prot_P-canaliculata_contig100361.96.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100361.96.1
Unique Nameprot_P-canaliculata_contig100361.96.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length145
Homology
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: A0A5B1BFY9_9FLAO (Leucine-rich repeat domain-containing protein n=1 Tax=Aquimarina sp. RZ0 TaxID=2607730 RepID=A0A5B1BFY9_9FLAO)

HSP 1 Score: 78.6 bits (192), Expect = 7.110e-15
Identity = 102/143 (71.33%), Postives = 116/143 (81.12%), Query Frame = 0
Query:    2 LSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQKE 144
            L + ++YE L +LP LYSLWIDHN+LK LP T+GA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +   + T+KYPL GL+LDNN ++  EI   K IFK FF+LSFEQK+
Sbjct:  106 LQHKKNYEYLSKLPLLYSLWIDHNNLKELPETIGALSQIRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPNVYETEKYPLAGLLLDNNPINDIEINRVKNIFKGFFLLSFEQKK 248          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: UPI001357E40B (hypothetical protein n=1 Tax=Aquimarina sp. AU474 TaxID=2108529 RepID=UPI001357E40B)

HSP 1 Score: 78.2 bits (191), Expect = 2.090e-14
Identity = 63/143 (44.06%), Postives = 80/143 (55.94%), Query Frame = 0
Query:    1 SLSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQK 143
            +L+  ++YE++ +LP LYSLWIDHN+L +LP ++G   XXXXXXXXXXXXXXXX                                            + +D+HT+KYPL GLILDNN LS TE    K +FK FF+LSFEQK
Sbjct:  171 NLATNQNYEIISKLPNLYSLWIDHNELVTLPKSIGKISXXXXXXXXXXXXXXXXLEMNSMKTWVIHAGYNSFKELPAVFTKMPSLLMVHINNNNIE-TIPKDYHTEKYPLAGLILDNNPLSETEKNNIKELFKGFFLLSFEQK 312          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: UPI001C580898 (hypothetical protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C580898)

HSP 1 Score: 72.4 bits (176), Expect = 2.760e-12
Identity = 107/143 (74.83%), Postives = 120/143 (83.92%), Query Frame = 0
Query:    1 SLSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQK 143
            S+++  +Y  LG LP+LYSLWIDHN+LK++P T+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       T+KY L GL+LDNN LS  EI+ AK IFK FF+LSFEQK
Sbjct:  170 SITDSNTYIFLGRLPKLYSLWIDHNELKTIPKTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEKYALAGLLLDNNPLSNKEIERAKRIFKGFFLLSFEQK 312          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: A0A554VRY7_9FLAO (Uncharacterized protein n=2 Tax=Aquimarina TaxID=290174 RepID=A0A554VRY7_9FLAO)

HSP 1 Score: 71.6 bits (174), Expect = 5.220e-12
Identity = 104/143 (72.73%), Postives = 112/143 (78.32%), Query Frame = 0
Query:    2 LSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQKE 144
            LS   +Y LLGELP LYSLWIDHN+L  LP T+GA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         KYPL GLILDNN L  +E +  K +FK FF+LSFEQ +
Sbjct:  172 LSEKHNYTLLGELPNLYSLWIDHNNLDQLPETIGALDQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYPLAGLILDNNPLLDSEKEKGKKLFKGFFLLSFEQNQ 314          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: UPI000465AB7C (leucine-rich repeat domain-containing protein n=1 Tax=Aquimarina macrocephali TaxID=666563 RepID=UPI000465AB7C)

HSP 1 Score: 71.6 bits (174), Expect = 5.260e-12
Identity = 103/143 (72.03%), Postives = 113/143 (79.02%), Query Frame = 0
Query:    2 LSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQKE 144
            L    SY  LG LP LYSLW+DHNDL  LPVT+G     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       T+KY L GLILDNN ++ TE + A+ +FK FF+LSFEQK+
Sbjct:  172 LKGKESYVHLGALPRLYSLWLDHNDLDELPVTIGLLNQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKYTLSGLILDNNPINKTEKRKAQKLFKGFFLLSFEQKK 314          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: A0A3B7BZK1_9FLAO (Leucine-rich repeat domain-containing protein n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A3B7BZK1_9FLAO)

HSP 1 Score: 71.6 bits (174), Expect = 5.550e-12
Identity = 101/137 (73.72%), Postives = 108/137 (78.83%), Query Frame = 0
Query:    7 SYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQK 143
            SY  LG+LP+LYSLWIDHN+LK LP T+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       T+KYPL GLILDNN LS  EI  AK  FK FF+LSF+QK
Sbjct:  184 SYSHLGKLPDLYSLWIDHNNLKELPNTISKLNQIRFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEKYPLAGLILDNNPLSQEEIVKAKETFKGFFLLSFQQK 320          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: A0A504JE51_9FLAO (Leucine-rich repeat domain-containing protein n=1 Tax=Aquimarina algicola TaxID=2589995 RepID=A0A504JE51_9FLAO)

HSP 1 Score: 69.7 bits (169), Expect = 2.430e-11
Identity = 93/142 (65.49%), Postives = 103/142 (72.54%), Query Frame = 0
Query:    2 LSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQK 143
            + N +SYE LG LP+LYS+WIDHN+   LP T+  XXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXX     + TKKYPL GLILD N L  TE K A+ +FK FF+LSFEQK
Sbjct:  164 IHNEKSYEYLGTLPKLYSVWIDHNEFDELPKTIXXXXXXXXXXXXXXXXXXXXXEMSQLKTWVIHAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-YETKKYPLAGLILDGNPLPSTEKKKAQKLFKSFFLLSFEQK 304          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: UPI00191E6A74 (hypothetical protein n=1 Tax=Aquimarina mytili TaxID=874423 RepID=UPI00191E6A74)

HSP 1 Score: 68.9 bits (167), Expect = 4.900e-11
Identity = 101/137 (73.72%), Postives = 110/137 (80.29%), Query Frame = 0
Query:    7 SYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQK 143
            SY LLG+LP+LYSLWID+N+L+ LP T+G       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + KYPL GLILDNN +S  E   AK IFK FF+LSFEQK
Sbjct:  177 SYTLLGQLPKLYSLWIDNNNLEELPETIGHLRQLRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAKYPLAGLILDNNPISEKERIKAKKIFKGFFLLSFEQK 313          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: A0A3A9VG52_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina sp. BL5 TaxID=1714860 RepID=A0A3A9VG52_9FLAO)

HSP 1 Score: 65.1 bits (157), Expect = 1.190e-9
Identity = 105/143 (73.43%), Postives = 115/143 (80.42%), Query Frame = 0
Query:    1 SLSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQK 143
            ++ + +SY  LG+LP+LYSLWIDHN+LK LP T+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          Y L GLILDNN L  TEI  AK IF  FF+LSF+QK
Sbjct:  169 TIEDEKSYSYLGKLPKLYSLWIDHNNLKELPSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALAGLILDNNPLPETEILRAKKIFNGFFLLSFKQK 311          
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Match: A0A1M6AUY8_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina spongiae TaxID=570521 RepID=A0A1M6AUY8_9FLAO)

HSP 1 Score: 60.5 bits (145), Expect = 5.330e-8
Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 0
Query:    2 LSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAEDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQK 143
            L   +++E L +LP+LYSLW+DHN++K        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     + T+KYPL GL+LDNN +S  E + A+ +FK FF+LSFEQK
Sbjct:  174 LEGTQNFEFLAKLPKLYSLWLDHNEIKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSTEKYPLAGLLLDNNPISGVEKEKAQELFKGFFLLSFEQK 315          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100361.96.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A5B1BFY9_9FLAO7.110e-1571.33Leucine-rich repeat domain-containing protein n=1 ... [more]
UPI001357E40B2.090e-1444.06hypothetical protein n=1 Tax=Aquimarina sp. AU474 ... [more]
UPI001C5808982.760e-1274.83hypothetical protein n=1 Tax=Aquimarina litoralis ... [more]
A0A554VRY7_9FLAO5.220e-1272.73Uncharacterized protein n=2 Tax=Aquimarina TaxID=2... [more]
UPI000465AB7C5.260e-1272.03leucine-rich repeat domain-containing protein n=1 ... [more]
A0A3B7BZK1_9FLAO5.550e-1273.72Leucine-rich repeat domain-containing protein n=3 ... [more]
A0A504JE51_9FLAO2.430e-1165.49Leucine-rich repeat domain-containing protein n=1 ... [more]
UPI00191E6A744.900e-1173.72hypothetical protein n=1 Tax=Aquimarina mytili Tax... [more]
A0A3A9VG52_9FLAO1.190e-973.43Uncharacterized protein n=1 Tax=Aquimarina sp. BL5... [more]
A0A1M6AUY8_9FLAO5.330e-869.72Uncharacterized protein n=1 Tax=Aquimarina spongia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..136
e-value: 1.3E-20
score: 75.1
NoneNo IPR availablePANTHERPTHR16083:SF18coord: 12..122
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 12..122
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 10..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100361contigP-canaliculata_contig100361:595..1029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100361.96.1mRNA_P-canaliculata_contig100361.96.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100361 595..1029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100361.96.1 ID=prot_P-canaliculata_contig100361.96.1|Name=mRNA_P-canaliculata_contig100361.96.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=145bp
SLSNPRSYELLGELPELYSLWIDHNDLKSLPVTLGAISQIRFLYIEHNGL
EQLPEEISGMKKLWVLHAGYNNFRELPLEFTNMNSLLMVHINNNQIQNVA
EDFHTKKYPLKGLILDNNVLSPTEIKYAKYIFKDFFMLSFEQKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf