prot_P-canaliculata_contig9895.24010.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9895.24010.1
Unique Nameprot_P-canaliculata_contig9895.24010.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length864
Homology
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BLAST of mRNA_P-canaliculata_contig9895.24010.1 vs. uniprot
Match: D8LAZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ1_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 9.890e-117
Identity = 276/645 (42.79%), Postives = 350/645 (54.26%), Query Frame = 0 
Query:  264 TLEGPIELSPGDNEVAFTLRPERPGIITAAGISATWAGVNLAEILFSGASRGAAAGGNATLMP--------PPCSVVVRPFRPQAELEVLPPSFLPFGKEGWVRVRVNTGPDALKDARLRVTAGRGLAWGDVGGARVSRRRFGVGVDGGGGDXXXXXXX------ESGSGVSAPTEETQPVRAWLGEEDPAEVVVDLEELKGPDQTVEISLRLQSTGEASRRGS----PSIPPRSCTIKAELHAWHTRGSVAERAVDVPAAVGGRGAGSPPATGQEPVARPSTAAEYPPRESEALGVECWTRARASVAARLPFEAKVTVVPRPEGFVLVQAALVCSAPVALTLRSCDAVQLEEGSVLAADPNAFLHGELLPPGQPMILAACVQRGAVEA-------------SINHGRDAQS-------LATFRLRYAVEDASSRGRIGMKGSSAGKEHEIFEFDVCIPSPGGDNRPGGAY------NGGVPGSVILGLGLTTFARPHSEGNDASGWEGSVDIIRLALAEPRAFDFGVEGRGIDGGGRXXXXSEAATAATQHVAYEISASPSDWMISGLVKGSTQLNMKDGQ-QIISRVHLVPIRSGLLSLPKLEVTAPIGDWQEVQSVVWAPEERKVLVLPPVETASVCKAQAP 863
            T   P+EL PGDNEV FTLRP   G+ITA+ +SA W GV L ++L SG  RG   G +   +P        PP S VVRPFRPQA L+V+PPSFLP G E W++V V  GPD L+ +RLRVT GRGLAWGD   +RV  RR    + GGGG XXXXXXX      E       P E   P  +  GEE   +++V LEE+  P    E+SLR++ST EAS        P++ PRS  ++AEL AWH+R   A  A D                                      GVEC T ARA++  RLPFEA+V V  R  G V  Q ALVC+APVAL+LRSC+  +LE G+ + +DPN FL+GE LPPGQP+ LAAC++R +                S   G + +        LA  RLRY++      G +  +   +G+  EIF FDVCIPSP                + G  GS      LTT  RP  +G    G  G   + RL LAEPRAF+FGV      GGG       A    T    Y++ ASPSDWM+ GL++GS +L+ K G  Q++ RVHLVPIR GL+ LP+L+V    G     +  VW P+ RKVLVLPP ++ASVC+A+AP
Sbjct: 1269 TSSRPVELLPGDNEVVFTLRPTVAGVITASRVSAAWGGVTLVQVL-SGGGRGR--GPSGVTLPSAWLGAPRPPPSAVVRPFRPQAVLKVVPPSFLPLGNEVWLKVAVTAGPDTLRGSRLRVTMGRGLAWGDAEASRVRWRR----LSGGGGXXXXXXXXXXXXXSEGADDGCGPAEAEGPALSRPGEE-ATDMLVALEEVLRPGYVAEVSLRVRSTAEASPPAGGGPGPAVAPRSHVVRAELEAWHSRSPDAAAADDA-------------------------------------GVECRTYARAAIVPRLPFEARVAVTARQAGVVFAQTALVCTAPVALSLRSCELSRLEPGAEVLSDPNGFLNGESLPPGQPLRLAACLRRPSAATXXXXXXXXXXXXXSRGGGEERKGSVGGGVPLAVHRLRYSI------GTVAGESGDSGQAEEIFVFDVCIPSPADGXXXXXXXXXXXXXSPGAAGSGRAQRCLTTAVRPCDDGGAEDGKGG---VTRLKLAEPRAFEFGVVDSEASGGGEDGTGGTAPPTVT----YQVVASPSDWMVGGLIRGSAKLDKKGGGLQVLCRVHLVPIRGGLVELPRLDVVVERGRAAPGEVEVWNPDLRKVLVLPPGDSASVCQARAP 1855
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9895.24010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAZ1_ECTSI9.890e-11742.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022233TRAPP II complex, TRAPPC10PFAMPF12584TRAPPC10coord: 765..827
e-value: 1.9E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR13251EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1coord: 766..840
coord: 156..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9895contigP-canaliculata_contig9895:4075..7549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9895.24010.1mRNA_P-canaliculata_contig9895.24010.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9895 3799..8664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9895.24010.1 ID=prot_P-canaliculata_contig9895.24010.1|Name=mRNA_P-canaliculata_contig9895.24010.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=864bp
MFAEGSGSGSSGGGGGSSGVGWSGMNSGGAGAAGGTRAGTTDKGSIHRQA
AWRQKPLRRLESVATLAGGDSDPSPSGSPSTNDGGGSRLPLPPPPPPAPS
AITSADALSGARSQAPKAGVADVTGYNEAADSSSSAGTGASAAKGGVSKS
AVFQVPTIRTTRSQSLSPRKSALSASSAPVVSNLNADKPPRASSTTLSTA
KTSSSRPGGSRSLARRSTGSSKVSPAGSPSRLPLDAGAALAAPAVGSRLP
VPGGGRSRPTCSMTLEGPIELSPGDNEVAFTLRPERPGIITAAGISATWA
GVNLAEILFSGASRGAAAGGNATLMPPPCSVVVRPFRPQAELEVLPPSFL
PFGKEGWVRVRVNTGPDALKDARLRVTAGRGLAWGDVGGARVSRRRFGVG
VDGGGGDGGGDGGEESGSGVSAPTEETQPVRAWLGEEDPAEVVVDLEELK
GPDQTVEISLRLQSTGEASRRGSPSIPPRSCTIKAELHAWHTRGSVAERA
VDVPAAVGGRGAGSPPATGQEPVARPSTAAEYPPRESEALGVECWTRARA
SVAARLPFEAKVTVVPRPEGFVLVQAALVCSAPVALTLRSCDAVQLEEGS
VLAADPNAFLHGELLPPGQPMILAACVQRGAVEASINHGRDAQSLATFRL
RYAVEDASSRGRIGMKGSSAGKEHEIFEFDVCIPSPGGDNRPGGAYNGGV
PGSVILGLGLTTFARPHSEGNDASGWEGSVDIIRLALAEPRAFDFGVEGR
GIDGGGRGGGGSEAATAATQHVAYEISASPSDWMISGLVKGSTQLNMKDG
QQIISRVHLVPIRSGLLSLPKLEVTAPIGDWQEVQSVVWAPEERKVLVLP
PVETASVCKAQAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022233TRAPP_II_complex_TRAPPC10