prot_P-canaliculata_contig100390.99.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100390.99.1
Unique Nameprot_P-canaliculata_contig100390.99.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length292
Homology
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BLAST of mRNA_P-canaliculata_contig100390.99.1 vs. uniprot
Match: A0A2E0QXA7_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E0QXA7_9BACT)

HSP 1 Score: 117 bits (294), Expect = 7.190e-26
Identity = 88/299 (29.43%), Postives = 147/299 (49.16%), Query Frame = 0 
Query:    1 FVGLLSATPIFLLLLNGPIFRFAAKKGLAIYAEKNGLEHQATITGSLWSGPSITDLSLTPEIEATGPVRKLTAKEATIDYSIPALISDGP-LGMLEKLALKQVTLDLVLKEKTEEEKAAEPPKDPDKKPFDPNTLWNLLAADFEIEDVNVSITTGEKTTIIEGFTLVLPPGGTGKIALGKLTLPNGKGSDGFTAPLTSTGDSLTIGDGIQVIDPVRIRSLVLQKEITPILSGQIDL--AGGTLDLGFTRSREISAKLSSGAIDLTKFLPENPPVSTTISA----FNATFSGDFKDPSTW 292
            FVGL+    + LL LNGP FR   K      AEK G+E   TI GS+W G SI ++ L  +     P+  L  +EAT+DY    LI+     G LE + +++ T+++ L E + ++K  +  K    +P D +  WNLL A+F + ++++ I  G+K+  I+ F+L   PG  G+  +  L LP  +     +A L     S+++    Q+     ++SL + +    +  G+ D   AGG     F+ + + S K+  G   +   +P    +   +       +  F GDF++PSTW
Sbjct:   39 FVGLI----VLLLFLNGPGFRIFGKAIALNLAEKQGIEGDFTIDGSIWGGFSIGNVELEGK---ENPLVSLKLEEATVDYDTWGLITSATTFGWLELVRIQKATVEIDLPEPSGDKKKPKEQKKSQAEPKDFSPFWNLLDAEFALAEIDLVIKQGDKSYRIDNFSLQSNPGEDGRFTITGLELPGNEPVSPISAVLQKDEHSVSL-QSWQIGSTTSLQSLTVAESKPGVFDGEADFKFAGGKFSANFSSAGKASLKMHRGTTFVLSEIPAGGEIQAKLGGRVTDLDLRFDGDFENPSTW 329
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100390.99.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E0QXA7_9BACT7.190e-2629.43Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..292
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.525

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100390contigP-canaliculata_contig100390:152..1027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100390.99.1mRNA_P-canaliculata_contig100390.99.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100390 152..1027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100390.99.1 ID=prot_P-canaliculata_contig100390.99.1|Name=mRNA_P-canaliculata_contig100390.99.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=292bp
FVGLLSATPIFLLLLNGPIFRFAAKKGLAIYAEKNGLEHQATITGSLWSG
PSITDLSLTPEIEATGPVRKLTAKEATIDYSIPALISDGPLGMLEKLALK
QVTLDLVLKEKTEEEKAAEPPKDPDKKPFDPNTLWNLLAADFEIEDVNVS
ITTGEKTTIIEGFTLVLPPGGTGKIALGKLTLPNGKGSDGFTAPLTSTGD
SLTIGDGIQVIDPVRIRSLVLQKEITPILSGQIDLAGGTLDLGFTRSREI
SAKLSSGAIDLTKFLPENPPVSTTISAFNATFSGDFKDPSTW
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