prot_P-canaliculata_contig100789.153.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100789.153.1
Unique Nameprot_P-canaliculata_contig100789.153.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length92
Homology
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 8.810e-24
Identity = 46/85 (54.12%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQREDPSPRFR 85
            +AP+ S+WDAW++R+GH ++FV++Y+ALLLKVDVSGE   SQ+ + +V+VA H CMILAV+ E  ++T  LK   QR++P+ RFR
Sbjct: 1166 LAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKV-EQRQEPTTRFR 1249          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.270e-23
Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQREDPSPRF 84
            +APY S+WD W+SR GHA++FV++YVALLLKVDVS E   SQ+ F VV+VA H CMIL +V+E +++T  L  G +R+ P+ RF
Sbjct: 1977 LAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVG-ERDGPALRF 2059          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.980e-22
Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    3 PYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQREDPSPRF 84
            PY S+WDAW SR GH ++ V++YVALLLKVDVS E  SSQ+ F  ++VA H CM+  VVVE II+++ L+  ++RE P PR 
Sbjct: 1118 PYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPRL 1199          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 8.220e-21
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQREDPSPR 83
            + PY   WD W+SR  HA++F+++YVALLLKVDVS E  SSQK F  V+VA H CMILAVVVE I++    +  +++++P+PR
Sbjct:  927 LRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRV-KEQDEPAPR 1008          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 8.400e-21
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQREDPSPR 83
            + PY   WD W+SR  HA++F+++YVALLLKVDVS E  SSQK F  V+VA H CMILAVVVE I++    +  +++++P+PR
Sbjct: 2665 LRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRV-KEQDEPAPR 2746          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: A0A6H5KP34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP34_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 9.180e-21
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    3 PYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQREDPSPR 83
            P    WD W+SR  HA++F+++YVALLLKVDVS E  SSQK F  V+VA H CM+LAVVVE I++    +   Q E P+PR
Sbjct:   68 PNAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSDEKRSSQKVFEAVLVAAHACMVLAVVVETIVLGCPSRVKEQHE-PAPR 147          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 2.050e-20
Identity = 40/73 (54.79%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKG 73
            ++PY S+WD W++R GH ++FV+++VALLLKVDV+ E  SSQK F  V+VA H CM+L VV+E I++T  L+G
Sbjct:  608 LSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAIVLTSSLRG 680          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 2.550e-19
Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQR-EDPSPRFR 85
            +APY S+WD WISR GH ++F+++YVALLLKVDVS E  SSQ+ F  V+VA H CMIL V+VE  +    L+  R+     SPRFR
Sbjct: 1422 LAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFR 1507          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.250e-18
Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQREDPSPRFRR 86
            ++PY S+W+ W++R GH ++ V++YVALLLKVDVS E   SQ  F  V+V  H CMIL+VVVE  ++  L +  + RED   RFRR
Sbjct: 1396 VSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQ-KLREDVPARFRR 1480          
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.080e-18
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    1 MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIVAGHGCMILAVVVEGIIMTLLLKGGRQR-----EDPSPRFRRS 87
            +APY S+WD WI+R GH ++  ++Y+ALLLKVDVS E +SSQ  F  V+V  H  M++  V E +++ L L+  R+R     ED  PRFR S
Sbjct: 1522 LAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSS 1613          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100789.153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G301_ECTSI8.810e-2454.12Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G5Y7_ECTSI2.270e-2355.95Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FTL7_ECTSI1.980e-2254.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHH1_ECTSI8.220e-2153.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHG7_ECTSI8.400e-2153.01LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KP34_9PHAE9.180e-2154.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH65_ECTSI2.050e-2054.79Polymorphic outer membrane protein G/I family prot... [more]
A0A6H5K0E9_9PHAE2.550e-1954.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7Z1_9PHAE2.250e-1850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSC0_ECTSI3.080e-1846.74Polymorphic Outer membrane protein G/I family n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100789contigP-canaliculata_contig100789:117..392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100789.153.1mRNA_P-canaliculata_contig100789.153.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100789 2..710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100789.153.1 ID=prot_P-canaliculata_contig100789.153.1|Name=mRNA_P-canaliculata_contig100789.153.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=92bp
MAPYHSQWDAWISRSGHAIIFVTIYVALLLKVDVSGESNSSQKTFGVVIV
AGHGCMILAVVVEGIIMTLLLKGGRQREDPSPRFRRSSNNP*
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