prot_P-canaliculata_contig100725.146.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100725.146.1
Unique Nameprot_P-canaliculata_contig100725.146.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length113
Homology
BLAST of mRNA_P-canaliculata_contig100725.146.1 vs. uniprot
Match: A0A518HN18_9BACT (Ankyrin repeat protein n=2 Tax=Stieleria neptunia TaxID=2527979 RepID=A0A518HN18_9BACT)

HSP 1 Score: 131 bits (330), Expect = 4.220e-36
Identity = 62/111 (55.86%), Postives = 78/111 (70.27%), Query Frame = 0
Query:    1 MNKTTTKRLFKAIQDDDAAALNAILGEHADAIEAIGEHNRNVRDKTPLMFALQCRNFDIANHLLDRGADASAEMADGPRSSVLGLCCNFAYFDSENHDQWITLAVRLLDQG 111
            M K   KR+FKAI+DDD   L+++L  + DAIE+ G HNR VRDKTPLM+ALQC N  +A HLLDRGA+ SA M DGPR SV+ +C   A+ +   HD+WI   +RLLD G
Sbjct:    4 MKKADIKRMFKAIEDDDQQTLDSLLNTNDDAIESHGFHNRLVRDKTPLMYALQCFNLKLAGHLLDRGANPSAVMPDGPRHSVIQMCIARAFCNKSTHDEWIAFTIRLLDAG 114          
BLAST of mRNA_P-canaliculata_contig100725.146.1 vs. uniprot
Match: A0A4R5HH35_9ALTE (Ankyrin repeat domain-containing protein n=1 Tax=Alteromonadaceae bacterium M269 TaxID=2546219 RepID=A0A4R5HH35_9ALTE)

HSP 1 Score: 115 bits (288), Expect = 2.540e-30
Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    1 MNKTTTKRLFKAIQDDDAAALNAILGEHADAIEAIGEHNRNVRDKTPLMFALQCRNFDIANHLLDRGADASAEMADGPRSSVLGLCCNFAYFDSENHDQWITLAVRLLDQGAN 113
            M KT TK+LF AIQ  D   + +I+ ++  AIE++G+HN   RDKTPLMFA+QC +F++A  L+D GA+  A+M DGP SSV+ L  +F +  + N D+WI L  RL++ GAN
Sbjct:    1 MTKTETKKLFVAIQKHDHETVFSIIEKNEGAIESVGQHNAYCRDKTPLMFAMQCEDFELAYKLMDIGANVRAKMLDGPESSVIQLAASFGHSLNPNFDKWIGLIQRLIENGAN 113          
BLAST of mRNA_P-canaliculata_contig100725.146.1 vs. uniprot
Match: UPI0016024DEC (hypothetical protein n=1 Tax=unclassified Pseudoalteromonas TaxID=194690 RepID=UPI0016024DEC)

HSP 1 Score: 107 bits (266), Expect = 5.170e-27
Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 0
Query:    1 MNKTTTKRLFKAIQDDDAAALNAILGEHADAIEAIGEHNRNVRDKTPLMFALQCRNFDIANHLLDRGADASAEMADGPRSSVLGLCCNFAYFDSENHDQWITLAVRLLDQGAN 113
            M K   K+LF AI+  D  ++  IL +    IE +G HN N RDKTPLM+A+QC +F++AN L++ GA+  A+M  GP +SV+ L   F +  + N D+W++   +L++QGAN
Sbjct:    1 MTKAEIKKLFVAIEKHDQDSVLGILAKDKGVIETVGHHNANCRDKTPLMYAMQCEDFELANKLIELGANVKAKMPAGPETSVIQLAVKFGHGLNPNFDKWLSFTQKLIEQGAN 113          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100725.146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A518HN18_9BACT4.220e-3655.86Ankyrin repeat protein n=2 Tax=Stieleria neptunia ... [more]
A0A4R5HH35_9ALTE2.540e-3048.67Ankyrin repeat domain-containing protein n=1 Tax=A... [more]
UPI0016024DEC5.170e-2742.48hypothetical protein n=1 Tax=unclassified Pseudoal... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..113
e-value: 8.0E-10
score: 40.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 10..74
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 43..75
score: 9.41
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 43..75
score: 9.431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100725contigP-canaliculata_contig100725:49..387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100725.146.1mRNA_P-canaliculata_contig100725.146.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100725 49..387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100725.146.1 ID=prot_P-canaliculata_contig100725.146.1|Name=mRNA_P-canaliculata_contig100725.146.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=113bp
MNKTTTKRLFKAIQDDDAAALNAILGEHADAIEAIGEHNRNVRDKTPLMF
ALQCRNFDIANHLLDRGADASAEMADGPRSSVLGLCCNFAYFDSENHDQW
ITLAVRLLDQGAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt