prot_P-canaliculata_contig10030.88.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10030.88.1
Unique Nameprot_P-canaliculata_contig10030.88.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length333
Homology
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BLAST of mRNA_P-canaliculata_contig10030.88.1 vs. uniprot
Match: D8LD31_ECTSI (Ankyrin repeat-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD31_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 3.740e-80
Identity = 122/156 (78.21%), Postives = 133/156 (85.26%), Query Frame = 0 
Query:    1 MECFRVGNKDCVDGADTSVPERPRSPPPPETSEERDWPEYPKTMTRNADGTNVLQKRMERAIYDAIRTGDTHPIVGLIRAGVSPNFKRPAGETCLHAAAYCGEMDLVKDLMGRNSDPTVKDSHGNLPVDLAAMQGKDEVVAYLQPLAPSSTAFTIA 156
            MECFR GN+DCV+GA  + P R  SPPP    +ER+WPEYPKTMTRN DGT+VL+KRMERAIY+AIR GDT PIVGLIRAGVSPNFKRPAGETCLHAAAYCG +DLVKDL  R +DP VKDSHGNLPVDLAAMQGKD VV +LQPLAPS T FTIA
Sbjct:  120 MECFRAGNRDCVEGAVNNTPPRRLSPPPEALPDEREWPEYPKTMTRNKDGTSVLEKRMERAIYEAIRLGDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCGALDLVKDLAERKADPAVKDSHGNLPVDLAAMQGKDAVVGFLQPLAPSKTPFTIA 275
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BLAST of mRNA_P-canaliculata_contig10030.88.1 vs. uniprot
Match: A0A6H5KU86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU86_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 3.580e-78
Identity = 128/166 (77.11%), Postives = 141/166 (84.94%), Query Frame = 0 
Query:    1 MECFRVGNKDCVDGADTSVPERPRSPPPPETSEERDWPEYPKTMTRNADGTNVLQKRMERAIYDAIRTGDTHPIVGLIRAGVSPNFKRPAGETCLHAAAYCGEMDLVKDLMGRNSDPTVKDSHGNLPVDLAAMQGKDEVVAYLQPLAPSSTAFTIAAHKRHRHKQQ 166
            MECFR G++DCV+GA  + P R  SPPP    +ER+WPEYPKTMTRN DGT+VL+KRMERAIY+AIR GDT PIVGLIRAGVSPNFKRPAGETCLHAAAYCG +DLVKDL  R +DP VKDSHGNLPVDLAAMQGKDEVV +LQPLAPS T FTIAAH+RHR   Q
Sbjct:  831 MECFRAGDRDCVEGAVNNTPPRRLSPPPEALPDEREWPEYPKTMTRNKDGTSVLEKRMERAIYEAIRLGDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCGALDLVKDLAERKADPAVKDSHGNLPVDLAAMQGKDEVVGFLQPLAPSKTPFTIAAHQRHRRVSQ 996
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BLAST of mRNA_P-canaliculata_contig10030.88.1 vs. uniprot
Match: A0A672H3I0_SALFA (Uncharacterized protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672H3I0_SALFA)

HSP 1 Score: 56.2 bits (134), Expect = 2.690e-6
Identity = 32/91 (35.16%), Postives = 46/91 (50.55%), Query Frame = 0 
Query:   57 RMERAIYDAIRTGDTHPIVGLIRAGVSPNFK-RPAGETCLHAAAYCGEMDLVKDLMGRNSDPTVKDSHGNLPVDLAAMQGKDEVVAYLQPL 146
            R  R     +  G T     L++ G  PN   R  G T LH AA  G +D V+ L+   +DP  +D   ++P DLAA  G ++V ++LQ L
Sbjct:   36 RFGRTALQVMMMGSTPVAQVLLKHGADPNVADRSTGATPLHDAARTGFLDTVRLLVHFGADPRARDHANDVPADLAAQHGHEDVASFLQTL 126
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BLAST of mRNA_P-canaliculata_contig10030.88.1 vs. uniprot
Match: A0A2E6T4H9_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E6T4H9_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 3.100e-6
Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 0 
Query:   50 GTNVLQKRMER--AIYDAIRTGDTHPIVGLIRAGVSPNFKRPAGETCLHAAAYCGEMDLVKDLMGRNSDP--TVK--DSHGNLPVDLAAMQGKDEVVAYL 143
            G NV  K ++   A+ +AI+ G+T     L+  G SPN     G TCLH AAY G++D+ K L+  N+D   TVK     G  P+D AAM GK + +  L
Sbjct:  398 GANVHAKGVKERDALMEAIKIGNTEVAALLLDNGASPNSVDEDGVTCLHIAAYRGQVDICKKLLAGNADKDATVKVGPKKGFKPID-AAMDGKHQEIINL 496
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BLAST of mRNA_P-canaliculata_contig10030.88.1 vs. uniprot
Match: A0A0C9Q7V4_9HYME (Git2_0 protein n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9Q7V4_9HYME)

HSP 1 Score: 55.1 bits (131), Expect = 8.920e-5
Identity = 30/117 (25.64%), Postives = 60/117 (51.28%), Query Frame = 0 
Query:   56 KRMERAIYDAIRTGDTHPIVGLIRAGVSPN-FKRPAGETCLHAAAYCGEMDLVKDLMGRNSDPTVKDSHGNLPVDLAAMQG----KDEVVAYLQPLAPSSTAFTIAAHKRHRHKQQL 167
            + + + ++ ++RTG+    + L+  G +PN F +  G   LH AA  G+   V+ L+    +P++ DS+G+ P+++A M G     + +V  +  +    T F  +    HR ++ L
Sbjct:  131 EELSKQLHSSVRTGNLETSLRLLAQGANPNYFYKEKGTNPLHVAARAGQALQVELLIANGGNPSLIDSNGHTPMEIARMSGHLELSERLVECMYEVTDRLTFFVCSRKPDHRSQEHL 247
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10030.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LD31_ECTSI3.740e-8078.21Ankyrin repeat-containing protein, putative n=1 Ta... [more]
A0A6H5KU86_9PHAE3.580e-7877.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A672H3I0_SALFA2.690e-635.16Uncharacterized protein n=1 Tax=Salarias fasciatus... [more]
A0A2E6T4H9_9BACT3.100e-640.00Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
A0A0C9Q7V4_9HYME8.920e-525.64Git2_0 protein n=1 Tax=Fopius arisanus TaxID=64838... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..222
NoneNo IPR availablePFAMPF13857Ank_5coord: 77..131
e-value: 1.9E-9
score: 37.6
NoneNo IPR availablePANTHERPTHR16036FAMILY NOT NAMEDcoord: 49..234
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 123..152
e-value: 190.0
score: 10.4
coord: 90..119
e-value: 0.071
score: 22.2
coord: 57..86
e-value: 2400.0
score: 2.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 90..122
score: 10.526
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 42..211
e-value: 1.7E-19
score: 71.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 51..161
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 57..143
score: 18.802

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10030contigP-canaliculata_contig10030:1251..3425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10030.88.1mRNA_P-canaliculata_contig10030.88.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10030 843..3548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10030.88.1 ID=prot_P-canaliculata_contig10030.88.1|Name=mRNA_P-canaliculata_contig10030.88.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=333bp
MECFRVGNKDCVDGADTSVPERPRSPPPPETSEERDWPEYPKTMTRNADG
TNVLQKRMERAIYDAIRTGDTHPIVGLIRAGVSPNFKRPAGETCLHAAAY
CGEMDLVKDLMGRNSDPTVKDSHGNLPVDLAAMQGKDEVVAYLQPLAPSS
TAFTIAAHKRHRHKQQLKQQKQQKEYQQQQQQLQQQQQLQQQQEQEQQQQ
QQQQQQFQLRQQQLQLQQQQRQHQQQHHLQQQQQQQYLAPGHPQPHQARQ
GFLPLLPQHLRQQHQRQPQPFQLQQPPPLFAPHNPHGSLPPPSAQFRAQN
SLQQLQPHQQQQPPHQPPQQQQQQQQSHPGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom