prot_P-canaliculata_contig100797.154.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100797.154.1
Unique Nameprot_P-canaliculata_contig100797.154.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length67
Homology
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BLAST of mRNA_P-canaliculata_contig100797.154.1 vs. uniprot
Match: A0A6H5KWX2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX2_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.680e-19
Identity = 46/64 (71.88%), Postives = 52/64 (81.25%), Query Frame = 0 
Query:    4 LGGTGAATTVIFDPVANGKSVLAVAAVQDPRVIEWYPGGVIWLRAGRAAIGRLLRMIELAIHQV 67
            +G  G ATTVIFD VANGKSVLA AA+QDPRV   +PGGVIWLRAG +A  RLLRM+ELA+ QV
Sbjct:   15 MGVIGGATTVIFDSVANGKSVLAAAAMQDPRVQAAFPGGVIWLRAGHSADDRLLRMMELAVCQV 78
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100797.154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWX2_9PHAE1.680e-1971.88NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100797contigP-canaliculata_contig100797:99..493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100797.154.1mRNA_P-canaliculata_contig100797.154.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100797 99..493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100797.154.1 ID=prot_P-canaliculata_contig100797.154.1|Name=mRNA_P-canaliculata_contig100797.154.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=67bp
DLELGGTGAATTVIFDPVANGKSVLAVAAVQDPRVIEWYPGGVIWLRAGR
AAIGRLLRMIELAIHQV
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