prot_P-canaliculata_contig99181.24033.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99181.24033.1
Unique Nameprot_P-canaliculata_contig99181.24033.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length68
Homology
BLAST of mRNA_P-canaliculata_contig99181.24033.1 vs. uniprot
Match: D7FK06_ECTSI (CRAL/TRIO domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.010e-17
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    7 WRESYGIDTILDEDLSDFDLSKVFFWCGFDRGGRPCLVYRVCEHIKPDSKKERPTAENKV 66
            WR +Y +DTILDEDLS   +S  F+W GFDR GRPCLV+R CEH K DS    PT E KV
Sbjct:   79 WRTTYKLDTILDEDLSGTGVSHEFYWSGFDRDGRPCLVFRACEHRKSDSDGGSPTVEEKV 138          
BLAST of mRNA_P-canaliculata_contig99181.24033.1 vs. uniprot
Match: A0A6H5KAS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.510e-17
Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    7 WRESYGIDTILDEDLSDFDLSKVFFWCGFDRGGRPCLVYRVCEHIKPDSKKERPTAENKV 66
            WR +Y +DTILDEDLS   +S  F+W GFDR GRPCLV+R CEH K DS    PT E K+
Sbjct:   79 WRITYKLDTILDEDLSGTGVSHEFYWSGFDRDGRPCLVFRACEHRKSDSDGASPTVEEKL 138          
BLAST of mRNA_P-canaliculata_contig99181.24033.1 vs. uniprot
Match: A0A7S2GJ01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJ01_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.810e-7
Identity = 19/44 (43.18%), Postives = 27/44 (61.36%), Query Frame = 0
Query:    7 WRESYGIDTILDEDLSDFDLSKVFFWCGFDRGGRPCLVYRVCEH 50
            WR+++G++ +L ED SD DL +  +W GFD  G P LV     H
Sbjct:   60 WRDTFGLEQLLQEDFSDMDLRREVYWEGFDLAGHPVLVINAARH 103          
BLAST of mRNA_P-canaliculata_contig99181.24033.1 vs. uniprot
Match: A0A7S4P273_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P273_GUITH)

HSP 1 Score: 48.1 bits (113), Expect = 9.740e-5
Identity = 20/58 (34.48%), Postives = 31/58 (53.45%), Query Frame = 0
Query:    7 WRESYGIDTILDEDLSDFDLSKVFFWCGFDRGGRPCLVYRVCEH------IKPDSKKE 58
            WR+ Y +DTI++ED S++D     + CG D+ GRP   +    H      + P+S  E
Sbjct:  130 WRQEYKVDTIMEEDWSEYDKRGEMYPCGLDKDGRPTWTWHTQRHGRTINSVPPNSSPE 187          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99181.24033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FK06_ECTSI1.010e-1761.67CRAL/TRIO domain containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAS6_9PHAE3.510e-1760.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2GJ01_9STRA2.810e-743.18Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4P273_GUITH9.740e-534.48Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99181contigP-canaliculata_contig99181:152..355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99181.24033.1mRNA_P-canaliculata_contig99181.24033.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99181 152..355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99181.24033.1 ID=prot_P-canaliculata_contig99181.24033.1|Name=mRNA_P-canaliculata_contig99181.24033.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=68bp
LGRQKIWRESYGIDTILDEDLSDFDLSKVFFWCGFDRGGRPCLVYRVCEH
IKPDSKKERPTAENKVG*
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