prot_P-canaliculata_contig9768.23870.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9768.23870.1
Unique Nameprot_P-canaliculata_contig9768.23870.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length289
Homology
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.170e-26
Identity = 60/163 (36.81%), Postives = 83/163 (50.92%), Query Frame = 0
Query:  132 DGEEPFDAVVGDEGMTPEMCYEICTMVSARYFGVYAGKECGCGSNSDYIVF------GGTPGTCDMSCAGDSDYSCGGTEAYDMYQLVDNNIGLDDDSPEGGLLECSNGLAGVESSDGSVCCAAACGSCDGSRCVGTGGCCAEYIKAKYDTCSEKQSAPCVMD 288
            D E+PF        +T E CYE+C   S+ YFG+  G  C CG    ++          T  TC  +C G  D +CGG +A+D+YQ+               L  C+ G+ GVE++ G VCC  +CG C G RCVG GGCC   I+++ D C    +APCV +
Sbjct:  224 DYEDPFTVSSTVSDLTAEACYELCASESSLYFGLVEGNVCSCGDEETFVETFLDTYDEQTAATCSTACPGSPDETCGGAQAFDLYQI---------------LPTCTGGIVGVEAASGDVCCPFSCGECGGDRCVGEGGCCEHTIQSREDLCEYTNAAPCVFN 371          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.860e-14
Identity = 68/218 (31.19%), Postives = 103/218 (47.25%), Query Frame = 0
Query:   14 IGCFEETGSDPFSYRVEIT--GMTPELCYAECTTKDALYMGLMGSNECACGE-DEDYLDSDKTSGTCDSVCEGDDS-ICGGVDSFGLYKFLSSSSDSGTFHKSDLDHNGEIDGYAYKKCYDFDGEEPF--DAVVGDEGMTPEMCYEICTMVSARYFGVYAGKECGCGS-NSDYIVFGGTPGTCDMSCAGDSDYSCGGTEAYDMYQLVDNNIGLDDDSP 224
            +GC+E+   D     + ++   MT ELC  E T   + Y       EC CG  D DY    +++G C   C GD S  CGG ++  +Y +   S+ S T        +  +       CY  D E+    D V+ D  MT E+C   C    + YF    G+EC CGS  +DY + G +   C  +C+GD+D +CGG +A ++Y+  D++      SP
Sbjct:  200 LGCYEDDPEDRIMDNLALSDSSMTTELC--ELTCVGSTYFATQYRRECWCGSADADYALHGESTG-CTYACSGDTSQTCGGFNAANVYLYPDDSTPSPTPSPIQEGPSPALG------CYADDPEDRIMDDLVLSDSSMTTELCELTCE--GSTYFATQYGRECWCGSAGADYALHGEST-DCTYACSGDTDQTCGGFDAANVYRYPDDSTPSPTPSP 405          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.490e-13
Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = 0
Query:  113 DLDHNGEIDGYAYKKCYDFD--GEEPFDAVVGDEGMTPEMCYEICTMVSARYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSDYSCGGTEAYDMYQLVDNNIG 218
            D+D +G +D Y +  CY          + + G+E MT  +C+E C   SA YF ++ G  C CG+   Y+      G CD  C+GD   +CGG   YD+Y+L+++++G
Sbjct: 3174 DIDGDGNVDSYEHVGCYALSPTASVELEKLDGEEQMTKMLCFEACAAESADYFALFKGSVCTCGNEGGYLTMPMEMGICDTPCSGDVTATCGGYYDYDLYELMESDVG 3281          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: G4THU8_SERID (Uncharacterized protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4THU8_SERID)

HSP 1 Score: 78.6 bits (192), Expect = 1.360e-12
Identity = 67/211 (31.75%), Postives = 95/211 (45.02%), Query Frame = 0
Query:   15 GCFEETGSD---PFSYRVEITGMTPELCYAECTTKDALYMGLMGSNECACGEDEDYLDSDKTS-GTCDSVCEGDDS-ICGGVDSFGLYKFLSSSSDSGTFHKSDLDHNGEIDGYAYKKCYDFDGEEPFDAVVG-----DEGMTPEMCYEICTMVSARYFGVYAGKECGCGSNSDYIVFGGTPGT--CDMSCAGDSDYSCGGTEAYDMYQLV 213
            GCF ++ +    P    VE T  TP+ C   C  +   Y GL  S+EC C    +  +  +   G C+S C+GD +  CG  +   LYK  +S+S               IDG+ Y  CY   G+E  +  +G     D GMTP  C   C  +   Y GV    EC C ++   I   GT  T  C MSC+GD +  CGG+    +Y+ +
Sbjct:  142 GCFVDSVNARIVPNPVAVEGT-FTPQKCMDSCAAQGYEYAGLEFSHECFCANGINMANLQQVDIGECNSHCDGDAAHYCGAGNRLNLYKRTTSTS-----------VTQGIDGWTYDNCY---GDEVANRALGLRTYVDGGMTPAKCTAKCFSLGYNYAGVEYSDECYCANS---IGSSGTLKTDGCTMSCSGDRNAICGGSNRLTVYKYI 334          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: A0A499U6E2_PLAST (Gram-negative bacteria binding protein 1 n=1 Tax=Plautia stali TaxID=106108 RepID=A0A499U6E2_PLAST)

HSP 1 Score: 76.6 bits (187), Expect = 5.550e-12
Identity = 70/229 (30.57%), Postives = 94/229 (41.05%), Query Frame = 0
