Y GG + E  D+  EI  R++A W  IR    EL+D+P      + R+++AEA+EA+LYG    +  + HY +L+T   R+   +        + R  +  + LK   C+S+E TVR RR+++ G + R  DG        G L G
Sbjct:   55 LERLRAIFVEVWNGGEMPQEWKDAIIK-VLYKKGDR-SNCNNYRGISLLSHVGKVLAKT-------------ITNRLSAFCEANEILPEE-------QCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKEEERRGGG--LLDRVRRAVWGMLYADDAGVVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXXVLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVG 506

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5L6A1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A1_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 9.030e-27
Identity = 84/227 (37.00%), Postives = 120/227 (52.86%), Query Frame = 1

Query: 3238 GPEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRIPRTM--------MLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRI----FFSLSSGHSARDQAIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDG 3879
            G E  +D V  AV G+L ADDA +VSR A GLA+MM  IVE    F   +S  + + L M     P T         + +EA GQ Y     F Y GG + E  D+  EI  R+R  W  +R   REL+D+P+     + R+++AEA+EA+LYG  A +    HY  LR++  R+    F    +  + R  +  + LK  EC+S+E T+R RR+++ G L R  DG
Sbjct:  211 GEETPLDRVRRAVWGVLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPIPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMAWSPLSGHYQTLRSIHHRLLLRGFGYKRTKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDG 437

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 9.820e-27
Identity = 139/494 (28.14%), Postives = 211/494 (42.71%), Query Frame = 1

Query: 2593 LESRRVIAFH-WREGAVP*QWKYAVITTVLHEKIDRRTERRYYRGISLVSHPGNVPSRSY*ETQ*LL*GQGAVTGGLM---RVSTRLPDHRHGVCGAQCRKLSGRQERHSSWA---LLSSTRRTTLSTALFYGRCSLAFEY--RRRWWQSSDKFTMG*ELVCTLITAYARIGSR*SNDSARVCAIRTAAQHFRIHADHHPPMI*QGYGHPR--------------RANAHLKEPPTSMGPEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRIPRT------MMLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRIFFSLSSGH----SARDQAIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDGSCQSESCSGTLRGRCGED-GVGRRKSGSIAC 3969
            LE  R I    W  G +P +WK A+I  VL++K DR +    YRGISL+SH G V +++             +T  L      +  LP+        QC    GR      +    L    RR  +   + +     A++   R   W+   +  +  E++  +   +  + +R   D   +       Q  R      P +    +  P               R   +LKE       E  +D V  AV GML ADDA +VS+ A GLA+MM  IVE  R F   +S  + + L M      R       ++ +EA GQ Y     F Y GG + E  D+  EI  R++A W  I+    EL+D+P      + R+++AEA+EA+LYG    +  + HY +L+T   R+   +        + R  +  + LK   C+S+E TVR RR+++ G + R  DG        G L G  GED G G  +   + C
Sbjct:  552 LERLRAIFVEVWNGGEMPQEWKDAIIK-VLYKKGDR-SNCNNYRGISLLSHVGKVLAKT-------------ITNRLSAFCEANEILPEE-------QCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKE--EERRGEGLLDRVRRAVWGMLYADDAGVVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXXVLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVG--GEDPGRGNPEQNWLTC 1019

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BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.240e-26
Identity = 85/240 (35.42%), Postives = 122/240 (50.83%), Query Frame = 1

Query: 3238 GPEPAMDCVN*AV*GMLNADDAYIVSRPARGLAKMMVAIVEA*RSFA*-LSRSRRQILCMPPSRIPRTM--------MLVEATGQTYK*VQYFTYGGGAIPEILDMPTEIARRTRAWWIRIRPSRRELYDKPKETLSSETRMIKAEAIEAVLYGYCARTLCQEHYSILRTVQDRIFFSLSSGHSARDQ----AIDRVLKMNECESIEITVRSRRVMWVGTLIRMSDGSCQSESCSGTLRG 3918
            G E  +D V  AV GML ADDA +VSR A GLA+MM  IVE    F   +S  + + L M     P T         + +EA GQ Y     F Y GG + E  D+  EI  R+R  W  +R   REL+D+P+     + R+++AEA+EA+LYG    +    HY  LR++  R+   +      +D     +  ++LK  EC+ +E T+R +R+++ G L R SDG        G L G
Sbjct:  265 GEETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPAPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQMLKRVECQRVEATIRQQRLLFAGALERQSDGRLPKRLMFGELAG 504

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig994.24053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D7FR26_ECTSI	1.400e-72	39.40	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JG24_9PHAE	2.390e-61	51.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JLT1_9PHAE	1.100e-31	28.83	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JBT6_9PHAE	3.490e-28	34.11	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K319_9PHAE	1.790e-27	28.34	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KS82_9PHAE	3.120e-27	29.24	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KA81_9PHAE	4.140e-27	28.15	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5L6A1_9PHAE	9.030e-27	37.00	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5K7U5_9PHAE	9.820e-27	28.14	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KBT2_9PHAE	1.240e-26	35.42	Reverse transcriptase domain-containing protein (F...	[more]

Pages

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig994.24053.1	prot_P-canaliculata_contig994.24053.1	Pelvetia canaliculata dioecious	polypeptide	P-canaliculata_contig994 4534..13195 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817353.97758-UTR-P-canaliculata_contig994:4491..4533	1622817353.97758-UTR-P-canaliculata_contig994:4491..4533	Pelvetia canaliculata dioecious	UTR	P-canaliculata_contig994 4492..4533 +
1693495242.5339594-UTR-P-canaliculata_contig994:4491..4533	1693495242.5339594-UTR-P-canaliculata_contig994:4491..4533	Pelvetia canaliculata dioecious	UTR	P-canaliculata_contig994 4492..4533 +
1622817354.0582762-UTR-P-canaliculata_contig994:13195..15877	1622817354.0582762-UTR-P-canaliculata_contig994:13195..15877	Pelvetia canaliculata dioecious	UTR	P-canaliculata_contig994 13196..15877 +
1693495242.6162608-UTR-P-canaliculata_contig994:13195..15877	1693495242.6162608-UTR-P-canaliculata_contig994:13195..15877	Pelvetia canaliculata dioecious	UTR	P-canaliculata_contig994 13196..15877 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817353.9894032-CDS-P-canaliculata_contig994:4533..4639	1622817353.9894032-CDS-P-canaliculata_contig994:4533..4639	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 4534..4639 +
1693495242.5453756-CDS-P-canaliculata_contig994:4533..4639	1693495242.5453756-CDS-P-canaliculata_contig994:4533..4639	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 4534..4639 +
1622817353.9998462-CDS-P-canaliculata_contig994:8217..8371	1622817353.9998462-CDS-P-canaliculata_contig994:8217..8371	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 8218..8371 +
1693495242.5543673-CDS-P-canaliculata_contig994:8217..8371	1693495242.5543673-CDS-P-canaliculata_contig994:8217..8371	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 8218..8371 +
