Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 996 |
| Cds size | 693 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815585.3931074-CDS-P-canaliculata_contig101172:9..702 | 1622815585.3931074-CDS-P-canaliculata_contig101172:9..702 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101172 10..702 - |
| 1693494151.4248173-CDS-P-canaliculata_contig101172:9..702 | 1693494151.4248173-CDS-P-canaliculata_contig101172:9..702 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101172 10..702 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815585.4108598-UTR-P-canaliculata_contig101172:702..1005 | 1622815585.4108598-UTR-P-canaliculata_contig101172:702..1005 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101172 703..1005 - |
| 1693494151.4370682-UTR-P-canaliculata_contig101172:702..1005 | 1693494151.4370682-UTR-P-canaliculata_contig101172:702..1005 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101172 703..1005 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101172.206.1 >prot_P-canaliculata_contig101172.206.1 ID=prot_P-canaliculata_contig101172.206.1|Name=mRNA_P-canaliculata_contig101172.206.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=231bp
MERIDKVLGKEQRDYCKNKIDSARKALTSYLKSNYYKKCETEHLEFIGES
LTDAKQLHLLFLKQLAPETHNLDSFLLTKEELNKWKSSTTNKEVIAFIKN
VIRGTETIGKIIEKKNVLEQLEDKSNLLKVIGITNDLLEVFKDLNENGED
ILDDLNRVINSNIIKNFNKGARNEFITSVSDISKQYNKTKFSKLTDWIIN
FNEDTRKAIRKTLKKNLKSSHKFMKTRLLVF back to topmRNA from alignment at P-canaliculata_contig101172:10..1005- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101172.206.1 ID=mRNA_P-canaliculata_contig101172.206.1|Name=mRNA_P-canaliculata_contig101172.206.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=996bp|location=Sequence derived from alignment at P-canaliculata_contig101172:10..1005- (Pelvetia canaliculata dioecious)
TATGATATTGATATGGTAATTGGTATTCATGACCCTATAGGCATCGCTAT
AGCGATTACTAGTTCACTATCTCATTATTGGCTTGAATTAAATGCTTTAT
TAATATCTTTAAAAATAGGACAAAATACTGCAGAAGTAGAATCTCATTTA
CGTAAAGGTATAAATCCTGAATCTTTAGAAAACAATCCCTCTAAACTATC
AGAAGCTAAAGCACTTTTTAATTTAGCAAGTACCTGGAAGTCTGTCGCCT
TAATGAACGAAAAAAACAAAGAAGACCTAGTTGAAGCATGAGGAGGTTTG
AACATGGAACGTATTGATAAAGTTCTAGGGAAAGAACAGAGAGATTATTG
TAAAAATAAAATAGATAGTGCAAGAAAAGCTTTAACAAGCTATTTGAAAA
GTAATTATTATAAAAAATGTGAAACGGAACATCTAGAGTTCATAGGTGAA
AGTTTAACTGATGCAAAGCAATTACATCTGTTATTTTTAAAACAATTAGC
ACCAGAGACACATAATTTAGATAGCTTTTTACTTACTAAAGAAGAACTTA
ATAAATGGAAATCAAGTACAACTAATAAAGAGGTAATAGCGTTTATTAAA
AATGTTATTCGGGGTACAGAAACTATTGGTAAAATAATTGAAAAAAAGAA
TGTTTTAGAACAATTAGAAGATAAATCTAATCTTTTAAAAGTTATAGGAA
TTACAAATGATTTACTTGAAGTTTTTAAAGACTTAAACGAAAATGGAGAA
GATATTCTAGATGATTTAAATAGGGTTATTAATAGTAATATTATAAAAAA
CTTTAACAAAGGAGCTAGAAATGAATTTATAACTAGTGTTTCTGATATTT
CAAAACAATACAATAAAACTAAATTTAGTAAACTTACCGATTGGATTATT
AATTTTAATGAGGATACACGTAAGGCTATTCGTAAAACATTGAAAAAAAA
TCTTAAATCTTCTCATAAATTCATGAAAACTAGATTATTGGTTTTT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101172:10..1005- >mRNA_P-canaliculata_contig101172.206.1 ID=mRNA_P-canaliculata_contig101172.206.1|Name=mRNA_P-canaliculata_contig101172.206.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1386bp|location=Sequence derived from alignment at P-canaliculata_contig101172:10..1005- (Pelvetia canaliculata dioecious)
ATGGAACGTATTGATAAAGTTCTAGGGAAAGAACAGAGAGATTATTGTAA
AAATAAAATAGATAGTGCAAGAAAAGCTTTAACAAGCTATTTGAAAAGTA
ATTATTATAAAAAATGTGAAACGGAACATCTAGAGTTCATAGGTGAAAGT
TTAACTGATGCAAAGCAATTACATCTGTTATTTTTAAAACAATTAGCACC
AGAGACACATAATTTAGATAGCTTTTTACTTACTAAAGAAGAACTTAATA
AATGGAAATCAAGTACAACTAATAAAGAGGTAATAGCGTTTATTAAAAAT
GTTATTCGGGGTACAGAAACTATTGGTAAAATAATTGAAAAAAAGAATGT
TTTAGAACAATTAGAAGATAAATCTAATCTTTTAAAAGTTATAGGAATTA
CAAATGATTTACTTGAAGTTTTTAAAGACTTAAACGAAAATGGAGAAGAT
ATTCTAGATGATTTAAATAGGGTTATTAATAGTAATATTATAAAAAACTT
TAACAAAGGAGCTAGAAATGAATTTATAACTAGTGTTTCTGATATTTCAA
AACAATACAATAAAACTAAATTTAGTAAACTTACCGATTGGATTATTAAT
TTTAATGAGGATACACGTAAGGCTATTCGTAAAACATTGAAAAAAAATCT
TAAATCTTCTCATAAATTCATGAAAACTAGATTATTGGTTTTTATGGAAC
GTATTGATAAAGTTCTAGGGAAAGAACAGAGAGATTATTGTAAAAATAAA
ATAGATAGTGCAAGAAAAGCTTTAACAAGCTATTTGAAAAGTAATTATTA
TAAAAAATGTGAAACGGAACATCTAGAGTTCATAGGTGAAAGTTTAACTG
ATGCAAAGCAATTACATCTGTTATTTTTAAAACAATTAGCACCAGAGACA
CATAATTTAGATAGCTTTTTACTTACTAAAGAAGAACTTAATAAATGGAA
ATCAAGTACAACTAATAAAGAGGTAATAGCGTTTATTAAAAATGTTATTC
GGGGTACAGAAACTATTGGTAAAATAATTGAAAAAAAGAATGTTTTAGAA
CAATTAGAAGATAAATCTAATCTTTTAAAAGTTATAGGAATTACAAATGA
TTTACTTGAAGTTTTTAAAGACTTAAACGAAAATGGAGAAGATATTCTAG
ATGATTTAAATAGGGTTATTAATAGTAATATTATAAAAAACTTTAACAAA
GGAGCTAGAAATGAATTTATAACTAGTGTTTCTGATATTTCAAAACAATA
CAATAAAACTAAATTTAGTAAACTTACCGATTGGATTATTAATTTTAATG
AGGATACACGTAAGGCTATTCGTAAAACATTGAAAAAAAATCTTAAATCT
TCTCATAAATTCATGAAAACTAGATTATTGGTTTTT back to top
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