prot_P-canaliculata_contig100356.94.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig100356.94.1
Unique Name	prot_P-canaliculata_contig100356.94.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	87

Homology

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: UPI001675FE25 (PQQ-dependent sugar dehydrogenase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001675FE25)

HSP 1 Score: 133 bits (335), Expect = 1.140e-35
Identity = 70/97 (72.16%), Postives = 79/97 (81.44%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEG----GEGKL-------LRVTP 86
            W PSIAPSGLAIYRG+MFP W+GDALIGGLASRDLRRV +E G SVGEEDLLSDL+GRVRDVR+A DGAVL+L+E     G+GKL       LR+TP
Sbjct:  300 WVPSIAPSGLAIYRGDMFPDWNGDALIGGLASRDLRRVDLENGVSVGEEDLLSDLNGRVRDVRVASDGAVLILLESRDVDGDGKLDANSGQLLRITP 396

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: UPI00040A0321 (PQQ-dependent sugar dehydrogenase n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00040A0321)

HSP 1 Score: 122 bits (307), Expect = 8.970e-32
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGGE-GKLLRVTP 86
            W PSIAPSGLAIYRG+MFP+W+GDALIGGL S+DLRR+ +E G S+GE  LLSDL  RVRDVRI + GA+LVL +  E GKLLRVTP
Sbjct:  282 WVPSIAPSGLAIYRGDMFPKWNGDALIGGLVSKDLRRIDLENGASLGETSLLSDLGERVRDVRIDQSGAILVLTDDPENGKLLRVTP 368

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: A0A420WEL2_9PROT (Glucose/arabinose dehydrogenase n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WEL2_9PROT)

HSP 1 Score: 120 bits (302), Expect = 5.430e-31
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGGE-GKLLRVT 85
            W PSIAPSGLAIYRG+MFP+W GDA+IGGLASRDLR V ++GG++V E DLLSDL  R+RDVRIA+DG++LVL +  E G+LLRV+
Sbjct:  289 WVPSIAPSGLAIYRGDMFPEWQGDAIIGGLASRDLRLVNLKGGQAVNEIDLLSDLDKRIRDVRIAKDGSLLVLTDDDENGQLLRVS 374

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: A0A2G2MS10_9PROT (Glucose dehydrogenase n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MS10_9PROT)

HSP 1 Score: 115 bits (289), Expect = 4.960e-29
Identity = 57/87 (65.52%), Postives = 69/87 (79.31%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGGE-GKLLRVTP 86
            WTPSIAPSGL IYRG MFP W+GDA +GGL SRDLRRV +E G+ VGE  LL+DL+ R+RDVR A DG++LV+ +    GKLLR+TP
Sbjct:  299 WTPSIAPSGLTIYRGAMFPDWNGDAFVGGLKSRDLRRVDLEDGKFVGEYSLLADLNLRIRDVRTAPDGSILVVTDANPTGKLLRITP 385

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: A0A1Q2M3T1_9GAMM (Glucose dehydrogenase n=7 Tax=Microbulbifer agarilyticus TaxID=260552 RepID=A0A1Q2M3T1_9GAMM)

HSP 1 Score: 114 bits (284), Expect = 2.070e-28
Identity = 49/86 (56.98%), Postives = 69/86 (80.23%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGGEGKLLRVTP 86
            WTPSIAP+GLAIYRGE+FPQWDGD L+  LA R LR V +EGG+ + +++L++DL  R+RDVR+ +DGA+ +L +  +GKLL++ P
Sbjct:  283 WTPSIAPAGLAIYRGELFPQWDGDLLVAALAGRHLRLVEMEGGKPIAQQELIADLEERIRDVRVGQDGAIYLLTDSDQGKLLKLQP 368

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: A0A7Y1SND6_9PROT (PQQ-dependent sugar dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=A0A7Y1SND6_9PROT)

HSP 1 Score: 113 bits (282), Expect = 4.000e-28
Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGGE-GKLLRVTP 86
            W PSIAPSG+ IYRG MFP W+GDALIGGL SRD+RR+ +E  +SVGEE L + L  R+RDVR A DG++L++ +  E GKLLR+TP
Sbjct:  280 WVPSIAPSGMTIYRGNMFPDWNGDALIGGLMSRDVRRIDLENSKSVGEEALFTGLDARIRDVRAAPDGSILLVTDDPENGKLLRITP 366

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: A0A4Q3NR37_9BURK (PQQ-dependent sugar dehydrogenase (Fragment) n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q3NR37_9BURK)

HSP 1 Score: 104 bits (259), Expect = 2.510e-26
Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGGEGKLLRVTP 86
            WTPSIAP+GLA+Y G++FPQW GD  +  L  R LRRV+ E G+ V +E +L+DL+ R+RDV++A DGA+ VL +G + KLLR+ P
Sbjct:   96 WTPSIAPAGLAVYAGDLFPQWQGDLFVPALKERSLRRVVREQGKIVRQERMLTDLNERIRDVKVAPDGALYVLTDGRDAKLLRIVP 181

