mRNA_P-canaliculata_contig100797.154.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig100797.154.1 vs. uniprot
Match: A0A6H5KWX2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX2_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 1.680e-19 Identity = 46/64 (71.88%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 10 LGGTGAATTVIFDPVANGKSVLAVAAVQDPRVIEWYPGGVIWLRAGRAAIGRLLRMIELAIHQV 201
+G G ATTVIFD VANGKSVLA AA+QDPRV +PGGVIWLRAG +A RLLRM+ELA+ QV
Sbjct: 15 MGVIGGATTVIFDSVANGKSVLAAAAMQDPRVQAAFPGGVIWLRAGHSADDRLLRMMELAVCQV 78 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100797.154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100797.154.1 >prot_P-canaliculata_contig100797.154.1 ID=prot_P-canaliculata_contig100797.154.1|Name=mRNA_P-canaliculata_contig100797.154.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=67bp DLELGGTGAATTVIFDPVANGKSVLAVAAVQDPRVIEWYPGGVIWLRAGRback to top mRNA from alignment at P-canaliculata_contig100797:99..493- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig100797.154.1 ID=mRNA_P-canaliculata_contig100797.154.1|Name=mRNA_P-canaliculata_contig100797.154.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=395bp|location=Sequence derived from alignment at P-canaliculata_contig100797:99..493- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100797:99..493- >mRNA_P-canaliculata_contig100797.154.1 ID=mRNA_P-canaliculata_contig100797.154.1|Name=mRNA_P-canaliculata_contig100797.154.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=402bp|location=Sequence derived from alignment at P-canaliculata_contig100797:99..493- (Pelvetia canaliculata dioecious)back to top |