prot_P-canaliculata_contig101018.189.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101018.189.1
Unique Nameprot_P-canaliculata_contig101018.189.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length320
Homology
BLAST of mRNA_P-canaliculata_contig101018.189.1 vs. uniprot
Match: A0A2D5ATM3_9BACT (Cytochrome c domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5ATM3_9BACT)

HSP 1 Score: 165 bits (417), Expect = 7.310e-42
Identity = 125/341 (36.66%), Postives = 165/341 (48.39%), Query Frame = 0
Query:    1 PNKVWPTVTDPVAISFYGGHIYVLGQGTHALAKQDAADGRIVQVFAPGATNYLKGAFSEPADLVIDSSSGQAFVSCMGSDSVFQIDLSGSMTEVRRWRTGLGAFPGEHITHGGADEYSLGVKRPRFL-------SLHGGNLYVAPFLSGNNTL-TFMEGDSPSGSGHKGTDIINGHASQDSFGGALAITGLRNDGMPDADLICIDLDQPASTQISTVIRRAGSMLTAHGFHPTSDEVWMLGMYSKNLDEN--TEPDFKGDFARNTLVVRPLA----SGAPPVTIDPSSGTIDLDQ-----PG--YSESKSLPLPYALEFGGPNGLTAIASSTLSRISLRDS 320
            P + W TV++PV+I+ Y   + V+GQG HALA+ D  DG I+ + A           SEPAD+V+D+ + +A+VSCMG D V QIDLS  M   + W    G                L +KRPRFL       S     +YVAP +SGNNT+  F  G  P        DI++G             T L   G+PD DL  I        Q+  VIR AGS+L  HG +P + + WM+G+   NL+    +EP  +G FA N L +   A     G+PP   D     IDLD      PG  Y   +S+  PYAL F    G  AIA+ST   + L DS
Sbjct:  101 PTQRWRTVSNPVSIAAYAEDLLVVGQGNHALARHDLPDGEIIDLLALP---------SEPADIVVDTDNDEAWVSCMGDDCVVQIDLSSPMRIKKIWSWDEG----------------LELKRPRFLFFDPQTPSPDDNLVYVAPMVSGNNTIFKFNTGPGP--------DIVDG-------------TSLPAGGLPDEDLFRIST---GPDQVEPVIRAAGSLLFGHGKNPVTGDYWMVGLDHLNLEPGMLSEPTVRGKFAMNQLAITSAALFSAGGSPPPEPD---SMIDLDDYDVAAPGAQYQSDRSVSFPYALAFEPGTGRAAIAASTSPLVVLTDS 389          
BLAST of mRNA_P-canaliculata_contig101018.189.1 vs. uniprot
Match: A0A7C5J2T7_9DELT (Cytochrome c domain-containing protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7C5J2T7_9DELT)

HSP 1 Score: 128 bits (321), Expect = 3.790e-29
Identity = 102/322 (31.68%), Postives = 156/322 (48.45%), Query Frame = 0
Query:    5 WPTVTDPVAISFYGGHIYVLGQGTHALAKQDAADGRIVQVFAPGATNYLKGAFSEPADLVIDSSSGQAFVSCMGSDSVFQIDLSGSMTEVRRWRTGLGAFPGEHITHGGADEYSLGVKRPRFLSLHG-----GNLYVAPFLSGNNTLTFMEGDSPSGSGHKGTDIINGHASQDSFGGALAITGLRNDGMPDADLICIDLDQPASTQISTVIRRAGSMLTAHGFHPTSDEVWMLGMYSKNLDENTEPDFKGDFARNTLVVRPLASGAPPVTIDPSSGTIDLDQP----GYSESKSLPLPYALEFGGPNGLTAIASSTLSRISL 317
            WPT+ +PVAI+ +   + V+G  + +LA+ D   GRI +  A  A         EPAD+V+D+   +A+V+C G D V +IDL+ + TE  R                    Y++  +RPRFL L         +YVAPFLSGNNT T     +P       + +++           L   G+    +PD DL  ID  QPA + ++ V+  AG+++  HG +P + + W++   S N  +++E   +G FA+  L +  ++SG+ PV     +  IDLD P              P+AL F    G  AIASST   I+L
Sbjct:   91 WPTLHNPVAITEWRDSLLVVGGSSWSLAEHDRTTGRITRQVALAA---------EPADIVVDAIRDEAYVACQGDDVVVRIDLT-TFTENAR--------------------YAIPAERPRFLFLDELAVPTPLVYVAPFLSGNNT-TLARSPAP----EPRSTVLD-----------LKAPGIGWTSLPDEDLFVIDPTQPAGSAVTPVLHEAGTLIAEHGRNPATSDYWVISTESLNAAQHSEDKHRGRFAKAQLTIG-ISSGSRPVP----ATVIDLDVPIGXXXXXXXXXXSFPFALAFHS-TGYAAIASSTGDLITL 360          
BLAST of mRNA_P-canaliculata_contig101018.189.1 vs. uniprot
Match: A0A2D5AW94_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AW94_9BACT)

