prot_P-canaliculata_contig100650.140.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100650.140.1
Unique Nameprot_P-canaliculata_contig100650.140.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length139
Homology
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A2H4FLP2_9FLOR (Photosystem I reaction center subunit II n=4 Tax=Solieriaceae TaxID=31441 RepID=A0A2H4FLP2_9FLOR)

HSP 1 Score: 268 bits (685), Expect = 8.220e-91
Identity = 128/138 (92.75%), Postives = 132/138 (95.65%), Query Frame = 0
Query:    1 MIDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            MIDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTS IEQ+FEMPTGGAAIMR+GDNLLYLAKKEQCLALS QLK KFKI DFKIYRIFP+GEVQYLHPKDGVFPEKANPGRKG+GNINHSIGKNDN VNKKFTGKA YE
Sbjct:    1 MIDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSKIEQFFEMPTGGAAIMRQGDNLLYLAKKEQCLALSAQLKNKFKINDFKIYRIFPTGEVQYLHPKDGVFPEKANPGRKGIGNINHSIGKNDNAVNKKFTGKANYE 138          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A7M1VJW9_SARSK (Photosystem I reaction center subunit II n=4 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A7M1VJW9_SARSK)

HSP 1 Score: 256 bits (655), Expect = 3.420e-86
Identity = 122/137 (89.05%), Postives = 130/137 (94.89%), Query Frame = 0
Query:    2 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            I+LKMPSPTFGGSTGGWLR+AEIEEKYAITWTS  EQ FEMPTGGAAIMREGDNLLYLAKKEQCLALS QLKK FKI DFKIYRIFP+GEVQYLHPKDG+FPEK NPGR+GVGNI+HSIGKN+NPVNKKFTG+ATYE
Sbjct:    5 INLKMPSPTFGGSTGGWLRSAEIEEKYAITWTSKSEQIFEMPTGGAAIMREGDNLLYLAKKEQCLALSAQLKKNFKINDFKIYRIFPNGEVQYLHPKDGMFPEKVNPGREGVGNISHSIGKNENPVNKKFTGQATYE 141          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A1C9CBY2_9FLOR (Photosystem I reaction center subunit II n=1 Tax=Asparagopsis taxiformis TaxID=260499 RepID=A0A1C9CBY2_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 4.860e-86
Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 0
Query:    2 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTS  EQ FEMPTGG+A+MRE DNLLYLAKKEQCLALSTQLK KFKI+DFKIYRIFP+GEVQYLHPKDGV PEK+NPGR GVGNI HSIG+NDNPVNKKFTGKATYE
Sbjct:    5 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSKKEQIFEMPTGGSAVMREDDNLLYLAKKEQCLALSTQLKTKFKIKDFKIYRIFPNGEVQYLHPKDGVAPEKSNPGRTGVGNIQHSIGQNDNPVNKKFTGKATYE 141          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A4D6WS29_9FLOR (Photosystem I reaction center subunit II n=1 Tax=Dicranema revolutum TaxID=239144 RepID=A0A4D6WS29_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 6.910e-86
Identity = 121/138 (87.68%), Postives = 128/138 (92.75%), Query Frame = 0
Query:    1 MIDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            +ID+ MPSP FGGSTGGWL A EIEEKYAITWTS IEQ FEMPTGGAAIMREGDNLLYLAKKEQCLALS+QL+ KFKIRDFKIYRIFPSGE QYLHPKDGVFPEK NPGR+G+GNI HSIGKNDNPVNKKFTG+ATYE
Sbjct:    4 LIDVTMPSPIFGGSTGGWLEAGEIEEKYAITWTSKIEQIFEMPTGGAAIMREGDNLLYLAKKEQCLALSSQLRTKFKIRDFKIYRIFPSGEAQYLHPKDGVFPEKVNPGREGIGNIQHSIGKNDNPVNKKFTGQATYE 141          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A4D6WX20_9FLOR (Photosystem I reaction center subunit II n=1 Tax=Hypnea pannosa TaxID=105607 RepID=A0A4D6WX20_9FLOR)

HSP 1 Score: 254 bits (650), Expect = 1.980e-85
Identity = 124/137 (90.51%), Postives = 127/137 (92.70%), Query Frame = 0
Query:    2 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            I+LKMPSPTFGGSTGGWLRAAEIEEKYAITWTS  EQ FEMPTGGAAIMREGDNLLYLAKKEQCLAL TQL KKFKI DFKIYRIFPSGEVQYLHPKDGVFPEK N GR+GVGNI HSIGKN NPVNKKF+GKATYE
Sbjct:    5 INLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSKKEQCFEMPTGGAAIMREGDNLLYLAKKEQCLALGTQLTKKFKINDFKIYRIFPSGEVQYLHPKDGVFPEKVNSGREGVGNIQHSIGKNKNPVNKKFSGKATYE 141          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: M5DBT5_CHOCR (Photosystem I reaction center subunit II n=1 Tax=Chondrus crispus TaxID=2769 RepID=M5DBT5_CHOCR)

HSP 1 Score: 253 bits (647), Expect = 5.680e-85
Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 0
Query:    2 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            I+ KMPSPTFGGSTGGWLR+AEIEEKYAITWTS  EQ FEMPTGGAAIMREGDNLLYLAKKEQCLALS QL+K FKIRDFKIYRIFP+GEVQYLHPKDGVFPEK NPGR+GVGNI+HSIGKN+NPVN KFTG+ TYE
Sbjct:    5 INFKMPSPTFGGSTGGWLRSAEIEEKYAITWTSKSEQIFEMPTGGAAIMREGDNLLYLAKKEQCLALSAQLRKSFKIRDFKIYRIFPNGEVQYLHPKDGVFPEKVNPGREGVGNISHSIGKNENPVNTKFTGRGTYE 141          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: R9XYS9_9FLOR (Photosystem I reaction center subunit II n=6 Tax=Florideophyceae TaxID=2806 RepID=R9XYS9_9FLOR)

HSP 1 Score: 253 bits (645), Expect = 8.760e-85
Identity = 122/133 (91.73%), Postives = 125/133 (93.98%), Query Frame = 0
Query:    6 MPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            MPSPTFGGSTGGWLRAAEIEEKYAITWTS  EQ FEMPTGGAAIMREG+NLLYLAKKEQCLALSTQL+ KFKI DFKIYRIFP GEVQYLHPKDGVFPEKANPGR+ VGNI HSIGKNDNPVNKKFTGKATYE
Sbjct:    1 MPSPTFGGSTGGWLRAAEIEEKYAITWTSKSEQIFEMPTGGAAIMREGNNLLYLAKKEQCLALSTQLRAKFKITDFKIYRIFPDGEVQYLHPKDGVFPEKANPGRESVGNIQHSIGKNDNPVNKKFTGKATYE 133          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A1C9C7E3_RHOPU (Photosystem I reaction center subunit II n=1 Tax=Rhodymenia pseudopalmata TaxID=31502 RepID=A0A1C9C7E3_RHOPU)

HSP 1 Score: 253 bits (645), Expect = 1.150e-84
Identity = 120/138 (86.96%), Postives = 130/138 (94.20%), Query Frame = 0
Query:    1 MIDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            +I+L+MPSPTFGGSTGGWLRAAEIEEK+AITWTS  E  FEMPTGGAAIMREG+NLLYLAKKEQCLALS QLK KFKI+DFKIYR+FP+GEVQYLHPKDGVFPEK NPGR+GVGNI HSIGKNDNPVNKKFTG+ATYE
Sbjct:    4 IINLEMPSPTFGGSTGGWLRAAEIEEKHAITWTSKEETVFEMPTGGAAIMREGNNLLYLAKKEQCLALSAQLKSKFKIKDFKIYRVFPNGEVQYLHPKDGVFPEKVNPGREGVGNIEHSIGKNDNPVNKKFTGQATYE 141          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A4D6X164_9FLOR (Photosystem I reaction center subunit II n=1 Tax=Spermothamnion repens TaxID=31383 RepID=A0A4D6X164_9FLOR)

HSP 1 Score: 252 bits (644), Expect = 1.630e-84
Identity = 121/137 (88.32%), Postives = 128/137 (93.43%), Query Frame = 0
Query:    2 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            ID KMPSPTFGGSTGGWLRAAEIEEKYAITW S  EQ FEMPTGG+AIM EGDNLLYLAKKEQCLALS+QLK  FKI++FKIYRIFP+GEVQYLHPKDGVFPEKAN GR+GVGNINHSIGKNDNPVNKKFTG+ATYE
Sbjct:    5 IDFKMPSPTFGGSTGGWLRAAEIEEKYAITWISKAEQIFEMPTGGSAIMTEGDNLLYLAKKEQCLALSSQLKTAFKIKNFKIYRIFPNGEVQYLHPKDGVFPEKANQGREGVGNINHSIGKNDNPVNKKFTGQATYE 141          
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Match: A0A342RZJ1_9FLOR (Photosystem I reaction center subunit II n=1 Tax=Mastocarpus papillatus TaxID=31436 RepID=A0A342RZJ1_9FLOR)

HSP 1 Score: 251 bits (640), Expect = 6.630e-84
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 0
Query:    2 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIMREGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDGVFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE 138
            IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTS  EQ FEMPTGG+AIMRE DNLLYLAKKEQCLALSTQLK  FKI DFKIYRIFP+GEVQYLHPKDGVFPEK NPGRK +G I HSIGKN+NP++KKFTG+ATYE
Sbjct:    5 IDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSKTEQIFEMPTGGSAIMREDDNLLYLAKKEQCLALSTQLKTSFKINDFKIYRIFPNGEVQYLHPKDGVFPEKVNPGRKSIGKIEHSIGKNENPISKKFTGEATYE 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100650.140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H4FLP2_9FLOR8.220e-9192.75Photosystem I reaction center subunit II n=4 Tax=S... [more]
A0A7M1VJW9_SARSK3.420e-8689.05Photosystem I reaction center subunit II n=4 Tax=R... [more]
A0A1C9CBY2_9FLOR4.860e-8689.78Photosystem I reaction center subunit II n=1 Tax=A... [more]
A0A4D6WS29_9FLOR6.910e-8687.68Photosystem I reaction center subunit II n=1 Tax=D... [more]
A0A4D6WX20_9FLOR1.980e-8590.51Photosystem I reaction center subunit II n=1 Tax=H... [more]
M5DBT5_CHOCR5.680e-8587.59Photosystem I reaction center subunit II n=1 Tax=C... [more]
R9XYS9_9FLOR8.760e-8591.73Photosystem I reaction center subunit II n=6 Tax=F... [more]
A0A1C9C7E3_RHOPU1.150e-8486.96Photosystem I reaction center subunit II n=1 Tax=R... [more]
A0A4D6X164_9FLOR1.630e-8488.32Photosystem I reaction center subunit II n=1 Tax=S... [more]
A0A342RZJ1_9FLOR6.630e-8486.86Photosystem I reaction center subunit II n=1 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003685Photosystem I PsaDPFAMPF02531PsaDcoord: 6..137
e-value: 4.4E-67
score: 223.8
IPR003685Photosystem I PsaDPANTHERPTHR31982FAMILY NOT NAMEDcoord: 2..138
NoneNo IPR availableGENE3D3.30.1470.10coord: 1..138
e-value: 2.0E-67
score: 226.8
IPR036579Photosystem I, reaction centre subunit PsaD superfamilySUPERFAMILY64234Photosystem I subunit PsaDcoord: 3..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100650contigP-canaliculata_contig100650:264..680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100650.140.1mRNA_P-canaliculata_contig100650.140.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100650 264..680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100650.140.1 ID=prot_P-canaliculata_contig100650.140.1|Name=mRNA_P-canaliculata_contig100650.140.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=139bp
MIDLKMPSPTFGGSTGGWLRAAEIEEKYAITWTSTIEQYFEMPTGGAAIM
REGDNLLYLAKKEQCLALSTQLKKKFKIRDFKIYRIFPSGEVQYLHPKDG
VFPEKANPGRKGVGNINHSIGKNDNPVNKKFTGKATYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003685PsaD
IPR036579PsaD_sf