prot_P-canaliculata_contig10144.236.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10144.236.1
Unique Nameprot_P-canaliculata_contig10144.236.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length172
Homology
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: D7FRA7_ECTSI (PRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA7_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 7.130e-70
Identity = 110/172 (63.95%), Postives = 134/172 (77.91%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 172
            R+L+G+ G A AGKSTL+Q+L A   I+ GA  +QCVSMD YS+PN++L AE   + LGR CTLKDIKGLP TL+   LLRDL RLRT   E I LPAY R LH+PVP+SV +A DC++V+ EGLHLLH  GLWK++S A +RT+FLDI R+ CF+RVVGRKVANGRSRESS
Sbjct:   82 RVLVGLCGSAAAGKSTLAQILCAAYGIIWGASSIQCVSMDAYSYPNAHLAAE-VTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRESS 252          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A542SMG6_9MICO (Pantothenate kinase n=1 Tax=Rarobacter incanus TaxID=153494 RepID=A0A542SMG6_9MICO)

HSP 1 Score: 102 bits (253), Expect = 9.760e-24
Identity = 66/169 (39.05%), Postives = 92/169 (54.44%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSR 169
            RLL+GIVG  G+GKS ++ +L A  +     P    + MDG+   N  L      D LG    L+  KG P++ +V  L   L R+R  GN  +  PAYDR LHEPV   V +    ++ I EG +LL   G W   ++A   TV+LD+E A   ER++ R VA+GR+R
Sbjct:   19 RLLLGIVGAPGSGKSFVANMLAAALSPRGRTP-APVIEMDGFHLSNEQL------DLLG----LRAQKGAPASFDVEGLNCLLHRVRERGNSSVFAPAYDRALHEPVAARVRVDPADELAIVEGNYLLLPEGQWVACADALDLTVYLDVEDALRRERLMARHVAHGRTR 176          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: UPI0007A377E3 (nucleoside/nucleotide kinase family protein n=3 Tax=Nocardia TaxID=1817 RepID=UPI0007A377E3)

HSP 1 Score: 100 bits (249), Expect = 4.580e-23
Identity = 65/173 (37.57%), Postives = 91/173 (52.60%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLR-TAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 172
            R ++GI GP GAGKSTLS+ +R      +GA   +   MDG+  PN+ L   RA  NL R       KG P T +V   L  L RLR T   EP+  P +DR + EP P  V      ++ I EG +LL ++G W  V E      +LD+ER    +R++ R +  GR+ E++
Sbjct:   27 RYVLGIAGPPGAGKSTLSKAIRDDLNHRAGARIAEIAPMDGFHLPNAVL---RATANLER-------KGEPHTFDVAAFLETLRRLRDTPLGEPVPWPTFDRAIEEPTPAGVVFDRH-EIAITEGNYLLLSDGSWSGVREFLDEVWYLDVERDVLEQRLLRRHIRGGRTSEAA 188          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A1A3IEE7_9MYCO (Nucleoside/nucleotide kinase family protein n=2 Tax=Mycobacterium sp. 1423905.2 TaxID=1856859 RepID=A0A1A3IEE7_9MYCO)

HSP 1 Score: 98.2 bits (243), Expect = 2.010e-22
Identity = 61/169 (36.09%), Postives = 92/169 (54.44%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVS-MDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRS 168
            R++IG+ GP G+GKSTL+ +L  V  I +G      V  MDG+   N  L A+           +  IKG   T +V+  L  L R+R  G + + +P Y R LHEPV  S+AI  +  +V+ EG +LL   G W++VS    +  FLD++   C +R+V R +A G++
Sbjct:   11 RIIIGLAGPPGSGKSTLASVL--VDEINAGEHHSAVVMPMDGFHLSNRQLRAKG----------IAPIKGARETFDVDGFLAALARIRKPGPQTVYVPDYRRDLHEPVAASIAITPETNIVVLEGNYLLLGCGPWREVSAYVDQPWFLDVDWNVCRQRLVARHIATGKA 167          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A7K0DFC0_9NOCA (Pantothenate kinase n=2 Tax=Nocardia aurantia TaxID=2585199 RepID=A0A7K0DFC0_9NOCA)

