prot_P-canaliculata_contig98893.24005.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98893.24005.1
Unique Nameprot_P-canaliculata_contig98893.24005.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length198
Homology
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: UPI0016756F07 (EamA family transporter n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016756F07)

HSP 1 Score: 270 bits (689), Expect = 4.720e-88
Identity = 144/197 (73.10%), Postives = 165/197 (83.76%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAKGKGDLLVKVTEVS 197
            L+LGERIG WR  G+ALAF+GVVLIGLGAPPEAA  GF LGI  +AC AM+EA+GAI VKSVK+++PVQLL WFGI+GS VLWPL+L LE  Q  AF P+TRVNFGLAL+YSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGV  GV+ILGE LTPI+++GAL+TI GI +IL RN+ + K     KVTE S
Sbjct:  107 LVLGERIGIWRTSGAALAFLGVVLIGLGAPPEAASEGFVLGIALIACGAMAEAVGAISVKSVKSISPVQLLVWFGIVGSIVLWPLSLFLEDGQTRAFNPETRVNFGLALIYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVIGGVVILGEKLTPIILLGALVTISGICVILWRNREEAKR----KVTESS 299          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: A0A8J3G299_9PROT (Uncharacterized protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G299_9PROT)

HSP 1 Score: 206 bits (524), Expect = 4.900e-63
Identity = 110/184 (59.78%), Postives = 137/184 (74.46%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAK 184
            +ILGERI  W  +G +LAFVG V+IGL  P EAAG  FA+GI  MACAA+SEA GAI VK  + + P QL+AWF ++G+ VLWPLT+++ET Q + FAPD R  F  A++YSVLLVS+VAHGSYYWLL RLPI  V PSGL+TTVIGVA G+LIL E L+  L VG  IT+ G+AI++ R   +
Sbjct:  107 IILGERIKGWSWLGISLAFVGAVIIGLAGPGEAAGPLFAVGIVMMACAALSEACGAIAVKLTRNIKPAQLVAWFAVVGTIVLWPLTVLIETDQTAVFAPDIRWKFAAAVLYSVLLVSIVAHGSYYWLLSRLPIQVVTPSGLLTTVIGVAGGLLILKEPLSIGLTVGIAITLTGVAIVIWRGNRR 290          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: UPI0003FFA11D (EamA family transporter n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003FFA11D)

HSP 1 Score: 196 bits (497), Expect = 4.730e-59
Identity = 107/189 (56.61%), Postives = 137/189 (72.49%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAKGKGDL 189
            ++  ++IG +++ G  LAF+GV++I    P E AG  F LGI  M  AAM EA+GA+ VK VK+V P+QLLAWF +IGSAVLWPL+L++E  Q  AFAP+ R  F +AL YS LLVS+VAHGSYYWLLQRLPI+ V+ +GLMTTVI V A  ++LGE LTP L++G LIT+ GIA+IL R     K  L
Sbjct:  106 IVFKDKIGVYKLAGILLAFIGVIIIASAKPDETAGPYFLLGILLMVGAAMCEAVGAVLVKFVKSVGPLQLLAWFALIGSAVLWPLSLLVEDNQWEAFAPENRKTFIMALAYSALLVSVVAHGSYYWLLQRLPIYIVSSTGLMTTVIAVIASAVLLGEELTPNLLLGGLITLGGIALILARKNRAAKAAL 294          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: UPI00035E36C9 (DMT family transporter n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI00035E36C9)

HSP 1 Score: 195 bits (495), Expect = 1.090e-58
Identity = 102/185 (55.14%), Postives = 131/185 (70.81%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAKG 185
            + LGE +G  RI G  +AFVG V+I    P EAAG  F  GIG M C A SEA+GA  VK VK V P++LLAW  ++G  VLWPLTL +E+ Q+ A +PD R+NFG+AL+YS LLVSLVAHGSYYWLLQRLP+  VA +GLMTT+I VAA  +IL E ++   ++G ++ + G+ +IL R K KG
Sbjct:  106 MFLGETVGAKRISGIVVAFVGAVIIATAKPDEAAGPYFLFGIGLMVCGAFSEAMGAFFVKKVKGVKPMELLAWCAVMGVVVLWPLTLAIESNQIDAISPDNRLNFGMALLYSSLLVSLVAHGSYYWLLQRLPLSIVAGTGLMTTLIAVAASTIILRETMSVPFIIGGVMILFGVTLILLRTKRKG 290          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: UPI0004E19931 (DMT family transporter n=1 Tax=Parvularcula oceani TaxID=1247963 RepID=UPI0004E19931)

