Homology
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
A0A6H5KNF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNF9_9PHAE)
HSP 1 Score: 67.8 bits (164), Expect = 3.140e-11
Identity = 40/84 (47.62%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 16 GLPPLLRAAEKGITVAVRVLLGAPTINVNARAPRN--KKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHL 261
G P+ RAA G+T A+R LL + +N R R K ++G MLLGAGA SLADRR WTA+HFA+WKGHL
Sbjct: 29 GYLPIQRAAANGLTAALRELLSTSSTTINKRRKRGIGKIDLDATVPQSGKT----MLLGAGASASLADRRGWTALHFASWKGHL 108
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
A0A526RU79_9HYPH (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A526RU79_9HYPH)
HSP 1 Score: 56.2 bits (134), Expect = 6.040e-8
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 25 PLLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHLCE 267
PL AA KG ++ L+ P I++NARA +TAL+ AAR GHL+ V++L+ GAD++LAD+ + A KG E
Sbjct: 8 PLSLAAAKGHFECIQALVKHPQIDINARADYYGRTALIEAARNGHLDVVRLLVEHGADVNLADKTGRNSALIEAIKGRHYE 88
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
UPI001EE6334B (ankyrin repeat, PH and SEC7 domain containing protein secG-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE6334B)
HSP 1 Score: 57.4 bits (137), Expect = 1.420e-7
Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 28 LLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHL 261
L A G VR +L A +++N R ++TA++ AAR GH E V++L+G GAD+SL D+ +H+A W G +
Sbjct: 253 LYSACTDGDLGTVRWILAAGHVDINTRGGWRRRTAVMEAARWGHKEVVELLVGKGADVSLLDKYRRNILHYACWSGDV 330
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
A0A8I0KAH5_9RICK (Ankyrin repeat domain-containing protein n=1 Tax=Wolbachia endosymbiont of Pentalonia nigronervosa TaxID=1301914 RepID=A0A8I0KAH5_9RICK)
HSP 1 Score: 56.2 bits (134), Expect = 3.230e-7
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 22 PPLLRAAEKGITVAVRVLL----GAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAA-----WKGH 258
PPL +AAE +R LL G ++VNA RNK+TAL AA GH+EAV+ LL AGADI ++ D T ++ A+ ++GH
Sbjct: 11 PPLHQAAENNEVDVMRGLLKKEGGEEDVDVNAVEDRNKETALHFAAGFGHIEAVEFLLAAGADIDAKNKYDETPLYCASRDHRDYQGH 98
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
UPI001CFBE906 (notch-regulated ankyrin repeat-containing protein n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBE906)
HSP 1 Score: 53.1 bits (126), Expect = 5.710e-7
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 37 AAEKGITVAVRVLLGAPT---INVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGH 258
A +KG T + LL T NVN+ P TAL + R G+LE V++L+ GADI LA+R W+A+H AA+ GH
Sbjct: 18 AVKKGNTKELHSLLQNMTSSEFNVNSFFPEEGHTALHQSVRDGNLELVKLLVKFGADIRLANRDGWSALHIAAFGGH 94
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
A0A8K0SHU8_9HYPO (Glycerophosphoryl diester phosphodiesterase family-domain-containing protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0SHU8_9HYPO)
HSP 1 Score: 54.3 bits (129), Expect = 1.810e-6
Identity = 29/75 (38.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 37 AAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHL 261
AAE+G++ V+ ++ A ++VNA+ T L +A+ GHL+ V+ L+ AGAD + D R+W A+ +AA++GH+
Sbjct: 414 AAEQGLSELVKDIV-ACGVDVNAQDKTRSWTPLTIASVHGHLDTVKALILAGADTRVPDHREWLAIDYAAYRGHM 487
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
UPI001FEE97D0 (ankyrin repeat domain-containing protein n=1 Tax=Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 TaxID=2563958 RepID=UPI001FEE97D0)
HSP 1 Score: 50.4 bits (119), Expect = 3.640e-6
Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 37 AAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKG 255
AA KG ++ L+ P I+++ARA +TAL+ AAR GHL+AV++L+ GAD++ AD+ + A KG
Sbjct: 4 AAAKGHYDCIQALVRHPQIDIDARADYYGRTALIEAARNGHLDAVRLLVEHGADVNAADKTGRNSALIEAIKG 76
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
UPI00165810C7 (ankyrin repeat domain-containing protein n=1 Tax=Thauera sp. CAU 1555 TaxID=2767595 RepID=UPI00165810C7)
HSP 1 Score: 52.8 bits (125), Expect = 3.740e-6
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 10 HDGLPPLLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGH 258
HDG PL AA +G + LL A ++A P N+ TAL+LAAR GH++AV+ LL AGAD +L + R TA +A +G+
Sbjct: 124 HDGWAPLHYAAFEGRLAILDKLL-ARGAKIDALTP-NRATALMLAARNGHVDAVRRLLRAGADTALKNDRGLTAAEWARTQGN 204
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
A0A670KBD5_PODMU (NOTCH regulated ankyrin repeat protein n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670KBD5_PODMU)
HSP 1 Score: 51.2 bits (121), Expect = 4.040e-6
Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 37 AAEKGITVAVRVLL---GAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGH 258
A G T AV LL + NVNA P + TAL + G+LE V++L+ GAD+ LA+R W+A+H AA+ GH
Sbjct: 27 AVRAGNTAAVHALLRTMNSCEFNVNAFGPEGQ-TALHQSVSDGNLELVKLLVRFGADVRLANRDGWSALHMAAFSGH 102
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match:
A0A7D7LGS5_9NOSO (Ankyrin repeat domain-containing protein n=1 Tax=Nostoc edaphicum CCNP1411 TaxID=1472755 RepID=A0A7D7LGS5_9NOSO)
HSP 1 Score: 53.1 bits (126), Expect = 4.580e-6
Identity = 36/65 (55.38%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 28 LLRAAEKGITVAVRVLLGAPTINVNARAPRNK---KTALVLAARAGHLEAVQMLLGAGADISLAD 213
LL AAE+G VAVR L NVNAR R K +T L+LAA GHLE V +LL AGADI+ D
Sbjct: 334 LLNAAEQGDVVAVRAWLSEGA-NVNARDQRRKTKNRTPLMLAASTGHLEVVNLLLDAGADINATD 397
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.14e-11 / Id = 47.62 Expect = 6.04e-8 / Id = 41.98 Expect = 1.42e-7 / Id = 38.46 Expect = 3.23e-7 / Id = 43.18 Expect = 5.71e-7 / Id = 44.16 Expect = 1.81e-6 / Id = 38.67 Expect = 3.64e-6 / Id = 41.10 Expect = 3.74e-6 / Id = 44.58 Expect = 4.04e-6 / Id = 42.86 Expect = 4.58e-6 / Id = 55.38 Sequence A0A6H5KNF9_9PHAE A0A526RU79_9HYPH UPI001EE6334B A0A8I0KAH5_9RICK UPI001CFBE906 A0A8K0SHU8_9HYPO UPI001FEE97D0 UPI00165810C7 A0A670KBD5_PODMU A0A7D7LGS5_9NOSO Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101244.214.1
>prot_P-canaliculata_contig101244.214.1 ID=prot_P-canaliculata_contig101244.214.1|Name=mRNA_P-canaliculata_contig101244.214.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=92bp
LTGHDGLPPLLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAAR back to top mRNA from alignment at P-canaliculata_contig101244:557..832+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig101244.214.1 ID=mRNA_P-canaliculata_contig101244.214.1|Name=mRNA_P-canaliculata_contig101244.214.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=276bp|location=Sequence derived from alignment at P-canaliculata_contig101244:557..832+ (Pelvetia canaliculata dioecious)TTGACAGGTCATGATGGCCTTCCACCGCTGCTCCGAGCGGCCGAGAAGGG
GATCACGGTGGCAGTCAGGGTTCTGCTGGGAGCCCCGACCATCAACGTAA
ACGCAAGAGCCCCCCGCAACAAGAAAACGGCCCTCGTGCTGGCGGCGCGA
GCCGGGCACCTGGAGGCCGTGCAGATGCTCCTCGGAGCCGGAGCAGACAT
TTCGCTCGCGGACAGGAGGGACTGGACGGCGATGCATTTCGCTGCGTGGA
AGGGCCATTTATGTGAGACGAGATAG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101244:557..832+
>mRNA_P-canaliculata_contig101244.214.1 ID=mRNA_P-canaliculata_contig101244.214.1|Name=mRNA_P-canaliculata_contig101244.214.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=552bp|location=Sequence derived from alignment at P-canaliculata_contig101244:557..832+ (Pelvetia canaliculata dioecious) back to top