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: A0A2G2QZE9_9PROT (Glucose dehydrogenase n=3 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2QZE9_9PROT)

HSP 1 Score: 108 bits (269), Expect = 3.230e-26
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGG-EGKLLRVTP 86
            W PSIAPSGL IYRG +F  WDGDAL+GGL SRDLRRV +E G+ V E  LL  LS R+RDVR A DG++LVL +    GKLLR+TP
Sbjct:  284 WVPSIAPSGLTIYRGTLFLGWDGDALVGGLKSRDLRRVDLEDGKFVREYILLEGLSARIRDVRTAPDGSILVLTDDATNGKLLRITP 370

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: A0A2D4WB55_9GAMM (GSDH domain-containing protein n=1 Tax=Pseudomonadales bacterium TaxID=1891229 RepID=A0A2D4WB55_9GAMM)

HSP 1 Score: 102 bits (254), Expect = 7.840e-26
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEGGEGKLLRVTP 86
            WTPSIAPSG+ +YRGE+FPQW G+ L+  LA R++RRV+++G   V +E L  +L  R RDVR   DGAV +L +   G +LRVTP
Sbjct:   73 WTPSIAPSGMTLYRGELFPQWQGNLLVSALAGREVRRVVLDGTEVVEQESLFKELGARFRDVRTGPDGAVYLLTDSANGSVLRVTP 158

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BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Match: UPI00036D9187 (PQQ-dependent sugar dehydrogenase n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI00036D9187)

HSP 1 Score: 105 bits (263), Expect = 2.770e-25
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0

Query:    1 WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEEDLLSDLSGRVRDVRIARDGAVLVLIEG-GEGKLLRVTP 86
            W PSIAPSG A+ RG+MF  W GD L+GGLAS+DLRRV ++ G+ V E  LL D+S R+RDVR+  DGA+ VL +   +GKL+R+TP
Sbjct:  296 WKPSIAPSGFALIRGDMFADWSGDLLVGGLASKDLRRVHMDSGKPVSETILLGDMSARIRDVRLGPDGAIYVLTDAPDDGKLIRITP 382

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig100356.94.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001675FE25	1.140e-35	72.16	PQQ-dependent sugar dehydrogenase n=1 Tax=Litorimo...	[more]
UPI00040A0321	8.970e-32	71.26	PQQ-dependent sugar dehydrogenase n=1 Tax=Hellea b...	[more]
A0A420WEL2_9PROT	5.430e-31	69.77	Glucose/arabinose dehydrogenase n=1 Tax=Litorimona...	[more]
A0A2G2MS10_9PROT	4.960e-29	65.52	Glucose dehydrogenase n=1 Tax=Robiginitomaculum sp...	[more]
A0A1Q2M3T1_9GAMM	2.070e-28	56.98	Glucose dehydrogenase n=7 Tax=Microbulbifer agaril...	[more]
A0A7Y1SND6_9PROT	4.000e-28	62.07	PQQ-dependent sugar dehydrogenase n=2 Tax=Bacteria...	[more]
A0A4Q3NR37_9BURK	2.510e-26	54.65	PQQ-dependent sugar dehydrogenase (Fragment) n=1 T...	[more]
A0A2G2QZE9_9PROT	3.230e-26	64.37	Glucose dehydrogenase n=3 Tax=Robiginitomaculum sp...	[more]
A0A2D4WB55_9GAMM	7.840e-26	53.49	GSDH domain-containing protein n=1 Tax=Pseudomonad...	[more]
UPI00036D9187	2.770e-25	57.47	PQQ-dependent sugar dehydrogenase n=1 Tax=Robigini...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	2.120.10.30		coord: 1..86 e-value: 1.9E-19 score: 72.1
IPR012938	Glucose/Sorbosone dehydrogenase	PFAM	PF07995	GSDH	coord: 1..83 e-value: 1.2E-24 score: 87.2
IPR011041	Soluble quinoprotein glucose/sorbosone dehydrogenase	SUPERFAMILY	50952	Soluble quinoprotein glucose dehydrogenase	coord: 20..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig100356	contig	P-canaliculata_contig100356:208..468 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig100356.94.1	mRNA_P-canaliculata_contig100356.94.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig100356 208..468 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig100356.94.1 ID=prot_P-canaliculata_contig100356.94.1|Name=mRNA_P-canaliculata_contig100356.94.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=87bp
WTPSIAPSGLAIYRGEMFPQWDGDALIGGLASRDLRRVLIEGGRSVGEED
LLSDLSGRVRDVRIARDGAVLVLIEGGEGKLLRVTP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011042	6-blade_b-propeller_TolB-like
IPR012938	Glc/Sorbosone_DH
IPR011041	Quinoprot_gluc/sorb_DH