prot_P-canaliculata_contig101159.204.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig101159.204.1
Unique Name	prot_P-canaliculata_contig101159.204.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	189

Homology

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: UPI00167C3CC2 (peptidoglycan-associated lipoprotein Pal n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167C3CC2)

HSP 1 Score: 228 bits (581), Expect = 2.550e-73
Identity = 122/185 (65.95%), Postives = 137/185 (74.05%), Query Frame = 0

Query:    1 MAGAALLILSACATQPDPVAE-LPPPXXXXXXXXXXXXXXXXXXXXXXXXXQVVQPGSGFIPPIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRL 184
            +A AALL+LSACAT+PDPV E +  P                          V  P      P PGS+EDFA+Q+GGEPRVFFGY+Q+DLSPEA DVLRRQANWL+IY DATAVIEG+ADERGTREYNLALGARRA+SV+ FLVSQGVSPNRL+TISYGKERPID R    GWARNRNGFT+LRL
Sbjct:    6 IASAALLVLSACATKPDPVEEVIERPAEVETPGPVFEPAPEVLPPVIDQPTTVEAPQVNL--PTPGSIEDFAYQAGGEPRVFFGYDQFDLSPEARDVLRRQANWLSIYTDATAVIEGHADERGTREYNLALGARRADSVKSFLVSQGVSPNRLKTISYGKERPIDARSTESGWARNRNGFTSLRL 188

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: UPI0004091623 (peptidoglycan-associated lipoprotein Pal n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0004091623)

HSP 1 Score: 191 bits (486), Expect = 7.050e-59
Identity = 105/190 (55.26%), Postives = 123/190 (64.74%), Query Frame = 0

Query:    5 ALLILSACATQPD-------PVAELPPPXXXXXXXXXXXXXXXXXXXXXXXXXQVVQPGSGFIP--PIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLG 185
            A+L LSACAT+P        PV E PP                            V  G  F P  P+PGS+ DFA+Q GGEPR++FGY++YDL+ EA + LRRQA WL  Y    A+IEGNADERGTREYNLALGARRA++V+ FLVSQGVSP+RL T+SYGKERPIDG  N  GWARNRNG TN+  G
Sbjct:   11 AVLALSACATKPKIEPVQERPVVEAPPQIFEDTKPTPAPVVQLPP----------VDQGPVFDPNAPVPGSIADFAYQVGGEPRIYFGYDRYDLTNEAREALRRQAQWLQAYGQVNAIIEGNADERGTREYNLALGARRADTVKAFLVSQGVSPSRLTTVSYGKERPIDGASNEAGWARNRNGHTNITTG 190

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: A0A420WL91_9PROT (Peptidoglycan-associated protein n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WL91_9PROT)

HSP 1 Score: 191 bits (485), Expect = 8.520e-59
Identity = 91/127 (71.65%), Postives = 107/127 (84.25%), Query Frame = 0

Query:   62 PIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS 188
            P+PGS+EDFA+QSGGEPRV+FGY+Q+ LS EA + L  QANWL  Y +A A+IEG+ADERGTREYNLALGARRAE+V+ FLV QGV+  RL T+SYGKERPIDGR N  GWARNRNGFTN+ +GG S
Sbjct:   62 PVPGSVEDFAYQSGGEPRVYFGYDQFTLSQEARNSLLAQANWLMTYTNANAIIEGHADERGTREYNLALGARRAEAVKAFLVGQGVASGRLTTVSYGKERPIDGRSNEAGWARNRNGFTNITVGGIS 188

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: A0A8J3CKN8_9PROT (Peptidoglycan-associated lipoprotein n=2 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CKN8_9PROT)

HSP 1 Score: 184 bits (468), Expect = 9.930e-57
Identity = 86/127 (67.72%), Postives = 104/127 (81.89%), Query Frame = 0

Query:   62 PIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS 188
            P PGSLEDFA+ +GG+ R++F Y+Q+ LS +A   LR+QA WLN Y   TAV+EG+ADERGTR+YN+ALGARRA SV+ FLVSQGV P+RL T+SYGKERPIDGR N +GWARNRNG+TNLR  G S
Sbjct:   25 PFPGSLEDFAYSTGGDARIYFSYDQFTLSADARQTLRQQAEWLNRYNSYTAVVEGHADERGTRQYNIALGARRANSVKAFLVSQGVEPSRLTTVSYGKERPIDGRSNEEGWARNRNGYTNLRPVGQS 151

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: A0A848V2D8_9PROT (Peptidoglycan-associated protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V2D8_9PROT)

HSP 1 Score: 176 bits (447), Expect = 5.080e-53
Identity = 87/124 (70.16%), Postives = 99/124 (79.84%), Query Frame = 0

Query:   62 PIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLG 185
            P+PGSL+DF F SGG+ RVFF  +++DLS  A + L+RQA WL  YQ  TAVIEGNADERGTREYNLAL ARRAESV+ FLVS GVSP+RL T+SYGKERPID R N +GWARNRN  TNL  G
Sbjct:   63 PLPGSLDDFHFVSGGQGRVFFALDKHDLSSGARESLKRQAQWLQTYQGVTAVIEGNADERGTREYNLALAARRAESVKSFLVSLGVSPSRLTTVSYGKERPIDPRSNEEGWARNRNAHTNLMSG 186

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: A0A2G2IZC2_9PROT (Peptidoglycan-associated protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2IZC2_9PROT)

HSP 1 Score: 170 bits (431), Expect = 1.230e-50
Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 0

Query:   62 PIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS 188
            P+PG+++DF + S GE R++F YNQYDL P A DVLRRQA WLN+Y  A  ++ GNADERGTREYNLALGARRA++V+ FLVSQGV+P R+ T+SYGKERPIDG  N   WA NRN  +++ +GG+S
Sbjct:   61 PLPGTVDDFKYTS-GEDRIYFAYNQYDLVPVARDVLRRQAQWLNMYPSAILIVGGNADERGTREYNLALGARRADAVKAFLVSQGVAPGRITTVSYGKERPIDGGSNEAAWALNRNAHSSVLIGGNS 186

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: A0A7C5R0E1_9PROT (Peptidoglycan-associated protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5R0E1_9PROT)

HSP 1 Score: 162 bits (411), Expect = 1.390e-47
Identity = 90/183 (49.18%), Postives = 113/183 (61.75%), Query Frame = 0

Query:    6 LLILSACATQPDPVAELPPPXXXXXXXXXXXXXXXXXXXXXXXXXQVVQPGSGFIPPIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS 188
            +L L ACAT+P PV  +  P                           V  G     P PG++ DF + S G+ RV+FG+++YDL+P+A + LRRQA WLN Y  A  VI GNADERGTREYNLALGARRAES + FLVS+GV+P R+ T+SYGKERPID   N   WARNRN  + + +GG+S
Sbjct:   12 MLALGACATKPKPVEVVEQPAQTQPAPEVFQPAPVEPVEQVPNAPINVYNG-----PTPGTVADFKY-SAGDDRVYFGFDRYDLTPQARETLRRQAEWLNRYPTAIVVIGGNADERGTREYNLALGARRAESTKAFLVSKGVNPGRITTVSYGKERPIDPGSNEAAWARNRNAHSAVMVGGNS 188

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: A0A2G2N0S8_9PROT (Peptidoglycan-associated protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2N0S8_9PROT)

HSP 1 Score: 162 bits (409), Expect = 2.800e-47
Identity = 88/183 (48.09%), Postives = 110/183 (60.11%), Query Frame = 0

Query:    6 LLILSACATQPDPVAELPPPXXXXXXXXXXXXXXXXXXXXXXXXXQVVQPGSGFIPPIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS 188
            +L LSAC + PDP                                 V+ PG     P PG+ E F + S G+ RV+F YN+YDL+P A +VLR QANWL  Y  A  V+ GNADERGTREYNLALGARRA++V+ F VSQG+ P R+ T+SYGKERPIDGR N + WA NRN  + + +GG+S
Sbjct:   12 VLTLSACVSTPDPAPVKQQVQTQAPIFEPEPEAPEAPEIIEVPVEAVIPPG-----PQPGTSEHFKYTS-GDDRVYFDYNKYDLTPRAREVLRSQANWLERYDGAIIVVGGNADERGTREYNLALGARRADAVKAFFVSQGIEPGRITTVSYGKERPIDGRSNEEAWAINRNAHSAVLVGGTS 188

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: UPI00036EAF9E (OmpA family protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI00036EAF9E)

HSP 1 Score: 159 bits (401), Expect = 4.960e-46
Identity = 78/127 (61.42%), Postives = 97/127 (76.38%), Query Frame = 0

Query:   62 PIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS 188
            PIPGS++DF  ++G   RVFFGY+Q  LSP+A+ VLR QA+WL  Y  A  +I G+ADERGTREYNLALGARRAE+V+ FLV Q ++PNR+ T+SYGKERPIDGR   + WA NRNG T +  G +S
Sbjct:   67 PIPGSIQDFVERAGD--RVFFGYDQDTLSPQAMQVLRAQASWLQNYPGAVIIIGGHADERGTREYNLALGARRAEAVKSFLVGQSIAPNRMSTVSYGKERPIDGRSTEEAWALNRNGHTAIVSGTNS 191

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BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Match: A0A520XF70_9ACTN (Peptidoglycan-associated protein n=2 Tax=Bacteria TaxID=2 RepID=A0A520XF70_9ACTN)

HSP 1 Score: 157 bits (396), Expect = 2.750e-45
Identity = 93/195 (47.69%), Postives = 120/195 (61.54%), Query Frame = 0

Query:    3 GAALLILSACATQPD--------PVA-ELPPPXXXXXXXXXXXXXXXXXXXXXXXXXQVVQPGSGFIPPIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPNRLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS 188
            G+  L LSACA+ P+        PV  ELPPP                          VVQ    +  P PG+ E F + S G+ RV+FGY++YDLS +A DVLR+Q+ WLN Y  A  V+ GN DERGTREYNLALGARRA++V+ FLVSQGV+P+R+ T+SYGKERPI G  N   WA NRN  +++ +GG++
Sbjct:    9 GSIALTLSACASTPEVEEVVETEPVQQELPPPVVEPAPEPVVQAPP------------VVQ--EVYTGPPPGTAEHFKYVS-GDDRVYFGYDRYDLSSQARDVLRKQSEWLNQYGQAIVVVGGNCDERGTREYNLALGARRADAVKAFLVSQGVNPSRITTVSYGKERPIAGESNEAAWALNRNAHSSVMVGGNT 188

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig101159.204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI00167C3CC2	2.550e-73	65.95	peptidoglycan-associated lipoprotein Pal n=1 Tax=L...	[more]
UPI0004091623	7.050e-59	55.26	peptidoglycan-associated lipoprotein Pal n=1 Tax=H...	[more]
A0A420WL91_9PROT	8.520e-59	71.65	Peptidoglycan-associated protein n=1 Tax=Litorimon...	[more]
A0A8J3CKN8_9PROT	9.930e-57	67.72	Peptidoglycan-associated lipoprotein n=2 Tax=Algim...	[more]
A0A848V2D8_9PROT	5.080e-53	70.16	Peptidoglycan-associated protein n=1 Tax=Hellea sp...	[more]
A0A2G2IZC2_9PROT	1.230e-50	62.99	Peptidoglycan-associated protein n=1 Tax=Robiginit...	[more]
A0A7C5R0E1_9PROT	1.390e-47	49.18	Peptidoglycan-associated protein n=1 Tax=Hellea ba...	[more]
A0A2G2N0S8_9PROT	2.800e-47	48.09	Peptidoglycan-associated protein n=1 Tax=Robiginit...	[more]
UPI00036EAF9E	4.960e-46	61.42	OmpA family protein n=1 Tax=Robiginitomaculum anta...	[more]
A0A520XF70_9ACTN	2.750e-45	47.69	Peptidoglycan-associated protein n=2 Tax=Bacteria ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006664	Outer membrane protein, bacterial	PRINTS	PR01021	OMPADOMAIN	coord: 82..104 score: 26.94 coord: 127..143 score: 51.08 coord: 112..127 score: 46.49
IPR006665	OmpA-like domain	PFAM	PF00691	OmpA	coord: 81..176 e-value: 2.2E-19 score: 69.6
IPR006665	OmpA-like domain	PROSITE	PS51123	OMPA_2	coord: 68..186 score: 36.202
IPR036737	OmpA-like domain superfamily	GENE3D	3.30.1330.60		coord: 68..178 e-value: 1.8E-30 score: 107.7
IPR036737	OmpA-like domain superfamily	SUPERFAMILY	103088	OmpA-like	coord: 78..176
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 63..176
None	No IPR available	PANTHER	PTHR30128:SF34	PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN	coord: 63..176
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..188
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.477
IPR006690	Outer membrane protein, OmpA-like, conserved site	PROSITE	PS01068	OMPA_1	coord: 114..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig101159	contig	P-canaliculata_contig101159:426..992 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig101159.204.1	mRNA_P-canaliculata_contig101159.204.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig101159 420..992 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig101159.204.1 ID=prot_P-canaliculata_contig101159.204.1|Name=mRNA_P-canaliculata_contig101159.204.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=189bp
MAGAALLILSACATQPDPVAELPPPAPVTQAPPPQVFQPAPPPAVVQQAP
QVVQPGSGFIPPIPGSLEDFAFQSGGEPRVFFGYNQYDLSPEALDVLRRQ
ANWLNIYQDATAVIEGNADERGTREYNLALGARRAESVQDFLVSQGVSPN
RLRTISYGKERPIDGRPNADGWARNRNGFTNLRLGGSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006664	OMP_bac
IPR006665	OmpA-like
IPR036737	OmpA-like_sf
IPR006690	OMPA-like_CS