mRNA_P-canaliculata_contig9807.23904.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9807.23904.1
Unique NamemRNA_P-canaliculata_contig9807.23904.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: A0A2G5ES39_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5ES39_AQUCA)

HSP 1 Score: 476 bits (1224), Expect = 1.360e-165
Identity = 246/292 (84.25%), Postives = 258/292 (88.36%), Query Frame = -2
Query:  315 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRRSPL-CTWCFASAAACRSS*RP*RGKRLLWTWSRPTPSM 1187
            PDQQ LIFAGKQLE GRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM IFVKTLTGKTITL++E SDTID VK KIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITL+VE SDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNI++  L CTW       CRS  RP  G+  LW W   TPS+
Sbjct:   38 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESLPCTWFCVCVVVCRSLLRPSLGRPSLWRWRVLTPSI 329          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: F0YAA4_AURAN (Polyubiquitin n=9 Tax=Stramenopiles TaxID=33634 RepID=F0YAA4_AURAN)

HSP 1 Score: 473 bits (1216), Expect = 9.100e-165
Identity = 242/254 (95.28%), Postives = 246/254 (96.85%), Query Frame = -2
Query:  426 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRR 1187
            PDQQ LIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITLD+EPSDTID VKQKIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++
Sbjct:   38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: A0A836CJQ4_9STRA (Polyubiquitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ4_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 2.680e-164
Identity = 242/254 (95.28%), Postives = 246/254 (96.85%), Query Frame = -2
Query:  426 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRR 1187
            PDQQ LIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITLD+EPSDTID VKQKIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++
Sbjct:   68 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 321          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: A0A446YT69_TRITD (Uncharacterized protein n=4 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446YT69_TRITD)

HSP 1 Score: 472 bits (1214), Expect = 3.180e-163
Identity = 241/269 (89.59%), Postives = 249/269 (92.57%), Query Frame = -2
Query:  381 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRRSPLCTWCFASAAACR 1187
            PDQQ LIFAGKQLE GRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM IFVKTLTGKTITL++E SDTID VK KIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITL+VE SDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIRRSP  TWC  S  ACR
Sbjct:  115 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIRRSPPSTWCSGSVVACR 383          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: D7FWC9_ECTSI (Similar to ubiquitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWC9_ECTSI)

HSP 1 Score: 479 bits (1234), Expect = 5.580e-163
Identity = 245/254 (96.46%), Postives = 249/254 (98.03%), Query Frame = -2
Query:  426 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRR 1187
            PDQQ LIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITLD+EPSDTIDGVKQKIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++
Sbjct:  342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 595          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: D8LC68_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LC68_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 1.530e-162
Identity = 245/268 (91.42%), Postives = 249/268 (92.91%), Query Frame = -2
Query:  426 PDQQGLIFAGKQLEAGRTLSDYNIQK--------------ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRR 1187
            PDQQ LIFAGKQLE GRTLSDYNIQK              ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITLD+EPSDTIDGVKQKIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++
Sbjct:   99 PDQQRLIFAGKQLEDGRTLSDYNIQKXXXXXXXXXXXXXKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 366          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: K7ZUY1_9EUKA (Polyubiquitin n=1 Tax=uncultured eukaryote TaxID=100272 RepID=K7ZUY1_9EUKA)

HSP 1 Score: 466 bits (1198), Expect = 4.790e-162
Identity = 237/261 (90.80%), Postives = 245/261 (93.87%), Query Frame = -2
Query:  405 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRRSPLCTWC 1187
            PDQQ LIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITL++E SDTID VK KIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGM+IFVKTLTGKTITL+VE SDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++  LCTWC
Sbjct:   38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMRIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKRALCTWC 298          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: H3G9R0_PHYRM (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=H3G9R0_PHYRM)

HSP 1 Score: 468 bits (1204), Expect = 9.130e-162
Identity = 239/254 (94.09%), Postives = 246/254 (96.85%), Query Frame = -2
Query:  426 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRR 1187
            PDQQ LIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITLD+EPSD+ID VKQKIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++
Sbjct:   38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: B7FZS1_PHATC (Predicted protein n=16 Tax=Eukaryota TaxID=2759 RepID=B7FZS1_PHATC)

HSP 1 Score: 466 bits (1198), Expect = 7.440e-161
Identity = 239/254 (94.09%), Postives = 243/254 (95.67%), Query Frame = -2
Query:  426 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRR 1187
            PDQQ LIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITLD+EPSDTID VK KIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++
Sbjct:   38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291          
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Match: A0A817CFU6_9BILA (Hypothetical protein n=2 Tax=Bilateria TaxID=33213 RepID=A0A817CFU6_9BILA)

HSP 1 Score: 461 bits (1186), Expect = 2.770e-160
Identity = 236/254 (92.91%), Postives = 243/254 (95.67%), Query Frame = -2
Query:  426 PDQQGLIFAGKQLEAGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM*IFVKTLTGKTITLDMEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLPDYNIQKESTLHLALRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIRR 1187
            PDQQ LIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM IFVKTLTGKTITL++EPSDTID VK KIQDKEGIPPDQQRLIFAG+QLEDGRTL DYNIQKESTLHL LRLRGGMQIFVKTLTGKTITL+VEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI++
Sbjct:   38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9807.23904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G5ES39_AQUCA1.360e-16584.25Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]
F0YAA4_AURAN9.100e-16595.28Polyubiquitin n=9 Tax=Stramenopiles TaxID=33634 Re... [more]
A0A836CJQ4_9STRA2.680e-16495.28Polyubiquitin n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A446YT69_TRITD3.180e-16389.59Uncharacterized protein n=4 Tax=Triticum turgidum ... [more]
D7FWC9_ECTSI5.580e-16396.46Similar to ubiquitin n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LC68_ECTSI1.530e-16291.42Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
K7ZUY1_9EUKA4.790e-16290.80Polyubiquitin n=1 Tax=uncultured eukaryote TaxID=1... [more]
H3G9R0_PHYRM9.130e-16294.09Uncharacterized protein n=4 Tax=Oomycota TaxID=476... [more]
B7FZS1_PHATC7.440e-16194.09Predicted protein n=16 Tax=Eukaryota TaxID=2759 Re... [more]
A0A817CFU6_9BILA2.770e-16092.91Hypothetical protein n=2 Tax=Bilateria TaxID=33213... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9807contigP-canaliculata_contig9807:10489..11676 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score66.2
Seed ortholog evalue9.6e-09
Seed eggNOG ortholog3847.GLYMA07G32043.1
EggNOG OGs2EZGE@1,2T0T9@2759,3823I@33090,3GRIH@35493
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1188
Cds size297
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9807.23904.1prot_P-canaliculata_contig9807.23904.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9807 10769..11065 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817342.6796355-UTR-P-canaliculata_contig9807:10488..107681622817342.6796355-UTR-P-canaliculata_contig9807:10488..10768Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9807 10489..10768 +
1693495235.176991-UTR-P-canaliculata_contig9807:10488..107681693495235.176991-UTR-P-canaliculata_contig9807:10488..10768Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9807 10489..10768 +
1622817342.7026641-UTR-P-canaliculata_contig9807:11065..116761622817342.7026641-UTR-P-canaliculata_contig9807:11065..11676Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9807 11066..11676 +
1693495235.2003648-UTR-P-canaliculata_contig9807:11065..116761693495235.2003648-UTR-P-canaliculata_contig9807:11065..11676Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9807 11066..11676 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817342.6915853-CDS-P-canaliculata_contig9807:10768..110651622817342.6915853-CDS-P-canaliculata_contig9807:10768..11065Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9807 10769..11065 +
1693495235.190011-CDS-P-canaliculata_contig9807:10768..110651693495235.190011-CDS-P-canaliculata_contig9807:10768..11065Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9807 10769..11065 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9807.23904.1

