prot_P-canaliculata_contig10093.175.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10093.175.1
Unique Nameprot_P-canaliculata_contig10093.175.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length551
Homology
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BLAST of mRNA_P-canaliculata_contig10093.175.1 vs. uniprot
Match: D7FQ85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ85_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 6.780e-29
Identity = 79/174 (45.40%), Postives = 116/174 (66.67%), Query Frame = 0 
Query:  264 EHSKRTEQAKRLALEVARLRSSLRGSNYDLAVERKARRRLENDHREKVLAWENEREAIVSARHDAERALRTAQEELKEMRKQDEARCAKAKSEAAIGEASHRKAASALNGVIEVQDRLVRALRTEVDLIKRAKVVAQGDAREAGERLGLFVQGFQMWRDRAMLLEARMAELDHP 437
            EH K  +QAKRLALEVARLRSSLR +  +L  ER  R RLE++   ++  WE ER  +V+++ +AER  RTA+E++  +  +++ R  +  SE    E    KA  A+NGV++VQDRL++ALRTE+++  RA+  AQ +A EA ++L L+V  F +WR+RA  LE  + +L HP
Sbjct:  343 EHQKTRDQAKRLALEVARLRSSLRTTTSELNTERSTRVRLEDEWWRRMQEWEEERGRLVASKQEAERTARTAEEDVARLLVKEKDREGEVASERLARETRQEKADIAMNGVVKVQDRLIQALRTELEMTDRARQAAQDNALEAKDQLRLYVDDFLLWRNRAKHLEGLLIDLGHP 516
[Close]
BLAST of mRNA_P-canaliculata_contig10093.175.1 vs. uniprot
Match: A0A6H5KFY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY5_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 7.100e-27
Identity = 78/181 (43.09%), Postives = 116/181 (64.09%), Query Frame = 0 
Query:  256 EGVKNAIEEHSKRTEQAKRLALEVARLRSSLRGSNYDLAVERKARRRLENDHREKVLAWENEREAIVSARHDAERALRTAQEELKEMRKQDEARCAKAKSEAAIGEASHRKAASALNGVIEVQDRLVRALRTEVDLIKRAKVVAQGDAREAGERLGLFVQGFQMWRDRAMLLEARMAELDH 436
            +G +    EH    +QAKRLALEVARLRSSLR +  +L  ER  R RLE++   ++  WE +   +V+++ +AERA RTA+E++  +  +++ R  +  SE    E+   KA  A+ GV+ VQDRL++ALRTE++L   A+  AQ +A EA ++L L+V  F +WR+RA  LEA + EL H
Sbjct:  324 QGDETRASEHQNTRDQAKRLALEVARLRSSLRATTSELNTERSTRVRLEDEWWRRMQEWEEKHGCLVASKQEAERAARTAEEDMARLLVKEKNREEEVASERLAQESRQEKADIAMKGVVTVQDRLIQALRTELELTDSARRAAQDNALEAKDQLRLYVNDFLLWRNRAKHLEALLIELGH 504
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10093.175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ85_ECTSI6.780e-2945.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFY5_9PHAE7.100e-2743.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 325..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10093contigP-canaliculata_contig10093:1162..4240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10093.175.1mRNA_P-canaliculata_contig10093.175.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10093 1154..4240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10093.175.1 ID=prot_P-canaliculata_contig10093.175.1|Name=mRNA_P-canaliculata_contig10093.175.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=551bp
MTALALVPLCDHVPDWQPGKATRLERSSDDGELEGHIPYSSTGWVPDVQA
RSDGGSSEKKDDVNKMDCGRGRPTKKEDGSLRGTRTKPNQSVCSDGGAPH
RQEHRVPCLSNDSPGAPSDGGYELEKKPTPLSSAEELSTSIDEDHGEKRL
NGMADVGRAKNLCRSKRHHKNSVPVLREGGNTGSLSTGYDSDIKAEKSKS
KSSPRTSASRVMALVKETIDTSLEAAAECLPSVTEEPVHRRCKTVDRRGD
RECHTEGVKNAIEEHSKRTEQAKRLALEVARLRSSLRGSNYDLAVERKAR
RRLENDHREKVLAWENEREAIVSARHDAERALRTAQEELKEMRKQDEARC
AKAKSEAAIGEASHRKAASALNGVIEVQDRLVRALRTEVDLIKRAKVVAQ
GDAREAGERLGLFVQGFQMWRDRAMLLEARMAELDHPQRQPNDYVDPGHS
QNRPIQSALSGQNYVSMAKQAKGGERSLSMGRIVKWNDVECPESNRLVEL
DGEHARGSDDQDSSLGGGKCQRGMEGGRRCSLRDAVEALQDSDMVRRSDL
A
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