mRNA_P-canaliculata_contig10144.236.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: D7FRA7_ECTSI (PRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA7_ECTSI) HSP 1 Score: 223 bits (567), Expect = 7.130e-70 Identity = 110/172 (63.95%), Postives = 134/172 (77.91%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 516 R+L+G+ G A AGKSTL+Q+L A I+ GA +QCVSMD YS+PN++L AE + LGR CTLKDIKGLP TL+ LLRDL RLRT E I LPAY R LH+PVP+SV +A DC++V+ EGLHLLH GLWK++S A +RT+FLDI R+ CF+RVVGRKVANGRSRESS Sbjct: 82 RVLVGLCGSAAAGKSTLAQILCAAYGIIWGASSIQCVSMDAYSYPNAHLAAE-VTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRESS 252
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A542SMG6_9MICO (Pantothenate kinase n=1 Tax=Rarobacter incanus TaxID=153494 RepID=A0A542SMG6_9MICO) HSP 1 Score: 102 bits (253), Expect = 9.760e-24 Identity = 66/169 (39.05%), Postives = 92/169 (54.44%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSR 507 RLL+GIVG G+GKS ++ +L A + P + MDG+ N L D LG L+ KG P++ +V L L R+R GN + PAYDR LHEPV V + ++ I EG +LL G W ++A TV+LD+E A ER++ R VA+GR+R Sbjct: 19 RLLLGIVGAPGSGKSFVANMLAAALSPRGRTP-APVIEMDGFHLSNEQL------DLLG----LRAQKGAPASFDVEGLNCLLHRVRERGNSSVFAPAYDRALHEPVAARVRVDPADELAIVEGNYLLLPEGQWVACADALDLTVYLDVEDALRRERLMARHVAHGRTR 176
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: UPI0007A377E3 (nucleoside/nucleotide kinase family protein n=3 Tax=Nocardia TaxID=1817 RepID=UPI0007A377E3) HSP 1 Score: 100 bits (249), Expect = 4.580e-23 Identity = 65/173 (37.57%), Postives = 91/173 (52.60%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLR-TAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 516 R ++GI GP GAGKSTLS+ +R +GA + MDG+ PN+ L RA NL R KG P T +V L L RLR T EP+ P +DR + EP P V ++ I EG +LL ++G W V E +LD+ER +R++ R + GR+ E++ Sbjct: 27 RYVLGIAGPPGAGKSTLSKAIRDDLNHRAGARIAEIAPMDGFHLPNAVL---RATANLER-------KGEPHTFDVAAFLETLRRLRDTPLGEPVPWPTFDRAIEEPTPAGVVFDRH-EIAITEGNYLLLSDGSWSGVREFLDEVWYLDVERDVLEQRLLRRHIRGGRTSEAA 188
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A7K0DFC0_9NOCA (Pantothenate kinase n=2 Tax=Nocardia aurantia TaxID=2585199 RepID=A0A7K0DFC0_9NOCA) HSP 1 Score: 97.1 bits (240), Expect = 1.030e-21 Identity = 64/176 (36.36%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEP----ILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 516 RL++G+ GP GAGKST + +LR GAP MDG+ F N+ L A L + KG P T +V + RLR A + P + PAYDR LHEPVP+ + + D ++V+ EG +LLH+ W DV +LD ER++ R GR ES+ Sbjct: 25 RLVLGVAGPPGAGKSTFAAMLRDEIDRQGGAPVAGVAPMDGFHFTNAELAARG----------LAERKGAPDTFDVAGYVN---RLRAARDTPTGRALRWPAYDRDLHEPVPDRIVL-DDLRIVLTEGNYLLHDRAGWADVRPCLDEVWYLDAPAELRTERLLDRHRRGGRDAESA 186
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A1I5XGN1_9FIRM (PRK domain-containing protein n=3 Tax=Butyrivibrio TaxID=830 RepID=A0A1I5XGN1_9FIRM) HSP 1 Score: 97.1 bits (240), Expect = 1.550e-21 Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 516 R+L+ + P GAGKSTL L + + VQ V MDG+ YL + + V N G+ + DIKG P T ++ L ++ L+ N P Y+R LH PV + AIA D +V+ EG +LL + W+D+SE T+ + E +R++ RK A+G +RE + Sbjct: 42 RILVMLAAPPGAGKSTLVSFLEHMAKEIIPTKKVQAVGMDGFHRRQEYLISHKTVVN-GKEIPMVDIKGAPITFDLEALKNKIIELKE--NAVCKWPEYNRMLHNPVED--AIAVDADIVLLEGNYLLLDQDGWRDISEYADYTISMTAEPKMLRKRLIDRKTASGNTREKA 208
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: G8RZA6_ACTS5 (Putative fructose transport system kinase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) TaxID=134676 RepID=G8RZA6_ACTS5) HSP 1 Score: 96.3 bits (238), Expect = 1.600e-21 Identity = 70/174 (40.23%), Postives = 94/174 (54.02%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAP--WVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 516 R+LIGI GP GAGKSTL+ L+A T GA V V MDG+ N+ L AER L+D KG P T + + L R R A +E I PAY R LHEPVP++ I +++I EG +LL + W V E +LD+ +R+V R+VA GR+ E++ Sbjct: 24 RVLIGIAGPPGAGKSTLAAWLQARVTERFGADPLLVAQVPMDGFHLSNAVL-AERG---------LRDRKGAPETFDRDGFADLLCRARDAQDE-IGAPAYSRELHEPVPDAHRIPASVRLIISEGNYLLLPDDGWDRVGECLDEIWYLDVPWEVTRQRLVDRQVAGGRTPEAA 186
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A0Q6FZE4_9MICO (PRK domain-containing protein n=4 Tax=Sanguibacter TaxID=60919 RepID=A0A0Q6FZE4_9MICO) HSP 1 Score: 95.9 bits (237), Expect = 2.400e-21 Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRS 504 RLL+GI G GAGKSTL+ L V +L+ V MDG+ A+R ++ LGR D KG P T +V+ + L RLR G + P + R + EPV +VA+ D ++V+ EG +LLH++ W V +LD+ + ER+V R +GRS Sbjct: 33 RLLLGIAGQPGAGKSTLASEL--VDALLAAGTTAVLVPMDGFHL------AQRELERLGRA----DRKGAPDTFDVDGYVALLARLRAPGGRTVYAPEFRREIEEPVAGAVAVGPDARVVVTEGNYLLHDDHGWDQVRGLLDTVWYLDLPQTTRVERLVARLERHGRS 188
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A7X8USU0_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7X8USU0_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.890e-21 Identity = 52/166 (31.33%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANG 498 RLL+G+ G G+GKST + ++ + L + CV MDG+ +P++ L+ + GR+ L KG P + V L L L+ A + LP YDR LHEP+P+ + + + ++V+ EG ++L+ W V E + + L + A +RV+ R + G Sbjct: 64 RLLVGLAGIPGSGKSTFAAIVGLLADRLLAPGALVCVGMDGWHWPSAVLQQRTTCNPDGRIVPLSQRKGGPESFEVAALAAALRELKNA-RAAVHLPVYDRRLHEPIPDGLNVPPETRIVLLEGNYVLYPTPPWDQVFEQLHPRLMLIADPAVARQRVIARHIRGG 228
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: A0A7C3FP08_9CHLR (Nucleoside/nucleotide kinase family protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3FP08_9CHLR) HSP 1 Score: 96.7 bits (239), Expect = 3.000e-21 Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCV--SMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRE 510 RLL+GI G G+GK+ + L + IL + + S+DG+ F N++LEA +D G V L+ IKG P T + R L R+R G + P Y R LH+P+PN+V + ++V+FEG +L + W V E F +F++ + R + G+S E Sbjct: 52 RLLVGISGLPGSGKTVTAATLARILDILGREHGDRAIHLSLDGFHFSNAWLEAHTGLDYDGNVVPLRRIKGAPCTFDAEAAARLLRRVRQ-GEGTVPFPIYSRKLHDPIPNAVEVTPSHRIVVFEGNYLFLDQPPWPQVRELFDVRLFVETPEEARLRNLRERHLRGGKSAE 222
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Match: UPI00048903F6 (nucleoside/nucleotide kinase family protein n=1 Tax=Selenomonas sp. AE3005 TaxID=1485543 RepID=UPI00048903F6) HSP 1 Score: 94.7 bits (234), Expect = 1.220e-20 Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 1 RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEAERAVDNLGRVCTLKDIKGLPSTLNVNVLLRDLLRLRTAGNEPILLPAYDRGLHEPVPNSVAIATDCQMVIFEGLHLLHNNGLWKDVSEAFYRTVFLDIERACCFERVVGRKVANGRSRESS 516 R++ + P GKSTL Q L + +G VQ + MDG+ +PN+YLE+ ++ G+ TL+ IKG P T +V L +++ A L P YDR LH P+P+ A+ + +++ EG LL N W D+ E T+ + + +R++ RK+ G S + + Sbjct: 48 RIMAFLAAPPATGKSTLLQFLEQLSHEQAGTQAVQALGMDGFHYPNAYLESH-TIERDGKTITLRSIKGAPETFDVTGLRA---KIKEAKQGKSLWPVYDRKLHNPIPD--ALVVNRNILLVEGNWLLLNEPQWHDLHELADYTLSIKVAPELLKDRLIQRKIQGGLSEKDA 213 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10144.236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10144.236.1 >prot_P-canaliculata_contig10144.236.1 ID=prot_P-canaliculata_contig10144.236.1|Name=mRNA_P-canaliculata_contig10144.236.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=172bp RLLIGIVGPAGAGKSTLSQLLRAVCTILSGAPWVQCVSMDGYSFPNSYLEback to top mRNA from alignment at P-canaliculata_contig10144:10008..11370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10144.236.1 ID=mRNA_P-canaliculata_contig10144.236.1|Name=mRNA_P-canaliculata_contig10144.236.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1363bp|location=Sequence derived from alignment at P-canaliculata_contig10144:10008..11370- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10144:10008..11370- >mRNA_P-canaliculata_contig10144.236.1 ID=mRNA_P-canaliculata_contig10144.236.1|Name=mRNA_P-canaliculata_contig10144.236.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at P-canaliculata_contig10144:10008..11370- (Pelvetia canaliculata dioecious)back to top |