prot_P-canaliculata_contig10046.108.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10046.108.1
Unique Nameprot_P-canaliculata_contig10046.108.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length125
Homology
BLAST of mRNA_P-canaliculata_contig10046.108.1 vs. uniprot
Match: D7FNR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR2_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 3.060e-57
Identity = 87/111 (78.38%), Postives = 96/111 (86.49%), Query Frame = 0
Query:    1 MWQNTGAVFRLRLSEDGQFESFGGLGTGHLGGRWNTWDADRMFMTVVRSKSHGVQVNGDTMFWGTKIIGPPDSEIPLKISGYVMYGFLEPTCVGRFIMRRSQEAQDGENDT 111
            MWQ+TGAVFRL L ED QFES  GLG+G LGGRWN W  +RMFMTVVRSKSHGVQ++GD MFWGTK+ GPPDS+IPLKISGYVMYGFLEPTCVGRFIMRRSQE +  + DT
Sbjct:  181 MWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERMFMTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLEPTCVGRFIMRRSQEGRTSDEDT 291          
BLAST of mRNA_P-canaliculata_contig10046.108.1 vs. uniprot
Match: A0A835YV66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV66_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.000e-23
Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    6 GAVFRLRLSEDGQFESFGGLGTGH-LGGRWNTWDADRMFMTVVRSKSHGVQVNGDTMFWGTKIIGPPDSEIPLKISGYVMYGFLEPTCVGRFIMRRSQE 103
            G VF L L+EDG F S  G+G G  L GRWNTWD ++  +TVVR KS G Q+  D  +WG KI G  D   P +I+G +MYG+LEPT +G F M R  +
Sbjct:  161 GGVFELMLTEDGGFASVRGVGAGGMLAGRWNTWDREKFILTVVRLKSRGAQMTADHQYWGFKIHG--DGVTPTRITGEIMYGYLEPTSIGCFTMMRPSQ 257          
BLAST of mRNA_P-canaliculata_contig10046.108.1 vs. uniprot
Match: A0A6H5LDX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX9_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.090e-10
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MWQNTGAVFRLRLSEDGQFESFGGLGTGHLGGRWNTWDADRM 42
            MWQ+TGAVFRL L ED QFES  GLG+G LGGRWN W  +R+
Sbjct:  300 MWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10046.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNR2_ECTSI3.060e-5778.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV66_9STRA1.000e-2350.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LDX9_9PHAE2.090e-1069.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10046contigP-canaliculata_contig10046:7844..10598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10046.108.1mRNA_P-canaliculata_contig10046.108.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10046 7016..11507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10046.108.1 ID=prot_P-canaliculata_contig10046.108.1|Name=mRNA_P-canaliculata_contig10046.108.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=125bp
MWQNTGAVFRLRLSEDGQFESFGGLGTGHLGGRWNTWDADRMFMTVVRSK
SHGVQVNGDTMFWGTKIIGPPDSEIPLKISGYVMYGFLEPTCVGRFIMRR
SQEAQDGENDTDADDDDDRDEDLV*
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