1622817354.012221-CDS-P-canaliculata_contig994:8705..9021	1622817354.012221-CDS-P-canaliculata_contig994:8705..9021	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 8706..9021 +
1693495242.5668998-CDS-P-canaliculata_contig994:8705..9021	1693495242.5668998-CDS-P-canaliculata_contig994:8705..9021	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 8706..9021 +
1622817354.0257273-CDS-P-canaliculata_contig994:9376..9864	1622817354.0257273-CDS-P-canaliculata_contig994:9376..9864	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 9377..9864 +
1693495242.5790691-CDS-P-canaliculata_contig994:9376..9864	1693495242.5790691-CDS-P-canaliculata_contig994:9376..9864	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 9377..9864 +
1622817354.0374908-CDS-P-canaliculata_contig994:11860..12079	1622817354.0374908-CDS-P-canaliculata_contig994:11860..12079	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 11861..12079 +
1693495242.589073-CDS-P-canaliculata_contig994:11860..12079	1693495242.589073-CDS-P-canaliculata_contig994:11860..12079	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 11861..12079 +
1622817354.047717-CDS-P-canaliculata_contig994:12279..13195	1622817354.047717-CDS-P-canaliculata_contig994:12279..13195	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 12280..13195 +
1693495242.6018798-CDS-P-canaliculata_contig994:12279..13195	1693495242.6018798-CDS-P-canaliculata_contig994:12279..13195	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig994 12280..13195 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-canaliculata_contig994:4492..15877+
coding sequence from alignment at P-canaliculata_contig994:4492..15877+

protein sequence of mRNA_P-canaliculata_contig994.24053.1

>prot_P-canaliculata_contig994.24053.1 ID=prot_P-canaliculata_contig994.24053.1|Name=mRNA_P-canaliculata_contig994.24053.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=733bp
MRPQQHLCMRSYLHRVRIVLLLVYAVLHRVLSHRGDDGGETVQNGWSVEF
LPSPTRDPKGCGRPGKFVEGSFVCDPDGLLTLSGAERIEEKLEDMSGLRS
PCGDGGDVPQGVEGGVAVVSRILASGGDGVNKKPRGVLSMLERTRSELEG
GGVSADWFARGVHDSWRIGKHGCDNGFLLVASQADRTFAISVGKGLEQFL
TSKDRNAALNAMKPLLREGDWDAAILKALEEINGRLRRSLPGEADEDDGE
GSHAKMYTSPLSGKWSANMPRAEKSKRDGYSGDGDGDGGGGGGGGGGGGL
FGGWNVGGFFESAWSEVTPVSTLLALTLLWGGAKARSFAQRRHFEAKLRG
IEVERPIVRFNAGGWSVKQEALGSAGTCPICLDTFAVPSSEVQTPCNTVG
ACTVGEGLIDADGVVVATLPCGHSFCRSCLERWHKIGSGAKGPCQSTTSH
VNSPCPICHEATPALGDPRLACTRRTSRRSLRPRGEAGSVKFSWEGDSSV
ARGRPSSDLGSSGRMGLRFMWTGSNRGGREVTGRNVSPPPPPPPPPKSRS
IGGSPDGVPLTPVKVAPRGMRTDKGGRVRERMAPTMIPGYLRQTDESSSR
QRVNREVAFRLASLGSQYPAFVDDRIVNRWLSNDKSSSWSRDPLLVRNHR
QGIFGRMRIPKAHFSSWSGDPFLPTNYRSDINGGMGGHPGSWEKGSGWVS
NRSRGDCNGGAFSEEHKHYSGGSSASATSGEW*

mRNA from alignment at P-canaliculata_contig994:4492..15877+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-canaliculata_contig994.24053.1 ID=mRNA_P-canaliculata_contig994.24053.1|Name=mRNA_P-canaliculata_contig994.24053.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=11386bp|location=Sequence derived from alignment at P-canaliculata_contig994:4492..15877+ (Pelvetia canaliculata dioecious)
AGACTAAGGGGGCTATACATAAATTACCAAAAGCTACTGACGATGCGGCC
GCAGCAACACCTCTGCATGCGGAGCTATCTACATAGAGTGCGCATTGTCC
TCCTCTTGGTTTACGCTGTCCTACATAGAGTGCTCAGCCACCGCGGCGGT
AAGTCCTTCTACATTTTGTAGTACGGAATAAACGTGTGGGGAGACTTTTC
AGGGCGCGCTGGTACGAGTACGTGCGTAGTCCCCTAGAACACCTTTTGTT
CAGCAGTAGATCGATGTTTCTTGTGCCGCGATCAACGCCTCAACTAATGA
CTCGCCAACATCCCCCAAGATGATGCCCCTTGGTGAAGTGAGTCCCTCGA
GGAGATCATTTCCCCACGGTCGATGGCTGCTTCCTTCGGGTGCCTCTGCT
GCCTCTACGATTATCATCGTCAGCTTGGAAGCTTGAACTTCAAGGACTGT
GGAACCGCTGCTCACGTAAGGATAGTTACTAGTCCCTCGAGGGTCTCATC
GACACGGATCTATCTCCATTAGACTGTGTGCTCCATCCTCTTAACCCATG
TAAGGTCGAGCATGCGCTCATGGTTTGTGTAGTTGTGCGATACTGTAACA
CCTGAGCTAAGTCCTGAGCCGAGGAAAAACCTCACTCAGAGCACTGATTG
ATACTGTAATAATTTCCCAATCCGCTTCAGACAAGTACCGCTTTTCATCC
TCCAACATATTCAACGACCAGCTCATCTTCATACCAATTTAGGTTGTGGG
AAAGAGAGGCGCATGTGACCGGTCGCCCCGGTAATTCAGTTGGTAACCTC
GAAATATTCTGACGTTGGGACGTTGGGACGTGAGTTCGAATCCCGGTGTC
GTCACACGAACTGGGATTTTTCCTCACAAAAAACAAAACAAAAAAAAGCC
CAACAAGTGGAGAAAGATTAAATCGTCATTAATAGTATAGTCGGCGGTCC
TATGTAGCGGCACCGTGAAAAGCGGAATGCCCTGAATAGCGGTACCACAA
TCGCTTGGCACATATGCACCCCTATAGAGCGGCACATATATAGCGGCACT
TGTGCCGCTATATAGGACGGGACTCTATATACTGTAGCTGCGGAGCCCTG
TTGTGCATCGCTTTAGTGCTACTGCTAGTTCTGTACGCTTCGTTGCTCTG
TTGTGCATTGCTTTACTGTACCGCAATGCTATGATGCTGCTAGTGGTGGC
GTAGTGTTGTAGAGTACTGTACAGTACATAGTACTGTACCAAGATGGTCA
TGATTTCTGACTGAGCCAACTAAACAATAATAATAATAATAATAACAAAA
ATAATAACAAAAATAATATTATTACAATAAATAATACTGTAATAAATTTG
CGTGCGGCTGAAATCATTTGACCCTTTTTCCAACATCAGGAATTTTGGTT
AGGGAACGGATGACGCAAACGAGAGGTAGTTTGTATGAAAAAGTACTGCG
TCCTTGCCGCTTTCATCCTCAATAGCGGTATTCATGCCGCTATTGAGGAA
TAGCGGAATAGTGCCGCTATTGAGGAATAACGGCACTGCCCCGAATAGTG
GCAATAGTTTATCTTGTCACTAAATGCCGCTATAGAGGACCGCTGAGTCG
ACAGCTTCACGGTCGACGAGGGAAAGGAACGGCTGAATCGTTTTCGCCAG
AAAAATCAAGTGAAATGCCGCAGAAGGAAGGAGGAGACATCGTGACATAC
TTTGTGACCTTCCTTCTGTCAAACCCGGGGGCTGGTACGTCCACAAACCT
GACGTCCAGAATAAATGAGATGACAACACACACACACACACACACACACA
CACACACACACACACACACACACACACACACACACACAACACACATACAC
ACACACACACACACACACACACACACACACACACATACAACACACATATT
GATTGGTCCATGGTGACCTGTCGAGGCAGCACTCGTTCGGAACTACCTCG
AGGTTTCTGGCCCTGTGCCGGCGGACTCTCGGCATTGAACACTATCGGTA
CGCAATTGCGTGACCCGATAAAGTCGGGCCTTACCCGATGGCATATGGCG
GTTTCAAATTAAGAAATGGACGTCGGCGCGGAACTCGGGAGGAATCCCGT
AAGCACCAGATTCAGCCTGAGTGTGGAGATGAGCAGGCTGACGCGGGACG
GAACCGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGCGGA
CAGGGATTTCCCCCCCCCCCTGTTCAGCTGACCACAAGCAGGATACGCAA
CCTTACCCGGTTGATCCATACTCTTGCTATATGTGTGATAATACATACAT
AATCGGTCCGTCGCGCGTCCGTATAAGGAATCCTTCCACTCGTCGGCTAG
GCCAATGGGTGTCGATTCGCAAAATTCTACGCCTCCGTGTGCGATAACAA
CTTTCCCAGTCTCGTTACCTCTGTCTTTTCCTGGCGATGTCTAGCAACGT
CACCTCTTCTTTCCTCCACGCGGCCATGAATCTCCGCCCACCCTCCGTGA
CCGTATCACCCCACACCTGAGCCTTTAACGCCGTCGCTTTCCAAGCCTCC
GTTATGCCAAACGCCCGGATTTCGCTCTGTAGGAATCGGTCAACTCTTTC
TCCTTCCCACCCCGTACTCTTCGCACTGCACCCTCAAGGTTTCCGAACAC
GATTCGCTTTGGCAGCCGCCCGCCGCTCATTCGGATGAGCGTTCCAACCC
CTCAAAAGTCTTCTCGTGTACAACGTTGTCTCAATGGTCTCGCACCGGGT
TATCTCAAGGCCCACCGGGTCTTGCTTCGCATCATCGGAGCACAGCGCAA
GAGGAAAGACCATCGGATGACCCTCGAGATCTTCTCTCTCAAGCGTTAAC
TCAGTGACCACGTGGTGTTATGTGTTATATCGGGTATATAGTACTATAAA
TAGTGCTGCACTTGTCTGCCGCGTATCTTGTTTCTTCAGTATTGATTTTT
ATTTCACAAACCCTGACCTTCCTTTGTTGAGCCAAGTTAGACCAAACTTC
GTGGATACAGGGTTCTCAGCCATGTGCAGGAAGGCAAGCATCCGTATTAA
TACCGCAGGTGGTACTACAGTAACTGCACGGTATCATCCATATGTCATTG
GTGACCTCCTAAGCTAAGATGTGCATGATGGTATTAGCTCACTCCTATAG
CTCACTGTTGCAAAATTTTAGGCTTACCATCGATCCAAGCAAACTTTGAT
CTACAGCAGTACAGTATGCTGTACGAGTACTGCACAGGGTGCAGTATTTT
TCAAAGAAAAATATGAACGCATCTGGACCTTCGGAGCATCCTCTATTACA
CTCGTGTTCACTTTCCTCAACAAGCGACGGGCTCGTTAACGAAGGGCTTC
CTGAAATATTACGTCATCGATCGTCTTGCGTAGCATAGTATTGTTAGTAT
TGCTAGTACCGAGGAGCGCCTGCGTCTGTTTGTAGCCTGGCCCAGGAAAG
CACGACCACGAGCTAAAAAAAGAAAATAAAAAAAAGAGGGAAAATCTCCT
GTAGGAACAGGCAGTGGTGTACGACGGTGTCGATTCTGCAGTCAGTCCGC
GAACTGTACTCAAGTGCCTGAACGACGTTCAATACGCCTAAGCGGCGCCA
TCTTTACGTTAGAGCGTTGATTCTGGCGAACACGAGTCTCTTGTCTCTAC
CCGTCGGGCCGTGATTTGTGCCGTTGCCGTTGTGCCGTTGCCGTTGTGCC
AACCCGTTCAAACCCATCGAATCCAGACGATGGCGGCGAAACGGTTCAGA
ACGGGTGGTCCGTGGAATTCTTGCCGTCTCCGACGCGCGATCCCAAGGGC
TGCGGACGACCGGGGAAGTTCGTGGAGGGGTCTTTCGTGTGCGATCCCGA
CGGGCTTCTTACTCTTTCGGGGGCAGAGAGGTAGGCAGTGCTTTGCAGCC
ATCCGTGCACGACACGACCCGTCGGCCGGGTGTTTACACCCGAGACCATT
TCTGTGGCTGTTATAAAGAGCATGTAAGAACGATGCAGCGCCAAGGGGTC
GTGGAAGGCCCAGGCGTCGAAGGGCACATACTCACGTCGTCGCTACGGCG
AGAGGTGTTCACAGGAGAAGCATCGGGCAATGATTCGCGGGCTGAAAAAC
GAACCCGTCGTAGTCCTGTAAATGTCTCTTTCTTGTCATTTTACAAATCT
CTGGTCTTGGCTGCCGCGAGCATCTGATGTAGACCGATCTTGACGCGCTT
GTTTGTCCCCGAAGGATCGAGGAAAAACTGGAAGATATGTCCGGCCTTCG
GAGCCCGTGCGGAGACGGAGGAGATGTCCCGCAGGGGGTCGAGGGAGGCG
TGGCGGTAGTGTCACGGATACTTGCCTCTGGAGGCGATGGCGTGAACAAG
AAACCCCGCGGGGTTCTGAGCATGTTGGAGAGAACACGTTCGGAGTTGGA
GGGAGGCGGTGTTTCCGCGGACTGGTTTGCAAGAGGTGTGCACGATTCTT
GGCGAATAGGGAAGCACGGATGCGACAATGGGTTTCTTCTCGTGGCTTCC
CAGGCGGACAGGACGTTCGCCATCTCTGTGGTGAGCTCCGCAGTAAAGCA
AGCGCGGCCGCGTACCTTAAATGGGTTACTTTTGCCCGTTTCACAAAAGC
GGGGAGAGATGATTAGATTCTCTTAGCGTTGCGACTGGGTGGGATTGAAT
ACGTGACACGTTCCTTGGCTTCATTGGCAGCAAAATGTCTAGTAAGTACA
TTTGCAATGTGCTCCCTTTTTGTGGGCACGCTGCTCTTGTCACGTGTTGC
ACTCCCAAGTACCTACGGTGAGCTATTAGCCGTCACACGTAATTTTTTAG
ATCAGTTTCCGAAAGCCCGTGTAACTTGCGTCTTTGGTGGCCATCCGGAT
CCTGAATCTGACCACACCTGAAAACGCTCCGCCAGGGTAAAGGACTCGAG
CAGTTCCTCACTTCCAAGGATCGGAATGCAGCGCTCAACGCCATGAAGCC
CCTCCTGCGAGAAGGAGACTGGGATGCCGCCATCCTGAAGGCACTGGAAG
AGATAAACGGGCGTCTCCGGAGATCACTCCCCGGTGAAGCCGATGAGGAT
GACGGCGAAGGTTCCCACGCCAAGATGTACACGTCGCCGCTCAGCGGCAA
GTGGAGCGCAAATATGCCACGTGCGGAGAAAAGCAAGCGTGACGGGTATA
GTGGCGACGGAGATGGAGATGGAGGCGGCGGCGGGGGGGGTGGAGGTGGA
GGTGGCTTGTTTGGAGGTTGGAACGTAGGGGGATTCTTTGAAAGCGCCTG
GTCGGAGGTCACTCCAGTCTCCACGCTGCTGGCTTTGACGTTGCTGTGGG
GCGGAGCGAAAGCCCGGAGTTTCGCACAGAGAAGACATTTCGAGGCCAAA
TTGAGGGGGATCGAAGTCGAGAGGTATGCACGAAAGAGCAGGGACGAAAC
AAGATATGTCTCCCCGCTGACGAACGAATTCGTTCTCCCTGTGACATGAT
TAAGAGTTCGTACATTCATTGCAGTCACTCCCAAGCTATCGCAGAGATGT
CAAGGTACAGTATTACCAATTCGGAGCGTCGCTGCTGTGTTGTGGAGTGA
AGATTTCCGTTTTCGGGGTAAGCATCGTCGCACTCCTTTACTAACTCTCG
TCAGGTAATTTTTTTCTTCTCCTTGAAAACAATGGAAATTATCACTTGTC
ATTCTTTGGAACTTTCTTAGAACTTTAGTACTGAATCGCAAGCAGTACCT
GCCACCTCGTCCGAACCATCCAGGCCATCTAGTGCCACAGATGATACAGT
TTTGGTTGATTTCGTTTTAAGACTGTAAGAAGTTGATTTTGTTTTGTCTG
GTCAACGTGGGTCTGGATTACGAGATCCTGTTTCATTCACTTCATCTAGA
TGTTGAAAACCTGCTCCGGAAGATTGAATAAAGTACTGCCTCAGTCCAGG
CGACCAGATGTCTCGGTCAGAACAACCAGGGTCTGGTTATCGGGGTGGCT
TGGGCCAGACGCGTGGATGATCTGGTTAGTCGAGTCCATAGATATGATTG
GATGGGATAAGTGTCTCCTCTAGGTCCACCCATCTGTTCTGATCAACCCG
AACATGGATGACCTGGACTTTCTGACCTAGATTTCTGGTTATTTTTTTAT
CATCTGGATCATCTGGATGGTGTGAGTAACGGGTATGGGAAGGGTGAGCC
AGTCCCCACCCATAAGTCCCCATCCATATTTGTACGGTCAGACCATACGC
CATCTATAATATCTCGAATCTGAATATGTTTGGCCCAGTATTTTGGCTGG
TCTGCTCTTATGATACCGTAGTATTCTATATATGTATAGTCTGGAGGGGC
TTCATAGGATATTTGCTTGCCGAACCAGATGGTGGATGGTTACTCCGCTG
ACCCAGAATACGGGAAGTTTTGTCTGATCTGGCCCAGAATCCAGGTTAGT
ACAGTTGACCTGACCCAGACTCTCGATCATCTGAATAGTCCAGATGTCGG
GTACACTGTATGACTTAAATAATCCACGGAGATGACCAAACAGACTTTCT
AGACCATGTAGACCTTCCATAATCTCGGCTTCCGTCAGGGTTTTTCAGGC
CTAGCTTTCTGGATAGCCTTGATCGTCTGAAAGGAATGGTTGACCTTTTA
GGCCAACAAGGCCAATCAGACCATCCAGATGTAGCAGATCAAGCAGTTCG
TGCGGAGTTCTGGGTTAATAATGAAGACCTGTCAGATACAACACACCCTC
CAGAAGTGTTATACAAACCAAACAGGATAATCCAAAGGTCTGATCATCAT
GAAGCTCATCAGCCAGGAAGATGGCACATGATTGAGTCTGAATTGCGGGT
CTCGTTGATCTGGCCTTGACCTATGTATGGTCTGGTTGATCTGGCTAGTT
AATGGTGGCTCGGCGCAAACATCTGAATGATTTGGTTGGCCTGGTCAATA
GCTATGCATATTTTGGGTGCTATAGCTCTGAGCCAGGTCCAAAGTTCTGG
ATAGTCAGGATAGTCTGAGCCAGTTATCGAAACTCTTCCAGACCATTCCG
ATTATCCAAACGTCTGACCATGACAATCCAATCCGGCGTTATTTAGGGCG
CACCATCCAGATCACTCAGAATTCTGGTTCAGAACGCCTACATCATAATC
ATTCTGGGTCGGACTCACAACAACGACCAGGATTCTGGATTTTAATATCC
AGACAACCCATACGGCTGGCCCATATCACCCAGAAAGTAAGACCATACTA
TCAAGACCATCTAGTACGCAAAGCCACTGGATGTTCTGGCCAATACTACT
GGTACGGACTAGCTAACAGGGCAGTCCTGTCTGCCGGAAGCCCCTTGCTG
CATCGATAGTCCCGTTTATGACTCAGCTCAGTTCATTCGGCCATTCACGC
TTTCTTTCTCTCCGGCCAGACCTATCGTGCGATTTAACGCCGGGGGATGG
TCCGTCAAACAAGAGGCACTAGGCTCTGCTGGGACGTGTCCAATCTGCCT
CGACACCTTCGCGGTGCCATCTTCGGAGGTACAAACGCCATGCAACACCG
TCGGGGCCTGCACTGTCGGCGAGGGATTAATAGACGCAGACGGAGTAGTG
GTTGCTACCCTGCCTTGCGGTCATTCTTTTTGCCGAAGGTGAGTAGTTGA
TTAGCCCCCCCCCCCAAGAGTGAGACACGGTTCCAAAGGCGTATATGCAT
GAGGTGTGCAAGAGATGGAACGCTTAACTGTTATCTCTTCAGCGAAAAAA
AATCGTGACATTTTCTCCCAGAAGCTCTTTCCTTACTGAGCTTTTATTTA
CGCCCTCGTTGCCGCCTTCTAACGGTGCCCCGGCGTAGCTGCCTCGAACG
ATGGCACAAAATTGGCTCTGGCGCGAAAGGCCCTTGCCAGAGCACAACGT
CCCACGTAAACAGCCCGTGTCCCATATGCCACGAGGCGACACCTGCTCTT
GGCGATCCGAGACTCGCTTGCACCCGGCGTACGTCCCGCCGCTCGCTTCG
ACCCCGCGGCGAGGCCGGGTCGGTCAAATTCAGCTGGGAAGGCGACTCTT
CCGTGGCTAGAGGTCGCCCGTCGTCGGACCTGGGCTCTAGCGGGCGCATG
GGCTTAAGGTTCATGTGGACGGGATCAAATCGTGGGGGTCGAGAGGTGAC
CGGCCGAAATGTGTCCCCACCACCGCCCCCGCCGCCGCCTCCGAAATCGA
GGTCCATAGGTGGATCTCCTGACGGCGTTCCGTTGACGCCAGTGAAAGTG
GCGCCGCGAGGAATGAGAACGGACAAGGGGGGTAGAGTGAGGGAGCGGAT
GGCTCCGACCATGATACCAGGGTATCTGCGTCAAACCGACGAAAGCAGCT
CGAGGCAGCGGGTGAACAGAGAAGTTGCATTCCGACTGGCTTCACTGGGG
TCTCAGTATCCCGCGTTCGTTGACGATCGGATCGTCAACAGATGGCTTTC
AAATGATAAGTCTTCCAGCTGGAGCCGGGACCCATTGCTCGTGAGGAATC
ATCGACAGGGTATATTCGGTCGCATGCGGATTCCGAAGGCCCACTTTTCC
AGCTGGAGCGGGGACCCATTTCTCCCTACGAATTATCGATCGGATATAAA
CGGCGGCATGGGCGGTCATCCCGGGAGCTGGGAAAAGGGTAGTGGCTGGG
TTTCCAATCGCTCGCGTGGCGACTGTAACGGTGGCGCATTCAGCGAAGAA
CATAAACACTACAGCGGCGGCTCCTCCGCTTCGGCTACCAGCGGTGAATG
GTAGTTTTTTTTCCGGTTGTATGCTAAGAGGTGGGATATTTATCTTATCA
TGCCAACAAACGGTCACAGTCGTTGATAGAGGTGATGCGGCAGCTACTCA
ATTGGTGCGGCCCGGAGACCACAACAAAAGAGTTTGTTTTGTACTGGGGG
CGCTCGATTACAGATCTCCTGGCTAGCAGTCAAGGCCCATAGGGATAATT
ACCAAAAAAGATGACAAGTACACGAGCGATTGGTTCATATTCTGGCGTGT
TGGAGAAGCCAAAGAGCTCCCTACGCATTATAGAGGTAGAAGTATAGCAT
AGAAGGGGTCCGAACGTGGCGTGGCATCCAGGCATTTTAAAACCTGGCCA
TGTTTCTGGAGTCCCGCCGAGTCATCGCCTTCCACTGGCGCGAAGGAGCA
GTCCCATAGCAGTGGAAATACGCGGTCATTACTACTGTACTCCACGAAAA
GATCGACAGACGGACGGAGCGCAGATACTACCGAGGCATCTCGCTCGTGT
CCCATCCGGGTAACGTTCCTTCAAGAAGTTACTAGGAGACTCAGTGATTA
CTGTGAGGCCAAGGGGCTGTCACCGGAGGATTAATGCGGGTTTCAACCAG
ATTGCCCGACCACAGACATGGTGTTTGTGGTGCGCAATGCAGAAAATTGA
GTGGAAGGCAGGAGCGTCACTCTTCATGGGCTTTACTGTCTTCCACAAGG
CGGACGACACTGTCTACCGCACTCTTCTATGGCAGGTGCTCACTCGCATT
TGAGTACCGCCGCAGATGGTGGCAGTCATCCGACAAATTTACGATGGGAT
AAGAGCTTGTGTGCACCCTCATTACGGCGTACGCTCGGATTGGTTCTAGG
TGAAGTAATGACTCAGCAAGGGTGTGTGCTATCCGCACTGCTGCTCAACA
CTTTCGAATCCATGCTGACCATCATCCTCCAATGATTTAGCAAGGGTACG
GGCATCCTCGCCGAGCTAATGCGCACCTGAAGGAACCGCCGACGTCGATG
GGACCAGAACCTGCTATGGACTGTGTAAATTGAGCGGTGTAAGGTATGCT
GAACGCGGATGACGCCTACATAGTTTCGCGACCCGCGCGGGGACTCGCTA
AGATGATGGTAGCCATCGTGGAGGCTTAACGATCCTTCGCTTAACTGTCT
CGGAGTAGAAGACAGATTCTGTGTATGCCTCCGTCACGAATACCGCGGAC
GATGATGCTAGTCGAAGCGACCGGGCAAACCTACAAATAGGTGCAATACT
TCACTTACGGAGGAGGCGCTATTCCCGAAATCCTGGACATGCCCACTGAA
ATCGCTAGGCGGACCCGCGCATGGTGGATACGCATCAGGCCGTCCCGACG
TGAGCTCTACGACAAGCCGAAGGAGACTCTTTCCTCCGAGACCCGAATGA
TAAAGGCTGAGGCAATCGAGGCCGTCCTGTATGGATACTGTGCAAGGACA
CTTTGCCAGGAACACTACTCCATACTGCGCACTGTACAGGACCGGATATT
TTTCTCCTTATCATCAGGGCACAGCGCAAGAGACCAGGCCATCGACCGTG
TTCTCAAGATGAATGAATGTGAGAGCATCGAGATAACCGTGCGCTCGAGA
AGAGTCATGTGGGTGGGGACGCTAATACGAATGAGCGATGGCAGTTGCCA
GAGCGAATCGTGTTCGGGAACCCTGAGGGGGCGGTGCGGAGAGGACGGGG
TAGGAAGGAGAAAGAGCGGGTCGATTGCGTGCAGAGCGACGTCCGGGCGT
TTGGCATAACGGCGGACCAGGGAGCGACGGCTTTGGAGTCAGGGTTGTGG
ATTGAGACGGTCACGGAGGGGGGAGGGAGGTCTATGGCCTCATGCACGGA
ATAGGAGGAAGGCGCGGCTAGACATAGCCAGGAGAAGGGTGAGGCAAACG
AGGCTAGGAAAGTTGTCATGTATATAGGAGAGCGCTCAGCCTTCGGAGCG
ACACCGATTAATCTAGTAGACGAGCCGAAGGAGCCCCGCATGTGCACGAG
ACGAACCGGGACCTCCGTAGTAGCTAGGCGTATAGATGTGTCACGTGGTG
CACGTCTGACTATCTGTTGTCCTTGTTCTCTTTATCATTTACGCCCTGTG
TTGTTTTTGTTTTAACTCCGTATCAGCAGCGGCATTCATGTAAGATATAG
ATATTTTTTATCCATTTTTAGGGAAGAGGGGGAGAAGCGCTGCCAGATTT
TCTCTTTTGGTTCTCTTGTCTTTCCCCTATTAATACTATTGATAACTATG
GTAATACAGTACTATTTATATCGTTCAGCAGACCGCAAGTGGGAATGGGC
ATCGTGGTAAGTAGATTTTTTATAACCGGGGCTTCGCGCGGGCGAACGAC
AAAAAAAAGTTTTAGGGGAAAATCATTTAAAGTATTAAAATGTGGTTACT
GACTACAGAACTCCAGGTGAACACCAAGTCATGGGGGATGCAATGGAAAA
TCTGCGCTTACTACCAGTCACGTCTACTCCTCACAACAAGTGGTACGGCA
ACGGCGTGCCGATTCCTGCAAGCTACATCGACAGGGAAGACTCCTGGTTC
CGACGCTCATGCTTCACCCGTGGCGCCAGCTGCGCCGCTATTTCCCGGCG
TTTCTTCCGTCGGGATCAGGCGGGCCCCTGCATGATGGAGGGTTTTCCGC
CCTCGGCGAGCCCTCGCCCGCCTCTCTTCAATGGGC

Coding sequence (CDS) from alignment at P-canaliculata_contig994:4492..15877+

>mRNA_P-canaliculata_contig994.24053.1 ID=mRNA_P-canaliculata_contig994.24053.1|Name=mRNA_P-canaliculata_contig994.24053.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=4398bp|location=Sequence derived from alignment at P-canaliculata_contig994:4492..15877+ (Pelvetia canaliculata dioecious)
ATGCGGCCGCAGCAACACCTCTGCATGCGGAGCTATCTACATAGAGTGCG
CATTGTCCTCCTCTTGGTTTACGCTGTCCTACATAGAGTGCTCAGCCACC
GCGGCGATGCGGCCGCAGCAACACCTCTGCATGCGGAGCTATCTACATAG
AGTGCGCATTGTCCTCCTCTTGGTTTACGCTGTCCTACATAGAGTGCTCA
GCCACCGCGGCGACGATGGCGGCGAAACGGTTCAGAACGGGTGGTCCGTG
GAATTCTTGCCGTCTCCGACGCGCGATCCCAAGGGCTGCGGACGACCGGG
GAAGTTCGTGGAGGGGTCTTTCGTGTGCGATCCCGACGGGCTTCTTACTC
TTTCGGGGGCAGAGAGACGATGGCGGCGAAACGGTTCAGAACGGGTGGTC
CGTGGAATTCTTGCCGTCTCCGACGCGCGATCCCAAGGGCTGCGGACGAC
CGGGGAAGTTCGTGGAGGGGTCTTTCGTGTGCGATCCCGACGGGCTTCTT
ACTCTTTCGGGGGCAGAGAGGATCGAGGAAAAACTGGAAGATATGTCCGG
CCTTCGGAGCCCGTGCGGAGACGGAGGAGATGTCCCGCAGGGGGTCGAGG
GAGGCGTGGCGGTAGTGTCACGGATACTTGCCTCTGGAGGCGATGGCGTG
AACAAGAAACCCCGCGGGGTTCTGAGCATGTTGGAGAGAACACGTTCGGA
GTTGGAGGGAGGCGGTGTTTCCGCGGACTGGTTTGCAAGAGGTGTGCACG
ATTCTTGGCGAATAGGGAAGCACGGATGCGACAATGGGTTTCTTCTCGTG
GCTTCCCAGGCGGACAGGACGTTCGCCATCTCTGTGGATCGAGGAAAAAC
TGGAAGATATGTCCGGCCTTCGGAGCCCGTGCGGAGACGGAGGAGATGTC
CCGCAGGGGGTCGAGGGAGGCGTGGCGGTAGTGTCACGGATACTTGCCTC
TGGAGGCGATGGCGTGAACAAGAAACCCCGCGGGGTTCTGAGCATGTTGG
AGAGAACACGTTCGGAGTTGGAGGGAGGCGGTGTTTCCGCGGACTGGTTT
GCAAGAGGTGTGCACGATTCTTGGCGAATAGGGAAGCACGGATGCGACAA
TGGGTTTCTTCTCGTGGCTTCCCAGGCGGACAGGACGTTCGCCATCTCTG
TGGGTAAAGGACTCGAGCAGTTCCTCACTTCCAAGGATCGGAATGCAGCG
CTCAACGCCATGAAGCCCCTCCTGCGAGAAGGAGACTGGGATGCCGCCAT
CCTGAAGGCACTGGAAGAGATAAACGGGCGTCTCCGGAGATCACTCCCCG
GTGAAGCCGATGAGGATGACGGCGAAGGTTCCCACGCCAAGATGTACACG
TCGCCGCTCAGCGGCAAGTGGAGCGCAAATATGCCACGTGCGGAGAAAAG
CAAGCGTGACGGGTATAGTGGCGACGGAGATGGAGATGGAGGCGGCGGCG
GGGGGGGTGGAGGTGGAGGTGGCTTGTTTGGAGGTTGGAACGTAGGGGGA
TTCTTTGAAAGCGCCTGGTCGGAGGTCACTCCAGTCTCCACGCTGCTGGC
TTTGACGTTGCTGTGGGGCGGAGCGAAAGCCCGGAGTTTCGCACAGAGAA
GACATTTCGAGGCCAAATTGAGGGGGATCGAAGTCGAGAGGGTAAAGGAC
TCGAGCAGTTCCTCACTTCCAAGGATCGGAATGCAGCGCTCAACGCCATG
AAGCCCCTCCTGCGAGAAGGAGACTGGGATGCCGCCATCCTGAAGGCACT
GGAAGAGATAAACGGGCGTCTCCGGAGATCACTCCCCGGTGAAGCCGATG
AGGATGACGGCGAAGGTTCCCACGCCAAGATGTACACGTCGCCGCTCAGC
GGCAAGTGGAGCGCAAATATGCCACGTGCGGAGAAAAGCAAGCGTGACGG
GTATAGTGGCGACGGAGATGGAGATGGAGGCGGCGGCGGGGGGGGTGGAG
GTGGAGGTGGCTTGTTTGGAGGTTGGAACGTAGGGGGATTCTTTGAAAGC
GCCTGGTCGGAGGTCACTCCAGTCTCCACGCTGCTGGCTTTGACGTTGCT
GTGGGGCGGAGCGAAAGCCCGGAGTTTCGCACAGAGAAGACATTTCGAGG
CCAAATTGAGGGGGATCGAAGTCGAGAGACCTATCGTGCGATTTAACGCC
GGGGGATGGTCCGTCAAACAAGAGGCACTAGGCTCTGCTGGGACGTGTCC
AATCTGCCTCGACACCTTCGCGGTGCCATCTTCGGAGGTACAAACGCCAT
GCAACACCGTCGGGGCCTGCACTGTCGGCGAGGGATTAATAGACGCAGAC
GGAGTAGTGGTTGCTACCCTGCCTTGCGGTCATTCTTTTTGCCGAAGACC
TATCGTGCGATTTAACGCCGGGGGATGGTCCGTCAAACAAGAGGCACTAG
GCTCTGCTGGGACGTGTCCAATCTGCCTCGACACCTTCGCGGTGCCATCT
TCGGAGGTACAAACGCCATGCAACACCGTCGGGGCCTGCACTGTCGGCGA
GGGATTAATAGACGCAGACGGAGTAGTGGTTGCTACCCTGCCTTGCGGTC
ATTCTTTTTGCCGAAGCTGCCTCGAACGATGGCACAAAATTGGCTCTGGC
GCGAAAGGCCCTTGCCAGAGCACAACGTCCCACGTAAACAGCCCGTGTCC
CATATGCCACGAGGCGACACCTGCTCTTGGCGATCCGAGACTCGCTTGCA
CCCGGCGTACGTCCCGCCGCTCGCTTCGACCCCGCGGCGAGGCCGGGTCG
GTCAAATTCAGCTGGGAAGGCGACTCTTCCGTGGCTAGAGGTCGCCCGTC
GTCGGACCTGGGCTCTAGCGGGCGCATGGGCTTAAGGTTCATGTGGACGG
GATCAAATCGTGGGGGTCGAGAGGTGACCGGCCGAAATGTGTCCCCACCA
CCGCCCCCGCCGCCGCCTCCGAAATCGAGGTCCATAGGTGGATCTCCTGA
CGGCGTTCCGTTGACGCCAGTGAAAGTGGCGCCGCGAGGAATGAGAACGG
ACAAGGGGGGTAGAGTGAGGGAGCGGATGGCTCCGACCATGATACCAGGG
TATCTGCGTCAAACCGACGAAAGCAGCTCGAGGCAGCGGGTGAACAGAGA
AGTTGCATTCCGACTGGCTTCACTGGGGTCTCAGTATCCCGCGTTCGTTG
ACGATCGGATCGTCAACAGATGGCTTTCAAATGATAAGTCTTCCAGCTGG
AGCCGGGACCCATTGCTCGTGAGGAATCATCGACAGGGTATATTCGGTCG
CATGCGGATTCCGAAGGCCCACTTTTCCAGCTGGAGCGGGGACCCATTTC
TCCCTACGAATTATCGATCGGATATAAACGGCGGCATGGGCGGTCATCCC
GGGAGCTGGGAAAAGGGTAGTGGCTGGGTTTCCAATCGCTCGCGTGGCGA
CTGTAACGGTGGCGCATTCAGCGAAGAACATAAACACTACAGCGGCGGCT
CCTCCGCTTCGGCTACCAGCGGTGAATGGTAGCTGCCTCGAACGATGGCA
CAAAATTGGCTCTGGCGCGAAAGGCCCTTGCCAGAGCACAACGTCCCACG
TAAACAGCCCGTGTCCCATATGCCACGAGGCGACACCTGCTCTTGGCGAT
CCGAGACTCGCTTGCACCCGGCGTACGTCCCGCCGCTCGCTTCGACCCCG
CGGCGAGGCCGGGTCGGTCAAATTCAGCTGGGAAGGCGACTCTTCCGTGG
CTAGAGGTCGCCCGTCGTCGGACCTGGGCTCTAGCGGGCGCATGGGCTTA
AGGTTCATGTGGACGGGATCAAATCGTGGGGGTCGAGAGGTGACCGGCCG
AAATGTGTCCCCACCACCGCCCCCGCCGCCGCCTCCGAAATCGAGGTCCA
TAGGTGGATCTCCTGACGGCGTTCCGTTGACGCCAGTGAAAGTGGCGCCG
CGAGGAATGAGAACGGACAAGGGGGGTAGAGTGAGGGAGCGGATGGCTCC
GACCATGATACCAGGGTATCTGCGTCAAACCGACGAAAGCAGCTCGAGGC
AGCGGGTGAACAGAGAAGTTGCATTCCGACTGGCTTCACTGGGGTCTCAG
TATCCCGCGTTCGTTGACGATCGGATCGTCAACAGATGGCTTTCAAATGA
TAAGTCTTCCAGCTGGAGCCGGGACCCATTGCTCGTGAGGAATCATCGAC
AGGGTATATTCGGTCGCATGCGGATTCCGAAGGCCCACTTTTCCAGCTGG
AGCGGGGACCCATTTCTCCCTACGAATTATCGATCGGATATAAACGGCGG
CATGGGCGGTCATCCCGGGAGCTGGGAAAAGGGTAGTGGCTGGGTTTCCA
ATCGCTCGCGTGGCGACTGTAACGGTGGCGCATTCAGCGAAGAACATAAA
CACTACAGCGGCGGCTCCTCCGCTTCGGCTACCAGCGGTGAATGGTAG