HSP 1 Score: 97.1 bits (240), Expect = 1.030e-21
Identity = 64/176 (36.36%), Postives = 88/176 (50.00%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEP----ILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 172
            RL++G+ GP GAGKST + +LR       GAP      MDG+ F N+ L A            L + KG P T +V   +    RLR A + P    +  PAYDR LHEPVP+ + +  D ++V+ EG +LLH+   W DV        +LD       ER++ R    GR  ES+
Sbjct:   25 RLVLGVAGPPGAGKSTFAAMLRDEIDRQGGAPVAGVAPMDGFHFTNAELAARG----------LAERKGAPDTFDVAGYVN---RLRAARDTPTGRALRWPAYDRDLHEPVPDRIVL-DDLRIVLTEGNYLLHDRAGWADVRPCLDEVWYLDAPAELRTERLLDRHRRGGRDAESA 186          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: G8RZA6_ACTS5 (Putative fructose transport system kinase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) TaxID=134676 RepID=G8RZA6_ACTS5)

HSP 1 Score: 96.3 bits (238), Expect = 1.600e-21
Identity = 70/174 (40.23%), Postives = 94/174 (54.02%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAP--WVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 172
            R+LIGI GP GAGKSTL+  L+A  T   GA    V  V MDG+   N+ L AER          L+D KG P T + +     L R R A +E I  PAY R LHEPVP++  I    +++I EG +LL  +  W  V E      +LD+      +R+V R+VA GR+ E++
Sbjct:   24 RVLIGIAGPPGAGKSTLAAWLQARVTERFGADPLLVAQVPMDGFHLSNAVL-AERG---------LRDRKGAPETFDRDGFADLLCRARDAQDE-IGAPAYSRELHEPVPDAHRIPASVRLIISEGNYLLLPDDGWDRVGECLDEIWYLDVPWEVTRQRLVDRQVAGGRTPEAA 186          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A0Q6FZE4_9MICO (PRK domain-containing protein n=4 Tax=Sanguibacter TaxID=60919 RepID=A0A0Q6FZE4_9MICO)

HSP 1 Score: 95.9 bits (237), Expect = 2.400e-21
Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRS 168
            RLL+GI G  GAGKSTL+  L  V  +L+       V MDG+        A+R ++ LGR     D KG P T +V+  +  L RLR  G   +  P + R + EPV  +VA+  D ++V+ EG +LLH++  W  V        +LD+ +    ER+V R   +GRS
Sbjct:   33 RLLLGIAGQPGAGKSTLASEL--VDALLAAGTTAVLVPMDGFHL------AQRELERLGRA----DRKGAPDTFDVDGYVALLARLRAPGGRTVYAPEFRREIEEPVAGAVAVGPDARVVVTEGNYLLHDDHGWDQVRGLLDTVWYLDLPQTTRVERLVARLERHGRS 188          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A7X8USU0_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7X8USU0_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 2.890e-21
Identity = 52/166 (31.33%), Postives = 87/166 (52.41%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANG 166
            RLL+G+ G  G+GKST + ++  +   L     + CV MDG+ +P++ L+     +  GR+  L   KG P +  V  L   L  L+ A    + LP YDR LHEP+P+ + +  + ++V+ EG ++L+    W  V E  +  + L  + A   +RV+ R +  G
Sbjct:   64 RLLVGLAGIPGSGKSTFAAIVGLLADRLLAPGALVCVGMDGWHWPSAVLQQRTTCNPDGRIVPLSQRKGGPESFEVAALAAALRELKNA-RAAVHLPVYDRRLHEPIPDGLNVPPETRIVLLEGNYVLYPTPPWDQVFEQLHPRLMLIADPAVARQRVIARHIRGG 228          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: UPI00048903F6 (nucleoside/nucleotide kinase family protein n=1 Tax=Selenomonas sp. AE3005 TaxID=1485543 RepID=UPI00048903F6)

HSP 1 Score: 94.7 bits (234), Expect = 1.220e-20
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 172
            R++  +  P   GKSTL Q L  +    +G   VQ + MDG+ +PN+YLE+   ++  G+  TL+ IKG P T +V  L     +++ A     L P YDR LH P+P+  A+  +  +++ EG  LL N   W D+ E    T+ + +      +R++ RK+  G S + +
Sbjct:   48 RIMAFLAAPPATGKSTLLQFLEQLSHEQAGTQAVQALGMDGFHYPNAYLESH-TIERDGKTITLRSIKGAPETFDVTGLRA---KIKEAKQGKSLWPVYDRKLHNPIPD--ALVVNRNILLVEGNWLLLNEPQWHDLHELADYTLSIKVAPELLKDRLIQRKIQGGLSEKDA 213          
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A5C5DAR3_9ENTR (Nucleoside/nucleotide kinase family protein n=1 Tax=Buttiauxella sp. B2 TaxID=2587812 RepID=A0A5C5DAR3_9ENTR)

HSP 1 Score: 94.0 bits (232), Expect = 1.790e-20
Identity = 59/172 (34.30%), Postives = 85/172 (49.42%), Query Frame = 0
Query:    1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 172
            RL++ +  P G GKSTL      + ++    P +Q + MDG+   N YL A            LK  KG P T NV  L   L  L+T G+     P YDR LH+PV N  AIA +  +V+ EG  LL N   W+ +      ++F+       FER++GRK+  G +R+ +
Sbjct:   42 RLVVFLAAPPGTGKSTLVSFWEYLSSLDETLPAIQALPMDGFHHYNEYLLANN----------LKQHKGAPQTFNVQKLTNALRSLQTPGS---YWPQYDRNLHDPVEN--AIAVEAPIVVVEGNWLLLNQPEWQALRSLCDYSIFISASPEQLFERLIGRKIRGGLTRDQA 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA7_ECTSI7.130e-7063.95PRK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A542SMG6_9MICO9.760e-2439.05Pantothenate kinase n=1 Tax=Rarobacter incanus Tax... [more]
UPI0007A377E34.580e-2337.57nucleoside/nucleotide kinase family protein n=3 Ta... [more]
A0A1A3IEE7_9MYCO2.010e-2236.09Nucleoside/nucleotide kinase family protein n=2 Ta... [more]
A0A7K0DFC0_9NOCA1.030e-2136.36Pantothenate kinase n=2 Tax=Nocardia aurantia TaxI... [more]
G8RZA6_ACTS51.600e-2140.23Putative fructose transport system kinase n=1 Tax=... [more]
A0A0Q6FZE4_9MICO2.400e-2136.31PRK domain-containing protein n=4 Tax=Sanguibacter... [more]
A0A7X8USU0_9BACT2.890e-2131.33Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
UPI00048903F61.220e-2031.98nucleoside/nucleotide kinase family protein n=1 Ta... [more]
A0A5C5DAR3_9ENTR1.790e-2034.30Nucleoside/nucleotide kinase family protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..172
e-value: 2.3E-38
score: 133.4
NoneNo IPR availablePANTHERPTHR10285URIDINE KINASEcoord: 1..167
NoneNo IPR availablePANTHERPTHR10285:SF81ATP-DEPENDENT KINASE YFH7coord: 1..167
IPR006083Phosphoribulokinase/uridine kinasePFAMPF00485PRKcoord: 3..170
e-value: 3.1E-7
score: 30.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10144contigP-canaliculata_contig10144:10008..11370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10144.236.1mRNA_P-canaliculata_contig10144.236.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10144 10008..11370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10144.236.1 ID=prot_P-canaliculata_contig10144.236.1|Name=mRNA_P-canaliculata_contig10144.236.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=172bp
RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLE
AERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYD
RGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIE
RACCFERVVGRKVANGRSRESS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006083PRK/URK
IPR027417P-loop_NTPase