HSP 1 Score: 147 bits (370), Expect = 6.660e-40
Identity = 90/191 (47.12%), Postives = 119/191 (62.30%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGL--ALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAKGKGDL 189
            L LGER+G  RI G A+A  GV LI  G+  E       LG   +  AA SEA GAI VK ++ V P++LL+WFG++G  V   L+LI ET Q +AF P+  VN+G+  AL YSV + S+ AH SYY+L+QR P+  VA SGLM +V  V  GVL+LGE LT   + G  +T+ G+A IL R +   + DL
Sbjct:  105 LFLGERVGWRRITGMAVALAGVALIATGSSEETGSRNLPLGALCILLAATSEAAGAIFVKKIEGVKPLELLSWFGVVGFFVTGILSLIFETGQRAAFVPE--VNWGVVGALAYSVFVASIFAHASYYFLIQRAPVSQVASSGLMASVFAVGFGVLLLGETLTVRFLFGGAMTLAGVAFILMRQERTKRADL 293          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: A0A371REJ8_9PROT (Uncharacterized protein n=1 Tax=Parvularcula marina TaxID=2292771 RepID=A0A371REJ8_9PROT)

HSP 1 Score: 143 bits (360), Expect = 4.190e-38
Identity = 84/187 (44.92%), Postives = 118/187 (63.10%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLI------GLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRN 181
            + L ER+G  RI+G+ LA VG+++I      GLG  P+   +   LG   + C A+SEA GAI VK + A+ P+Q+LAWFG +G+   W  TL+ E  Q    +   R N  LA++YS ++ S+  H SYYWLLQR+ +  +AP+GLMTTV  VA GV +LGE  T  L  GAL+T+ G+AII+ R+
Sbjct:  105 IFLHERVGWRRIVGATLAIVGILIIISGGDAGLG--PD---DRLFLGGLLVMCGALSEAAGAILVKKIDAIAPLQMLAWFGAVGAVSCWVFTLLFEQNQFDFLSEAGRTNVFLAVLYSAVIASIFGHSSYYWLLQRVDVSQIAPAGLMTTVFAVAGGVFLLGETFTLRLAAGALVTMTGVAIIVVRS 286          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: A0A850SC11_9PROT (DMT family transporter n=1 Tax=Parvularculaceae bacterium TaxID=2510335 RepID=A0A850SC11_9PROT)

HSP 1 Score: 140 bits (354), Expect = 1.760e-37
Identity = 82/186 (44.09%), Postives = 116/186 (62.37%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFA-PDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAKG 185
            + L ER+G  R +G ALAFVGV ++ L     A      LG+  +A  A++E+ GAI VK +    P +LLAWF ++G+  LWP TL LE   + A A  D  V FG A+ YS +  S+  H +YYWLLQRLP+  VAPS L+TT++G+A  ++ LGE LT   ++GAL  + G+A++L R+  KG
Sbjct:  105 VFLNERVGWRRTLGIALAFVGVAIVALTRDQSAEAR-IGLGVMLVAGCALTESFGAILVKRISGFRPHELLAWFALVGAVFLWPATLALEPEALEALARADKAVAFG-AVAYSAIAASIFGHTAYYWLLQRLPVSVVAPSTLLTTLLGIAFSMVFLGERLTTPFLIGALTALAGVAVVLFRSAQKG 288          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: E0TGQ5_PARBH (Integral membrane protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) TaxID=314260 RepID=E0TGQ5_PARBH)

HSP 1 Score: 134 bits (338), Expect = 5.110e-35
Identity = 84/195 (43.08%), Postives = 117/195 (60.00%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAG-NGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVN-FGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAKGKGDLLVKV 193
            L+LGER+G  R  G+ALA +G V+I  G     +G     LG   +   A  EA+GAI +K V  V+ +QLLAWFG++G  V W LT++L   Q+    P+     F  AL+YS +  S++ H SYYWLLQR+ +  +APSG++TTVI V AG L L E LT  L+VG  +T+LG+ II  R+  K   +  + V
Sbjct:  105 LLLGERVGWRRGTGAALAVLGAVIIVTGEGEAMSGATNLPLGAVLLIAGAFCEALGAILIKRVHGVSALQLLAWFGVVGGVVSWGLTIVLIGDQVPDAIPNLATGGFVSALIYSAIGASIMGHASYYWLLQRVDVTVLAPSGVLTTVIAVTAGTLFLDEPLTARLIVGGALTLLGVGIIAIRSAKKATTEASLPV 299          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: A0A8J2Y6U9_9PROT (Membrane protein n=2 Tax=Aquisalinus TaxID=1795639 RepID=A0A8J2Y6U9_9PROT)

HSP 1 Score: 132 bits (332), Expect = 2.770e-34
Identity = 83/184 (45.11%), Postives = 110/184 (59.78%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKAK 184
            + L ERIG  RI G  +A  GV LI L    E  G+   LG+  +  A  SEA GAI VK ++ V P++LL WF I GSA LW  TL LE  Q++    +    F  AL ++V   S+  H +YYWL+QRLP++ V+ S L+ TVI VA GV ILGE +T   +VG L+T+ G+ +IL R K K
Sbjct:  106 VFLKERIGLPRIAGIVIAIAGVGLIALS--QERDGDTSMLGVALLVAAMASEATGAIIVKKIEGVKPLELLGWFAIFGSAFLWTATLTLERDQIAVLTGENIWPFLAALSFTVFGASIFGHTTYYWLIQRLPVNQVSSSTLLATVIAVAGGVFILGEPVTWQFIVGGLMTLGGVGVILIRTKDK 287          
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Match: A0A357LGF5_9PROT (Uncharacterized protein n=3 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A357LGF5_9PROT)

HSP 1 Score: 131 bits (330), Expect = 1.440e-33
Identity = 79/186 (42.47%), Postives = 109/186 (58.60%), Query Frame = 0
Query:    1 LILGERIGPWRIMGSALAFVGVVLIGLG---APPEAAGNGFALGIGFMACAAMSEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPDTRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAAGVLILGEVLTPILVVGALITILGIAIILRRNKA 183
            + L ERIG  RI G  LAF GV +I      APPE       +GIG +A A + EA G+I VK      P +LLAWFG +G+ VLW +T  LE  Q  A A         A++YS LL S++ H +YYWLLQR P+  VA S L+TT + V+  +LILGE +   +V+G ++T+ G+ +++ R  A
Sbjct:  145 IFLKERIGWRRITGITLAFAGVAVIVSSRGQAPPEVR---LGIGIGLVALATLVEAAGSIFVKKASGFKPWELLAWFGAVGAPVLWGVTFALERNQFEALAASDTKLVVAAILYSALLASVLGHTTYYWLLQRRPVSEVASSSLLTTFLAVSFSILILGEPMNAAIVIGGVMTLFGVGVVVLRAPA 327          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98893.24005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0016756F074.720e-8873.10EamA family transporter n=1 Tax=Litorimonas cladop... [more]
A0A8J3G299_9PROT4.900e-6359.78Uncharacterized protein n=1 Tax=Algimonas arctica ... [more]
UPI0003FFA11D4.730e-5956.61EamA family transporter n=1 Tax=Hellea balneolensi... [more]
UPI00035E36C91.090e-5855.14DMT family transporter n=1 Tax=Robiginitomaculum a... [more]
UPI0004E199316.660e-4047.12DMT family transporter n=1 Tax=Parvularcula oceani... [more]
A0A371REJ8_9PROT4.190e-3844.92Uncharacterized protein n=1 Tax=Parvularcula marin... [more]
A0A850SC11_9PROT1.760e-3744.09DMT family transporter n=1 Tax=Parvularculaceae ba... [more]
E0TGQ5_PARBH5.110e-3543.08Integral membrane protein n=1 Tax=Parvularcula ber... [more]
A0A8J2Y6U9_9PROT2.770e-3445.11Membrane protein n=2 Tax=Aquisalinus TaxID=1795639... [more]
A0A357LGF5_9PROT1.440e-3342.47Uncharacterized protein n=3 Tax=Parvularcula sp. T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 40..178
e-value: 6.4E-14
score: 52.3
NoneNo IPR availablePANTHERPTHR32322:SF9AMINO-ACID METABOLITE EFFLUX PUMP-RELATEDcoord: 2..180
NoneNo IPR availablePANTHERPTHR32322FAMILY NOT NAMEDcoord: 2..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..197
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 156..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 161..178
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..155
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.622
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 1..28
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 73..182
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 70..89
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 39..58
NoneNo IPR availableTMHMMTMhelixcoord: 159..178
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98893contigP-canaliculata_contig98893:462..1055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98893.24005.1mRNA_P-canaliculata_contig98893.24005.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98893 462..1055 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98893.24005.1 ID=prot_P-canaliculata_contig98893.24005.1|Name=mRNA_P-canaliculata_contig98893.24005.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=198bp
LILGERIGPWRIMGSALAFVGVVLIGLGAPPEAAGNGFALGIGFMACAAM
SEAIGAIGVKSVKAVNPVQLLAWFGIIGSAVLWPLTLILETRQMSAFAPD
TRVNFGLALMYSVLLVSLVAHGSYYWLLQRLPIHTVAPSGLMTTVIGVAA
GVLILGEVLTPILVVGALITILGIAIILRRNKAKGKGDLLVKVTEVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom