prot_P-canaliculata_contig9794.23890.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9794.23890.1
Unique Nameprot_P-canaliculata_contig9794.23890.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length106
Homology
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BLAST of mRNA_P-canaliculata_contig9794.23890.1 vs. uniprot
Match: D7FVQ4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ4_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.350e-22
Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 0 
Query:    1 VSTKFADVTRSNKEGESAFEARLGDMEHQLRQAEKQASDAKTECERVRERAERKLAGKEAELNRLWERLSSKKEKFAAQKVALERESKALNKRLSEARLEEEGMR 105
            VS+ FA+   S KEGE++F+A+LGD+E  L + EKQ   ++ EC R++E A+R++  KEAEL  L ERLS KK+KFAAQK++LE+E K L  +LSE R+ EEG+R
Sbjct:  469 VSSNFAEAANSKKEGETSFDAKLGDLEKHLNKTEKQLLGSQAECVRIKEAAQREVKEKEAELESLRERLSRKKDKFAAQKLSLEQEIKTLTDKLSEGRVVEEGIR 573
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9794.23890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVQ4_ECTSI1.350e-2253.33Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..68
NoneNo IPR availableCOILSCoilCoilcoord: 73..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9794contigP-canaliculata_contig9794:10635..11885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9794.23890.1mRNA_P-canaliculata_contig9794.23890.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9794 10536..11885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9794.23890.1 ID=prot_P-canaliculata_contig9794.23890.1|Name=mRNA_P-canaliculata_contig9794.23890.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=106bp
VSTKFADVTRSNKEGESAFEARLGDMEHQLRQAEKQASDAKTECERVRER
AERKLAGKEAELNRLWERLSSKKEKFAAQKVALERESKALNKRLSEARLE
EEGMR*
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