>prot_P-canaliculata_contig9807.23904.1 ID=prot_P-canaliculata_contig9807.23904.1|Name=mRNA_P-canaliculata_contig9807.23904.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=99bp
MPSLSWIFCFTPSMVSDGSTSKVIVFPVKVVTKICMPPRRRSTRCRVDSS
GCCSPTGCGRPPAACPRRSGAAGPAECPPCPGSSVSHHRWCPTVPRPE*
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mRNA from alignment at P-canaliculata_contig9807:10489..11676+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9807.23904.1 ID=mRNA_P-canaliculata_contig9807.23904.1|Name=mRNA_P-canaliculata_contig9807.23904.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1188bp|location=Sequence derived from alignment at P-canaliculata_contig9807:10489..11676+ (Pelvetia canaliculata dioecious)
CTCTTGATTTCCATTTGACTTTCGTTCGACAATAAAGTGCGCTTACTCAA CGAACCGAGTGTGCCAAGCCGCCCCAGGTATACTATTTCTACATTTTTCA ACAGGATAATGATTACTTTCGTCCGACAATAAATTGCGATTGTCCATCAA ACCGAGTGTCCCAAACCGCCCCAAGTTCCGTTTACTTTATATTTTTCTAC AGGGTAATGGCTTAACCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCC GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGAT CTTCTGTTTCACGCCATCGATGGTGTCGGACGGCTCCACGTCCAAAGTAA TCGTTTTCCCCGTCAAGGTCGTCACGAAGATCTGCATGCCGCCGCGGAGG CGAAGCACCAGGTGCAGAGTGGACTCCTCCGGATGTTGTAGTCCGACAGG GTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTC CGGCGGAATGCCCTCCTTGTCCTGGATCTTCTGTTTCACACCATCGATGG TGTCCGACGGTTCCACGTCCAGAGTGATCGTCTTACCCGTCAAGGTCTTC ACGAAGATCTGCATGCCGCCGCGGAGGCGAAGCGCCAGGTGCAGAGTGGA CTCCTTCTGGATGTTGTAGTCCGGCAGGGTGCGGCCGTCCTCCAGTTGCC TCCCCGCGAAGATTAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC TGGATCTTCTGCTTCACGCCATCGATGGTGTCGGACGGCTCCATGTCGAG GGTGATCGTCTTACCCGTCAAGGTCTTCACGAAGATCTACATGCCGCCGC GGAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCC GACAGGGTGCGGCCGTCCTCCAGTTGCTTGCCCGCGAAGATCAGACGCTG CTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCAT CGATGGTGTCGGACGGCTCCACGTCCAGAGTGATCGTCTTACCCGTCAAG GTCTTCACGAAGATCTGCATGCCGCCGCGGAGGCGAAGCACCAGGTGGAG AGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGGCCTCCA GCTGCTTGCCCGCGAAGATCAGACCCTGCTGGTCCGGG
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Coding sequence (CDS) from alignment at P-canaliculata_contig9807:10489..11676+

>mRNA_P-canaliculata_contig9807.23904.1 ID=mRNA_P-canaliculata_contig9807.23904.1|Name=mRNA_P-canaliculata_contig9807.23904.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at P-canaliculata_contig9807:10489..11676+ (Pelvetia canaliculata dioecious)
ATGCCCTCCTTGTCCTGGATCTTCTGTTTCACGCCATCGATGGTGTCGGA
CGGCTCCACGTCCAAAGTAATCGTTTTCCCCGTCAAGGTCGTCACGAAGA
TCTGCATGCCGCCGCGGAGGCGAAGCACCAGGTGCAGAGTGGACTCCTCC
GGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCG
AAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTT
CTGTTTCACACCATCGATGGTGTCCGACGGTTCCACGTCCAGAGTGAATG
CCCTCCTTGTCCTGGATCTTCTGTTTCACGCCATCGATGGTGTCGGACGG
CTCCACGTCCAAAGTAATCGTTTTCCCCGTCAAGGTCGTCACGAAGATCT
GCATGCCGCCGCGGAGGCGAAGCACCAGGTGCAGAGTGGACTCCTCCGGA
TGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAG
ATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCTG
TTTCACACCATCGATGGTGTCCGACGGTTCCACGTCCAGAGTGA
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