prot_P-canaliculata_contig9795.23891.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9795.23891.1
Unique Nameprot_P-canaliculata_contig9795.23891.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length105
Homology
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BLAST of mRNA_P-canaliculata_contig9795.23891.1 vs. uniprot
Match: D7FMX7_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.740e-18
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0 
Query:   31 RGRKRKILLDASGVSAERPVCAEEVFYLVLDPSFQQASLKKYFRAILAIQHGYARGSIPLWKPRGG 96
            RGR+RK LLD SG++AE  V A+E+  L+ D S QQASLK Y RA+LAIQHG  RGSIP+W+P GG
Sbjct: 1197 RGRRRKALLDPSGITAEEVVGADELLALLGDSSLQQASLKNYLRAVLAIQHGCVRGSIPVWRPDGG 1262
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BLAST of mRNA_P-canaliculata_contig9795.23891.1 vs. uniprot
Match: A0A6H5JQI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI7_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.200e-17
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 0 
Query:   31 RGRKRKILLDASGVSAERPVCAEEVFYLVLDPSFQQASLKKYFRAILAIQHGYARGSIPLWKPRGG 96
            RGR+RK LLD SG++AE+ V A+E+  L+ D S QQASLK Y RAILAIQ+G  RGSIP+W+P  G
Sbjct:  241 RGRRRKALLDPSGITAEKVVGADELLALLRDSSLQQASLKNYLRAILAIQYGCVRGSIPVWRPVDG 306
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9795.23891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMX7_ECTSI3.740e-1863.64DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JQI7_9PHAE3.200e-1762.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9795contigP-canaliculata_contig9795:9184..9929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9795.23891.1mRNA_P-canaliculata_contig9795.23891.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9795 9184..10565 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9795.23891.1 ID=prot_P-canaliculata_contig9795.23891.1|Name=mRNA_P-canaliculata_contig9795.23891.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=105bp
MPTRISDGGESGDAPNQCRTGSLTPPSASHRGRKRKILLDASGVSAERPV
CAEEVFYLVLDPSFQQASLKKYFRAILAIQHGYARGSIPLWKPRGGHFTD
NPQQA
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