HSP 1 Score: 116 bits (290), Expect = 4.520e-25
Identity = 100/334 (29.94%), Postives = 150/334 (44.91%), Query Frame = 0
Query:    1 PNKVWPTVTDPVAISFYGGHIYVLGQGTHALAKQDAADGRIVQVFAPGATNYLKGAFSEPADLVIDSSSGQAFVSCMGSDSVFQIDLSGSMTEVRRWRTGLGAFPGEHITHGGADEYSLGVKRPRFLSLHGGNLYVAPFLSGNNTLTFMEGDSPSGSGHKGTDIINGHASQDSFGGALAITGLRNDGMPDADLICIDLDQPASTQISTVIRRAGSMLTAHGFHPTSDEVWML--GMYSKNLDENTEPDFKGDFARNTLVV-RPLASGAPPVTIDPSSGTIDLDQPG-------YSESKSLPLPYALEFGGPN-----GLTAIASSTLSRISLRD 319
            P   WPT+ +PV++  +G  + VLG  TH+LA  D   G ++        + L    SEP DL++D ++G A++S    + V  +DL+ +   V   R  +   PGE       D + + ++R          L VAP LSGNNT            G  G +     A+    G  + ++G  N G+PD DL+ + L   AS  +    R AG+++  H  +P ++E W L   +++    +  E + +G FA N L +  P A G P    D     IDLD          YS   S+  PYAL F  P      G   IASST   ++L D
Sbjct:   89 PEASWPTLNNPVSMDVWGDRVVVLGGATHSLAIHDRFTGEVL------GHHELP---SEPGDLIMDETTGIAYISSQAENLVIALDLNNTNNIVELERHEI---PGEQPRFMYLDTHPISLERV---------LVVAPMLSGNNTAPLP--------GAIGVEFTREQAT----GEIVNVSGFANGGLPDEDLLVLPLVGGASPPVLPSGREAGTLMLEHARNPLTNEYWALTVDLHNDLPGQRGEDELRGIFASNNLAIFAPSALGVPR---DLPDRIIDLDDNDPSTAGAQYSSETSVSFPYALAFVPPTNDALAGWAGIASSTGDLVALLD 386          
BLAST of mRNA_P-canaliculata_contig101018.189.1 vs. uniprot
Match: A0A521KRH2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KRH2_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 3.910e-11
Identity = 92/342 (26.90%), Postives = 149/342 (43.57%), Query Frame = 0
Query:   10 DPVAISFYGG--------HIYVLGQGTHALAKQDAADGRIVQVF------APGATNYLK-GAFSEPADLVIDSS--SGQ---AFVSCMGSDSVFQIDL-SGSMTEVRRWRTGLGAFPGEHITHGGADEYSLGVKRPRFLSLHGGNL------YVAPFLSGNNTLTFMEGDSPSGSGHKGTDIINGHASQDSFGGALAITGLRNDG--MPDADLICIDLDQPASTQ--ISTVIRRAGSMLTAHGFHPTS-----DEVWMLGMYSKNLDENT--EPDFKGDFARN--TLVVRPLASGAPPVTIDPSSGTIDLDQPGYSESK--------SLPLPYALEFGGPNG 303
            DPV+++++ G         + V+ Q + A+A+ DA  G +  V        P A   ++ G+ +EPAD+++D +  SG+   AFVSC+G +SV QIDL +G +  V R    LG             +    +K P FLS     L       VAP  SGN++  ++ G +                      G +++T L   G  +PDADL  I     A+    +  V R  G++L AHG +P        E+W L   ++N       EP   G F+ N  T +  PLA+    +  + ++ +I LD P  + +         ++  PY++ F    G
Sbjct:   90 DPVSVAYWDGATSAPEDDEVLVVCQASWAIARVDATSGEMKSVIQLRESDGPIAGRPVRMGSMAEPADILVDDAPPSGENDRAFVSCIGGNSVLQIDLVTGQVVRVFREDRALGL------------DTEFQIKSPLFLSFEPAALGEARRVLVAPLQSGNSS-AWLGGTT----------------------GGVSVTDLVAAGSPLPDADLFRITPVSAATPNGLVEVVARATGTLLFAHGVNPLPTTAGHQELWQLNSDAQNKTTGLQGEPAIAGKFSFNRITRLRLPLAANGAGIP-NANATSISLDPPAMTGASGGSITTQTTVGQPYSIAFNSSYG 395          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101018.189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2D5ATM3_9BACT7.310e-4236.66Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A7C5J2T7_9DELT3.790e-2931.68Cytochrome c domain-containing protein n=1 Tax=Pol... [more]
A0A2D5AW94_9BACT4.520e-2529.94Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A521KRH2_9BACT3.910e-1126.90Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..156
e-value: 3.4E-6
score: 28.5
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 9..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101018contigP-canaliculata_contig101018:3..962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101018.189.1mRNA_P-canaliculata_contig101018.189.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101018 3..962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101018.189.1 ID=prot_P-canaliculata_contig101018.189.1|Name=mRNA_P-canaliculata_contig101018.189.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=320bp
PNKVWPTVTDPVAISFYGGHIYVLGQGTHALAKQDAADGRIVQVFAPGAT
NYLKGAFSEPADLVIDSSSGQAFVSCMGSDSVFQIDLSGSMTEVRRWRTG
LGAFPGEHITHGGADEYSLGVKRPRFLSLHGGNLYVAPFLSGNNTLTFME
GDSPSGSGHKGTDIINGHASQDSFGGALAITGLRNDGMPDADLICIDLDQ
PASTQISTVIRRAGSMLTAHGFHPTSDEVWMLGMYSKNLDENTEPDFKGD
FARNTLVVRPLASGAPPVTIDPSSGTIDLDQPGYSESKSLPLPYALEFGG
PNGLTAIASSTLSRISLRDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf