prot_P-canaliculata_contig10040.102.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10040.102.1
Unique Nameprot_P-canaliculata_contig10040.102.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length179
Homology
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: D7G6Z9_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z9_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.280e-58
Identity = 100/174 (57.47%), Postives = 121/174 (69.54%), Query Frame = 0
Query:   21 ILKYEYPVLARPRDVFDLNMGHDSLPQYISLCKTTNRRKEEF------------GGAVRTRRSPKA---DNTTFLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            ILKYE PVLARP   FD+ MGHDSLPQYISL  +  RR +E             G    T R P+    D T  LKAI+PN+E+ D  GEWVQTVS    +R +LE ++ KV+A LAT QARP A+CAVRE +FSEL+DE++RE+T++ PERGLLLLRLRDE RMNL+TY EIY
Sbjct:   60 ILKYEDPVLARPDIAFDMRMGHDSLPQYISLYASDERRPDEATQRLAGVGAAAPGSTRNTTRRPRGGGDDITAVLKAILPNKEYADAAGEWVQTVSGTVRSRGELEKVQNKVEARLATLQARPGAVCAVRESVFSELYDEVIREITLQSPERGLLLLRLRDETRMNLDTYAEIY 233          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: A0A8J2T3N5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T3N5_9STRA)

HSP 1 Score: 115 bits (289), Expect = 8.850e-29
Identity = 62/140 (44.29%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   42 HDSLPQYISLCKTTNRRKEEFGGAVRTRRSPKADNTT--FLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            HDSL +Y S    T  R     G        KA   T   L +I+P REWT++G  WVQ VS+   TR D+  L+  +D  L   QAR   IC VRE+++++ FDE++R+VTI C ERGLLLLR+RDE RM +  Y  +Y
Sbjct:    8 HDSLVKYHSPVVVTTARAAPKKGKKGPATPEKASTQTEDILNSILPPREWTEDGTLWVQYVSSTPATRLDVVNLQESLDRKLQQRQARETGICPVREELYAQCFDEVIRQVTINCAERGLLLLRVRDEVRMTIAAYQTLY 147          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: D8LS54_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS54_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 1.530e-28
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 0
Query:   42 HDSLPQYIS--LCKTTNRRKEEFG---GAVRTRRSPKADNTTFLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            H+SL +Y +  L  TT  R  +     G   T   P +     L +I+P REWTD+G  WVQ VS+   TR D+  L+ ++D  L   QAR   IC VRE+++S+ FDE++R+VTI C ERGLLLLR+RDE  M +  Y  +Y
Sbjct:    5 HNSLVKYDNPILVSTTGNRGGKGAKKKGQAPTVERPSSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPVREELYSQCFDELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTMY 147          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: A0A7S2SN15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN15_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.770e-28
Identity = 60/149 (40.27%), Postives = 91/149 (61.07%), Query Frame = 0
Query:   37 DLNMGHDSLPQYIS--LCKTTNRRKEEFGGAVRTRRSPKADNTT----FLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            ++N  HDSL +Y +  L  TT  ++++  G    +  P     T     L +I+P REWT++G  WVQ VS+   TR D+  L+ ++D  L   QAR   IC +RE+++++ FDE++R++TI C ERGLLLLR+RDE RM +  Y  +Y
Sbjct:   14 EMNPPHDSLVKYDNAILVSTTKEKQKKSKGKKGQQLPPVERQGTQTEDILNSILPPREWTEDGQLWVQYVSSTPATRLDVITLQEQLDRKLQQRQARETGICPIREELYAQCFDELIRQITINCAERGLLLLRVRDEIRMTVAAYQTLY 162          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: A0A7S4NUJ5_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NUJ5_GUITH)

HSP 1 Score: 111 bits (278), Expect = 5.110e-28
Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:   80 LKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            L +I+P REWT++G  WVQ VS+   TR D+  L+ ++D+ L T QAR   IC VRE++F + FDE++R+VTI C ERGLLLLR+RDE RM +  Y  +Y
Sbjct:   58 LNSILPPREWTEDGQLWVQFVSSTPATRLDVINLQEELDSKLQTRQARETGICPVREELFRQTFDEVIRQVTINCAERGLLLLRVRDEIRMRIAAYQTLY 157          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: A0A6U4N7B2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6U4N7B2_HEMAN)

HSP 1 Score: 113 bits (283), Expect = 7.770e-28
Identity = 58/135 (42.96%), Postives = 83/135 (61.48%), Query Frame = 0
Query:   46 PQYISLCKTTNRRKEEFGGAVRTRRSPKADNTT-FLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            P  +S  K   + K+    A+   +  KA  T   L AI+P REWT++G  WVQ VS    TR+D  +L   +D  L   +AR   IC +RE+++++ FDE++R++TIEC ERGLLLLR+RDEARM +  Y  +Y
Sbjct:   14 PVLVSSAKDKGKAKKTKAEALGVDKKGKALQTEDILNAILPPREWTEDGELWVQYVSAVPATRSDAISLGESLDQRLQLRRARDSGICTIREELYAQAFDELIRQITIECAERGLLLLRIRDEARMRIAAYQTLY 148          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: A0A5B8N0L6_9CHLO (Light chain of dynein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N0L6_9CHLO)

HSP 1 Score: 113 bits (282), Expect = 1.020e-27
Identity = 62/144 (43.06%), Postives = 87/144 (60.42%), Query Frame = 0
Query:   44 SLPQYIS--LCKTTNRRKEEFGGAVRT------RRSPKADNTTFLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            SL +Y S  L  TT  + +E GG  +       ++S        L +I+P REWT++G  WVQ VS+   TR D+  L+ K+D  L   QAR   IC VRE+++++ FDE++R+VTI C ERGLLLLR+RDE RM +  Y  +Y
Sbjct:    7 SLVKYDSPVLVSTTKDKGKEKGGRKKKDLPPVEQKSGMTQTEDILNSILPPREWTEDGQLWVQYVSSTPATRLDVINLQEKLDQQLQLRQARETGICPVREELYAQCFDELIRQVTINCAERGLLLLRVRDELRMTIAAYQTLY 150          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: L1JVD1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JVD1_GUITC)

HSP 1 Score: 112 bits (281), Expect = 1.160e-27
Identity = 59/137 (43.07%), Postives = 80/137 (58.39%), Query Frame = 0
Query:   43 DSLPQYISLCKTTNRRKEEFGGAVRTRRSPKADNTTFLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            +SL +Y    KT    K +   A    ++        L AI+P REWT+ G  WVQ VS    TR+D   L  ++D  L    AR   IC +RE+I+++ FDE++R+VTI+CPERGLL LRLRDEARM +  Y  +Y
Sbjct:    6 ESLVKYEEAEKT----KSKKSNAAADPKAKSVQTEDILNAILPPREWTEGGELWVQYVSTQMPTRSDAIRLAERLDQRLKLRGAREHGICTIREEIYAQCFDELIRQVTIDCPERGLLFLRLRDEARMRIAAYQSLY 138          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: A0A3P8S7N4_AMPPE (Dynein, axonemal, light intermediate chain 1 n=4 Tax=Amphiprion TaxID=80969 RepID=A0A3P8S7N4_AMPPE)

HSP 1 Score: 113 bits (282), Expect = 1.830e-27
Identity = 64/169 (37.87%), Postives = 90/169 (53.25%), Query Frame = 0
Query:   17 PSSPILKYEYPVLARPRDVFDLNM------GHDSLPQYISLCKTTNRRKEEFGGAVRTRRSPKADNTTFLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            P   +LKYE PVL R +   D  +        DS P        ++           +  + K +N   L  I+P REWT+    WVQ VS+A  TR D+  L+ ++D  L   QAR   IC VR +++S+ FDE++R+VTI C ERGLLLLR+RDE +M +  Y  +Y
Sbjct:    4 PDDSLLKYENPVLVRKKSPKDRPLKVSPQQSADSAPVPXXXXXXSD-----------SSEAIKQENEEILNCILPPREWTEGSQHWVQQVSSAPCTRTDVIHLEERLDTKLQQRQARETGICPVRRELYSQCFDELIRQVTINCAERGLLLLRVRDEIQMTIAAYQTLY 161          
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Match: A0A7S1CN75_9STRA (Hypothetical protein (Fragment) n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN75_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.840e-27
Identity = 59/140 (42.14%), Postives = 83/140 (59.29%), Query Frame = 0
Query:   42 HDSLPQYIS--LCKTTNRRKEEFGGAVRTRRSPKADNTTFLKAIIPNREWTDEGGEWVQTVSNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREVTIECPERGLLLLRLRDEARMNLETYTEIY 179
            H SL +Y +  L  TT  + ++ G                L +I+P REWT EG  WVQ VS+   TR D+  L+ ++D  L T QAR   IC +RE+++++ FDE++R+VTI C ERGLLLLR+RDE RM +  Y  +Y
Sbjct:   12 HQSLVKYDNPVLVSTTKSKGKKKGKLPPVDNQQLTQTEDILNSILPPREWTAEGQLWVQYVSSTPATRLDVINLQEQLDHKLQTRQARETGICPIREELYAQCFDELIRQVTINCAERGLLLLRVRDEIRMTIAAYQTLY 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10040.102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Z9_ECTSI2.280e-5857.47Dynein light chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A8J2T3N5_9STRA8.850e-2944.29Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
D8LS54_ECTSI1.530e-2843.36p28, 28 kDa light chain of axonemal inner dynein a... [more]
A0A7S2SN15_9STRA1.770e-2840.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4NUJ5_GUITH5.110e-2852.00Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A6U4N7B2_HEMAN7.770e-2842.96Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]
A0A5B8N0L6_9CHLO1.020e-2743.06Light chain of dynein n=1 Tax=Chloropicon primus T... [more]
L1JVD1_GUITC1.160e-2743.07Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A3P8S7N4_AMPPE1.830e-2737.87Dynein, axonemal, light intermediate chain 1 n=4 T... [more]
A0A7S1CN75_9STRA1.840e-2742.14Hypothetical protein (Fragment) n=2 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019347Axonemal dynein light chainPFAMPF10211Ax_dynein_lightcoord: 79..179
e-value: 1.1E-35
score: 123.3
IPR019347Axonemal dynein light chainPANTHERPTHR13183AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28coord: 16..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10040contigP-canaliculata_contig10040:9258..10374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10040.102.1mRNA_P-canaliculata_contig10040.102.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10040 9256..10374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10040.102.1 ID=prot_P-canaliculata_contig10040.102.1|Name=mRNA_P-canaliculata_contig10040.102.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=179bp
AKFADDHARPSSTALRPSSPILKYEYPVLARPRDVFDLNMGHDSLPQYIS
LCKTTNRRKEEFGGAVRTRRSPKADNTTFLKAIIPNREWTDEGGEWVQTV
SNAEWTRADLEALKGKVDATLATCQARPRAICAVREQIFSELFDEIVREV
TIECPERGLLLLRLRDEARMNLETYTEIY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019347Axonemal_dynein_light_chain