prot_P-canaliculata_contig98984.24014.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98984.24014.1
Unique Nameprot_P-canaliculata_contig98984.24014.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length54
Homology
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: A0A5B2TW97_9FLAO (Phage tail tape measure protein n=1 Tax=Maribacter flavus TaxID=1658664 RepID=A0A5B2TW97_9FLAO)

HSP 1 Score: 82.4 bits (202), Expect = 4.860e-17
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAKLIASG 53
            MAKRIVDEEMRF+I+VNGD+AQKELYDLEKSTR+LT RNKELR E+ +L A G
Sbjct:    1 MAKRIVDEEMRFSIIVNGDRAQKELYDLEKSTRDLTQRNKELRQEKVRLFAQG 53          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: UPI001AAFD4D9 (phage tail tape measure protein n=1 Tax=Salegentibacter sp. BDJ18 TaxID=2816376 RepID=UPI001AAFD4D9)

HSP 1 Score: 76.6 bits (187), Expect = 5.230e-15
Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAKLIASG 53
            MAKRIVDEEMRF++V+NG++AQKEL+DLEKSTR+LT RNKELR E+ KL  +G
Sbjct:    1 MAKRIVDEEMRFSVVINGNEAQKELFDLEKSTRDLTKRNKELREEKRKLSRAG 53          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: A0A385BJ74_9FLAO (Phage-related minor tail protein n=1 Tax=Mariniflexile sp. TRM1-10 TaxID=2027857 RepID=A0A385BJ74_9FLAO)

HSP 1 Score: 65.9 bits (159), Expect = 3.280e-11
Identity = 32/48 (66.67%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAK 48
            M K+I+DEEMRF+I+VNG++AQKEL++LE +TR+LT  NKEL+AEQA+
Sbjct:    1 MGKKILDEEMRFSIIVNGNQAQKELFELENATRKLTATNKELKAEQAR 48          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: A0A2E6VDZ6_9FLAO (Phage tail tape measure protein n=1 Tax=Winogradskyella sp. TaxID=1883156 RepID=A0A2E6VDZ6_9FLAO)

HSP 1 Score: 65.5 bits (158), Expect = 4.480e-11
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELR 43
            MAKRIVDEEMRFT++VNG+ AQKELYDLEK  R LT  NK+LR
Sbjct:    1 MAKRIVDEEMRFTVIVNGNSAQKELYDLEKRNRALTASNKDLR 43          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: UPI00047E2194 (phage tail tape measure protein n=2 Tax=Maribacter sp. Hel_I_7 TaxID=1249997 RepID=UPI00047E2194)

HSP 1 Score: 64.7 bits (156), Expect = 8.370e-11
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTR 33
            MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTR
Sbjct:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTR 33          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: A0A4Q0PNC7_9FLAO (Tubulin-specific chaperone A n=1 Tax=Leeuwenhoekiella marinoflava TaxID=988 RepID=A0A4Q0PNC7_9FLAO)

HSP 1 Score: 62.4 bits (150), Expect = 5.460e-10
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAKLIASG 53
            MAKRIVDEEMRF+I++NG++AQKEL DLEK+ R+L   N++ R EQ KL   G
Sbjct:    1 MAKRIVDEEMRFSIIINGNEAQKELLDLEKANRKLLTANQKNRTEQRKLERQG 53          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: UPI0007FE11C6 (phage tail tape measure protein n=1 Tax=Tamlana sp. s12 TaxID=1630406 RepID=UPI0007FE11C6)

HSP 1 Score: 62.0 bits (149), Expect = 7.470e-10
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAKL 49
            M+K I+DE M+ +IVVNG++AQKEL++LEKSTR LT +NK+ R EQAKL
Sbjct:    1 MSKTILDEVMKLSIVVNGNEAQKELFELEKSTRNLTAQNKQYREEQAKL 49          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: UPI00047B9900 (phage tail tape measure protein n=1 Tax=Sediminibacter sp. Hel_I_10 TaxID=1392490 RepID=UPI00047B9900)

HSP 1 Score: 58.9 bits (141), Expect = 9.120e-9
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRN 39
            MAKR+VDEEMRFT+V+NGD  +KELYDLEK  R LT  N
Sbjct:    1 MAKRVVDEEMRFTVVINGDAGKKELYDLEKRNRSLTASN 39          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: A0A1I7GLC2_9FLAO (Phage tail tape measure protein, TP901 family, core region n=1 Tax=Pustulibacterium marinum TaxID=1224947 RepID=A0A1I7GLC2_9FLAO)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAKLIASG 53
            MAK I DEE++ +I++NGD AQK+L+DL+KSTR L   NK+LR E+  L   G
Sbjct:    1 MAKTITDEEIKLSIIINGDPAQKQLHDLDKSTRTLISDNKKLRDERRALEREG 53          
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Match: UPI001C5AF476 (phage tail tape measure protein n=1 Tax=Flavobacterium sp. NKUCC04_CG TaxID=2842121 RepID=UPI001C5AF476)

HSP 1 Score: 54.3 bits (129), Expect = 3.910e-7
Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAKLIASG 53
            MAKRIVDEE++ +I+++G+ AQKEL +LEKSTR L   NKEL  ++  L   G
Sbjct:    1 MAKRIVDEELKLSIIIDGNAAQKELLNLEKSTRSLNTENKELLTQKRLLEKQG 53          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98984.24014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A5B2TW97_9FLAO4.860e-1779.25Phage tail tape measure protein n=1 Tax=Maribacter... [more]
UPI001AAFD4D95.230e-1573.58phage tail tape measure protein n=1 Tax=Salegentib... [more]
A0A385BJ74_9FLAO3.280e-1166.67Phage-related minor tail protein n=1 Tax=Marinifle... [more]
A0A2E6VDZ6_9FLAO4.480e-1176.74Phage tail tape measure protein n=1 Tax=Winogradsk... [more]
UPI00047E21948.370e-11100.00phage tail tape measure protein n=2 Tax=Maribacter... [more]
A0A4Q0PNC7_9FLAO5.460e-1062.26Tubulin-specific chaperone A n=1 Tax=Leeuwenhoekie... [more]
UPI0007FE11C67.470e-1065.31phage tail tape measure protein n=1 Tax=Tamlana sp... [more]
UPI00047B99009.120e-971.79phage tail tape measure protein n=1 Tax=Sediminiba... [more]
A0A1I7GLC2_9FLAO1.120e-754.72Phage tail tape measure protein, TP901 family, cor... [more]
UPI001C5AF4763.910e-754.72phage tail tape measure protein n=1 Tax=Flavobacte... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98984contigP-canaliculata_contig98984:3..164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98984.24014.1mRNA_P-canaliculata_contig98984.24014.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98984 3..164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98984.24014.1 ID=prot_P-canaliculata_contig98984.24014.1|Name=mRNA_P-canaliculata_contig98984.24014.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=54bp
MAKRIVDEEMRFTIVVNGDKAQKELYDLEKSTRELTGRNKELRAEQAKLI
ASGQ
back to top