prot_P-canaliculata_contig1009.165.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig1009.165.1
Unique Nameprot_P-canaliculata_contig1009.165.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length160
Homology
BLAST of mRNA_P-canaliculata_contig1009.165.1 vs. uniprot
Match: D7G0G0_ECTSI (ILEI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G0_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 7.710e-45
Identity = 94/152 (61.84%), Postives = 110/152 (72.37%), Query Frame = 0
Query:   16 VARVRAMLASASPAHRLKGLEGA-----EGAALSRES--ESTAFRAKRDAALLLGYLDRLCEPYGPPQETMADSRVRYELEAASGGSEDGNFSRLLVRGHDWSSKEPGVNVLVLTEMLDAGGQMAKGFDIRESLDATNRLADYINAVAQGRT 160
            +A  R ML S+SP HR++GLE A      G A S E   +     A+  AALLLGYL+RL EPYGPP+E +A+ RVR ELEAASGG +DGNFSRLLVRG D S KEPG+NVLVLTE LDAGGQ+A  F   ES+ A+NRLADY+N V QGRT
Sbjct: 1397 MAWARIMLGSSSPCHRVEGLEEAGLLDLHGPAGSGEEGGDKAVLCARGHAALLLGYLERLGEPYGPPEEDVAEPRVRCELEAASGGKDDGNFSRLLVRGEDRSCKEPGMNVLVLTETLDAGGQVATTFATHESVHASNRLADYLNNVPQGRT 1548          
BLAST of mRNA_P-canaliculata_contig1009.165.1 vs. uniprot
Match: A0A6H5K114_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K114_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 9.240e-44
Identity = 93/152 (61.18%), Postives = 109/152 (71.71%), Query Frame = 0
Query:   16 VARVRAMLASASPAHRLKGLEGA-----EGAALSRES--ESTAFRAKRDAALLLGYLDRLCEPYGPPQETMADSRVRYELEAASGGSEDGNFSRLLVRGHDWSSKEPGVNVLVLTEMLDAGGQMAKGFDIRESLDATNRLADYINAVAQGRT 160
            +A  R ML S+SP+HR++GLE A      G A S E   +     A+  AALLLGYL+RL EPYGPP+E +A+ RVR ELEAASGG +DGNFSRLLVRG D S KEPG+NVLVLTE LDAGGQ A  F   +S  A+NRLADY+N V QGRT
Sbjct: 1171 MAWARIMLGSSSPSHRVEGLEEAGLLDLHGPAGSGEEGGDKAVLCARGHAALLLGYLERLGEPYGPPEEDVAEPRVRCELEAASGGKDDGNFSRLLVRGEDRSCKEPGMNVLVLTETLDAGGQAATTFATHQSEHASNRLADYLNNVPQGRT 1322          
BLAST of mRNA_P-canaliculata_contig1009.165.1 vs. uniprot
Match: A0A835Z6H0_9STRA (ILEI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.140e-15
Identity = 59/145 (40.69%), Postives = 78/145 (53.79%), Query Frame = 0
Query:   17 ARVRAMLASASPAHRLKGLEGAEGAALSRESESTAFRAKRDAALLLGYLDRLCEPYGPPQETMADSRVRYELEAASGGSED---GNFSRLLVRGHDWSSKEPGVNVLVLTEMLDAGGQMAKGFDIRESLDATNRLADYINAVAQG 158
            A++ AM ASASP HR   L  A  AA             R+AALLL  L+RL EP+GPP     +  V  ELEA   G  +   G  +RLLVRG D   +E GVN++VL     A     K F   ES  A++R++D+++A+A G
Sbjct: 1220 AQLEAMAASASPVHRGLALRAAHSAAADGXXXXXXXXL-REAALLLCELERLAEPFGPPALEPCEPHVGAELEACGIGFRENMAGALARLLVRGQDHCPREIGVNMVVLDARACAV-LARKAFGTHESGAASDRMSDFVDAIAPG 1362          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1009.165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0G0_ECTSI7.710e-4561.84ILEI domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K114_9PHAE9.240e-4461.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6H0_9STRA2.140e-1540.69ILEI domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1009contigP-canaliculata_contig1009:1096..2782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1009.165.1mRNA_P-canaliculata_contig1009.165.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig1009 1094..2782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig1009.165.1 ID=prot_P-canaliculata_contig1009.165.1|Name=mRNA_P-canaliculata_contig1009.165.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=160bp
FAPPPPPQTPPGHSPVARVRAMLASASPAHRLKGLEGAEGAALSRESEST
AFRAKRDAALLLGYLDRLCEPYGPPQETMADSRVRYELEAASGGSEDGNF
SRLLVRGHDWSSKEPGVNVLVLTEMLDAGGQMAKGFDIRESLDATNRLAD
YINAVAQGRT
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