Query:   14 IGCFEETGSDP-----FSYRVEITGMTPELCYAECTTKDALYMGLMGSNECACGEDEDYLDSDKTSGTCDSVCEGDDS-ICGGVDSFGLYKFLSSSSDSGTFHKSDLDHNGEIDGYAYKKCY-DFDGEEPFDAVVGDEG--MTPEMCYEICTMVSARYFGVYAGKECGCGSNSDYIVFG--GTPGTCDMSCAGDSDYSCGGTEAYDMYQLVDNNIGLDDDSPEGGLLEC 231
            IGC++E  ++           E T +TPE C + C  K  LY GL  S EC C +D         S  C+S C+GD +  CGG     +Y              +D   N     Y    CY D  G       V  E   MTPE+C   C     RY G+    +C CG      + G   + G CDM CAGD  + CGG     +Y     +  + ++S EG L+ C
Sbjct:   27 IGCYKEISTEARLLSGAQQNFENT-LTPEKCISFCKGKGFLYAGLQYSYECFCAKDRPSFIHSADSSDCNSKCDGDKTKTCGGGFRLSVYDL------------ADKPVNYVQPNYV--GCYADEGGRRALTGKVAPESQEMTPELCVGFCFRNGYRYAGLQYRTQCFCGEE----LHGPRSSEGDCDMECAGDQRFLCGGGWRNSVY-----HTSIPNESEEGKLIGC 231          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 5.650e-12
Identity = 61/188 (32.45%), Postives = 85/188 (45.21%), Query Frame = 0
Query:   34 MTPELCYAECTTKDALYM--GLMGSNECACGEDEDYLDSDKTSGTCDSVCEGDDSI-CGGVDSFGLYKFLSSSSDSGTFHKSDLDHNGEIDGYAYKKCYDFDGEEPFDAVVGDEGMTPEMCYEICTMVSA------RYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSDYSCGGTEAYDMYQL 212
            MTP +C   C  + + Y         EC C +DE        + TCD  C GDDSI CGG DSF LY       + G       D N       Y  C+    ++  D V+G +  + EM  E C    A       Y+    G EC C +   ++  G   GTCDM+C GD+  +CGG +A+D+++L
Sbjct:    1 MTPTVCADYCRGQPSSYTHYATQYGRECWC-QDESVDLRRHGAATCDYQCSGDDSIVCGGFDSFSLYDL-----EEGELPSPPTDDN-------YVGCF---ADDQNDRVLGAKSSSNEMTSEACASYCADESPGNTYYATQWGHECWCAAEV-HLRHG--DGTCDMACTGDAGTTCGGFDAFDLFEL 169          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: UPI0006D4E702 (uncharacterized protein LOC106688707 n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4E702)

HSP 1 Score: 75.1 bits (183), Expect = 1.820e-11
Identity = 65/227 (28.63%), Postives = 93/227 (40.97%), Query Frame = 0
Query:   14 IGCFEETGSDP-----FSYRVEITGMTPELCYAECTTKDALYMGLMGSNECACGEDEDYLDSDKTSGTCDSVCEGDDS-ICGGVDSFGLYKFLSSSSDSGTFHKSDLDHNGEIDGYAYKKCY-DFDGEEPFDAVVGDEG--MTPEMCYEICTMVSARYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSDYSCGGTEAYDMYQLVDNNIGLDDDSPEGGLLEC 231
            IGC++E  ++           + T +TPE C + C  K   Y GL  S EC C +D         S  C+S C+GD + ICGG     +Y  +              D         Y  C+ D  G       +  E   MTPE+C   C     RY G+    +C CG     +    + G CDM CAGD+ + CGG     +Y+       + ++S EG L+ C
Sbjct:   27 IGCYKEISNEARLLSGAQQNFQNT-LTPEKCISFCKGKGFHYAGLQYSYECFCAKDRPSFIHSADSSDCNSKCDGDKTKICGGGLKLSVYDLV--------------DKPVNYVQPNYVGCFADEGGRRALTGKIAPESQDMTPELCVGFCFRNGYRYAGLQYRSQCFCGEEP--LGPRSSEGDCDMECAGDTRFLCGGGWRNSIYKTS-----IPNESEEGKLIGC 231          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: D7G975_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G975_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 4.280e-10
Identity = 64/209 (30.62%), Postives = 93/209 (44.50%), Query Frame = 0
Query:   14 IGCFEETGSDPFSYRVEITG-MTPELCYAECTTKDA--LYMGLMGSNECACGEDEDYLDSDKTSGTCDSVCEGDDSI-CGGVDSFGLYKFLSSSSDSGTFHKSDLDHNGEIDGYAYKKCYDFDGEEPFDAVVGDE----GMTPEMCYEICTMVSAR--YFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSDYSCGGTEAYDMYQL 212
            +GC+++  SD     +  +  MTP +C A C  + A   Y  +    EC C +D D +D      TCD  C GD SI CGG  +F LY       +         D N       Y  C+    ++  D V+G E     MT E C + C   S R  Y+    G +C C    D +  G   G C  +C GD+  +CGG EA+D++++
Sbjct:  281 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGGECWC-QDTD-IDLRHGEATCDYACSGDASISCGGFYAFTLYDL-----EGANLPTPPADDN-------YVGCF---ADDLQDRVLGAETSSSSMTSEACADYCANESPRNMYYATQYGAQCWCAEEVD-LRHG--EGRCAYACTGDAKTTCGGFEAFDLFEV 469          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: A0A6H5L0X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X8_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 8.060e-9
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  137 FDAVVGDEGMTPEMCYEICTMVSARYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSDYSCGGTEAYDMY 210
            F  V G + MT  +C + C   +  Y+G   G+EC CG+N+DY V+G    TCDM C GDS  +CGG  A   Y
Sbjct:   99 FPVVFGSDSMTTAICADTCAEYA--YYGTQYGRECWCGNNADYAVYGEV--TCDMECTGDSSATCGGFNAMSFY 168          
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.340e-8
Identity = 52/164 (31.71%), Postives = 82/164 (50.00%), Query Frame = 0
Query:   56 SNECACGEDEDYLDSDKTSGTCDSVCEGDDSI-CGGVDSFGLYKFLSSSSDSGTFHKSDLDHNGEIDGYAYKKCYDFDGEEPFDAVVGDEGMTPEMCYEICTMVSA------RYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSDYSCGGTEAYDMYQL 212
            S +C C +DE+ +D     GTCD  C GD S+ CGG+ SF LY+      +      +  D +       Y  C+  D +   D V+G +  + EM  E+C    A      +++    G+EC C  + D + +G   GTCD +C G  + +CGG EA+D+++L
Sbjct:   24 SRQCWC-QDEN-IDLRHGEGTCDYACTGDGSVVCGGILSFSLYEL-----EEAILPTAPTDDS-------YVGCFADDRQ---DRVLGVQTSSSEMTSEVCAAYCANESFGNKFYATQYGEECWCAPSVD-LRYG--EGTCDYACTGAVETTCGGFEAFDLFEL 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9768.23870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FJ60_ECTSI1.170e-2636.81WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEK9_ECTSI1.860e-1431.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ68_ECTSI1.490e-1334.26WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
G4THU8_SERID1.360e-1231.75Uncharacterized protein n=1 Tax=Serendipita indica... [more]
A0A499U6E2_PLAST5.550e-1230.57Gram-negative bacteria binding protein 1 n=1 Tax=P... [more]
D8LQX7_ECTSI5.650e-1232.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0006D4E7021.820e-1128.63uncharacterized protein LOC106688707 n=1 Tax=Halyo... [more]
D7G975_ECTSI4.280e-1030.62Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5L0X8_9PHAE8.060e-943.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLL4_9PHAE1.340e-831.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 122..213
e-value: 0.0038
score: 16.9
coord: 10..100
e-value: 3.3E-4
score: 28.3
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 13..90
e-value: 6.4E-12
score: 45.5
coord: 128..203
e-value: 1.5E-9
score: 37.9
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 10..100
score: 9.135
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 122..213
score: 9.15
NoneNo IPR availablePANTHERPTHR24269:SF16coord: 10..104
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 10..104
NoneNo IPR availablePANTHERPTHR24269:SF16coord: 128..270
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 128..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9768contigP-canaliculata_contig9768:2765..6229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9768.23870.1mRNA_P-canaliculata_contig9768.23870.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9768 1058..7415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9768.23870.1 ID=prot_P-canaliculata_contig9768.23870.1|Name=mRNA_P-canaliculata_contig9768.23870.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=289bp
MSYYAGYVVGTSYIGCFEETGSDPFSYRVEITGMTPELCYAECTTKDALY
MGLMGSNECACGEDEDYLDSDKTSGTCDSVCEGDDSICGGVDSFGLYKFL
SSSSDSGTFHKSDLDHNGEIDGYAYKKCYDFDGEEPFDAVVGDEGMTPEM
CYEICTMVSARYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSDYS
CGGTEAYDMYQLVDNNIGLDDDSPEGGLLECSNGLAGVESSDGSVCCAAA
CGSCDGSRCVGTGGCCAEYIKAKYDTCSEKQSAPCVMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd