prot_P-canaliculata_contig100272.80.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig100272.80.1
Unique Name	prot_P-canaliculata_contig100272.80.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	258

Homology

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BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: UPI00167665F4 (response regulator n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167665F4)

HSP 1 Score: 354 bits (909), Expect = 4.370e-121
Identity = 183/255 (71.76%), Postives = 213/255 (83.53%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 255
            MSLVE Y P++PYLRRFARALTGSQ+ GDTYVR ALEAL AG+AS+D  L PK+ L++MFL IW++TG  L+   A EG T   RV KLTPASRQAFLL ++EG+  +D A +M V  A A  ++ EAEADIEKELRTNVLIIEDEPIIAADIEG+V +LGHTVD+I+AT  +AV+ AKAK PG+VLADV LADGSSGIDAV DIL +Y+VPVIFITAFPERLLTG++PEPAYLISKPF P+NVKAAISQALFFH
Sbjct:    1 MSLVEKYAPHIPYLRRFARALTGSQSEGDTYVRAALEALVAGSASLDQNLSPKVGLFQMFLGIWNSTGGTLDDGSAPEGDTPEARVRKLTPASRQAFLLNAVEGIPAQDIAVIMRVEEAAAQSLLDEAEADIEKELRTNVLIIEDEPIIAADIEGIVEDLGHTVDAIAATETEAVKAAKAKKPGIVLADVQLADGSSGIDAVADILKKYDVPVIFITAFPERLLTGERPEPAYLISKPFRPENVKAAISQALFFH 255

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BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A848V2Q5_9PROT (Response regulator n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V2Q5_9PROT)

HSP 1 Score: 351 bits (901), Expect = 6.960e-120
Identity = 186/257 (72.37%), Postives = 214/257 (83.27%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 257
            MSLVE Y P+LPYLRRF+RALTGSQ+ GD YVR ALEAL AG A ++SEL PK+ALY+MFL IW+ TGA LE ++  +   A  R+ +LTP SRQAFLL +LEG+SV D A+VM  +  EA  ++ EAEADIE ELRTNVLIIEDEPIIAADIE LV ELGHTVD+I+ATH DAV  A+ K PG+VLAD+ LADGSSGIDAV+DIL  YNVPVIFITAFPERLLTGDKPEPAYLISKPF+PDNVKAAISQALFFH++
Sbjct:    1 MSLVEKYAPHLPYLRRFSRALTGSQSDGDRYVRVALEALVAGDAELNSELMPKVALYQMFLTIWNATGALLE-DDPGDAELASNRIRRLTPLSRQAFLLNALEGMSVDDIASVMGKSVEEAEALMMEAEADIENELRTNVLIIEDEPIIAADIESLVEELGHTVDAIAATHTDAVAAAEQKKPGIVLADIQLADGSSGIDAVEDILKSYNVPVIFITAFPERLLTGDKPEPAYLISKPFQPDNVKAAISQALFFHNA 256

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BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: UPI0003FD6F41 (response regulator n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003FD6F41)

HSP 1 Score: 348 bits (894), Expect = 8.080e-119
Identity = 185/257 (71.98%), Postives = 212/257 (82.49%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 257
            MSLVETY P+LPYLRRF+RALTGSQ+ GDTYVRTALEAL AG   ++ +L PKIALY+MFL IWSTTGA+LE +   E   A +RV KL P SRQAFLL +LEG++  D A VMN+ P  A  ++ EAE+DIEKELRTNVLIIEDEPIIAADIEGLV +LGH+VD+I+ATH DAV     K PGL+LADV LADGSSGI+AV++I    NVPVIFITAFPERLLTGDKPEPAYLISKPF+P NVKAAISQALFFHD+
Sbjct:    1 MSLVETYAPHLPYLRRFSRALTGSQSEGDTYVRTALEALVAGDIVLEGDLSPKIALYQMFLTIWSTTGAKLEADREDEAVPA-KRVRKLPPTSRQAFLLNALEGMTPADIAKVMNIAPEYADTLLAEAESDIEKELRTNVLIIEDEPIIAADIEGLVEDLGHSVDNIAATHKDAVSAVSEKKPGLILADVQLADGSSGIEAVEEITKTLNVPVIFITAFPERLLTGDKPEPAYLISKPFKPGNVKAAISQALFFHDA 256

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BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: UPI000379715B (response regulator n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000379715B)

HSP 1 Score: 348 bits (892), Expect = 1.690e-118
Identity = 182/255 (71.37%), Postives = 211/255 (82.75%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 255
            MSL+++  P+LPYLRRF+RALTGSQA GD YVR ALEAL AG + ID  + PK+ALYRMFL IW T+GA LE  +     T   R+ +LTP SRQAFLL +LEG+S  + A VMNV+  +A  ++ +AE+DIEKELRTNVLIIEDEPIIAADIE LV ELGHTVDSISATH++AV+NA AK PG+VLAD+ LADGSSGIDAV DIL +Y+VPVIFITAFPERLLTGDKPEPAYLISKPF P+NVKAAISQALFFH
Sbjct:    1 MSLLDSLAPHLPYLRRFSRALTGSQAEGDRYVRIALEALVAGNSEIDETIAPKVALYRMFLGIWDTSGAHLEA-DGQNTETTADRIRRLTPRSRQAFLLSALEGMSTGEIAIVMNVSDDDAQALLDDAESDIEKELRTNVLIIEDEPIIAADIEDLVEELGHTVDSISATHSEAVKNASAKKPGIVLADIQLADGSSGIDAVSDILKEYDVPVIFITAFPERLLTGDKPEPAYLISKPFRPENVKAAISQALFFH 254

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BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A8J3CP60_9PROT (Response regulator n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CP60_9PROT)

HSP 1 Score: 342 bits (878), Expect = 2.270e-116
Identity = 181/257 (70.43%), Postives = 211/257 (82.10%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 257
            MSLVE + P+LPYLRRF+RALTGSQ +GDTYVR ALEAL AG   +  ++ PK+AL++MFL IW++TGAQLE   + EG+TA  RV +L P SRQAFLL SLEGLS  D A VMNV    A  ++ +AE++IEKELRTNVLIIEDE IIAADIEGLV +LGHTVD++ AT  +AV+ AK K PG+VLADV LADGSSGIDAV DIL+ Y+VPVIFITAFPERLLTGDKPEPAYLISKPF P+NVKAAISQALFFH +
Sbjct:    1 MSLVEKFAPHLPYLRRFSRALTGSQTAGDTYVRNALEALVAGDTVLSEDMTPKLALFQMFLGIWNSTGAQLENTPSDEGATASARVRRLAPRSRQAFLLSSLEGLSNDDIAKVMNVDLDAATALLADAESEIEKELRTNVLIIEDESIIAADIEGLVQDLGHTVDTVVATRTEAVKAAKIKKPGIVLADVQLADGSSGIDAVADILADYDVPVIFITAFPERLLTGDKPEPAYLISKPFRPENVKAAISQALFFHSA 257

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BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A420WEK5_9PROT (Response regulator receiver domain-containing protein n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WEK5_9PROT)

HSP 1 Score: 338 bits (866), Expect = 1.520e-114
Identity = 175/256 (68.36%), Postives = 214/256 (83.59%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHD 256
            MSLV+++ P+LPYLRRF+RALTGSQ++GDTYVRTALEAL AG   I ++  PK+AL++MFL IW+++G  LET+   +  +   R+ KLTPASRQAFLL +LE L++ + A VM ++  EA  ++ EAEADIEKELRTNVLI+EDEPIIAADIEGLV ELGHTVDSI+AT  +AV+ A  K+PG+VLADV LADGSSGIDAV DIL ++ VP+IFITAFPE+LLTGDKPEPAYLISKPF P+NVKAAISQALFFH+
Sbjct:    1 MSLVQSFAPHLPYLRRFSRALTGSQSAGDTYVRTALEALVAGNVQISADEDPKLALFKMFLGIWNSSGGVLETDGEEKEQSPSARIRKLTPASRQAFLLSALESLNLDEVAYVMGLSKDEAAALLTEAEADIEKELRTNVLIVEDEPIIAADIEGLVEELGHTVDSIAATRTEAVKAAARKTPGIVLADVQLADGSSGIDAVSDILDEHAVPIIFITAFPEKLLTGDKPEPAYLISKPFNPENVKAAISQALFFHN 256

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BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A520XTI4_9ACTN (Response regulator n=2 Tax=Bacteria TaxID=2 RepID=A0A520XTI4_9ACTN)

HSP 1 Score: 334 bits (857), Expect = 3.670e-113
Identity = 174/255 (68.24%), Postives = 206/255 (80.78%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 255
            MS  +T+ PYLPYLRRF+RALTGSQ +GDTYVRTAL +L      +D +L PK+AL+RMFL IW++TGA LE     +G    +R+ +LTP SRQAFLL +LEG++  + + VM    AE   ++KEAEADIEKELRTNVLIIEDEPIIAADIEGLV ELGH+VDSI+ATH +AV+ A  K PG+VLADV LADGSSGIDAV +IL   +VPVIFITAFPERLLTG++PEPAYLISKPF+PDNVKAAISQALFFH
Sbjct:    1 MSYADTFAPYLPYLRRFSRALTGSQDTGDTYVRTALISLVEDPTIMDDKLEPKVALFRMFLGIWNSTGALLENKTRPDGDAPAERIRRLTPLSRQAFLLNALEGMTATEISDVMGKPEAEVDALLKEAEADIEKELRTNVLIIEDEPIIAADIEGLVSELGHSVDSIAATHTEAVKAANNKKPGIVLADVQLADGSSGIDAVHEILGGMDVPVIFITAFPERLLTGERPEPAYLISKPFKPDNVKAAISQALFFH 255

[Close]

BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A258H4X0_9PROT (Response regulator n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A258H4X0_9PROT)

HSP 1 Score: 300 bits (769), Expect = 9.310e-100
Identity = 157/255 (61.57%), Postives = 198/255 (77.65%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 255
            MSLV+  GP+LPYLRR+ARALTG+Q SGD+YV+ AL+ALA G   +D +LPP++ALYR+F AIW  TGA+LET     G T   RV ++ P  RQAFLL +LEG +V++ A +++ T      +I  A+ DIE +L T VLIIEDEP+IAADIE LVL+LGH V +++ T  +AV   KA+ PGLVLAD+ LADGSSGIDAV+DIL  ++VPVIFITAFPERLLTG+KPEPA+LI+KPF+P+ VKAAI QALFFH
Sbjct:    1 MSLVQKLGPHLPYLRRYARALTGNQKSGDSYVKAALQALAEGTHELD-DLPPRVALYRLFQAIWGATGARLETAPET-GDTVSDRVLRIPPRHRQAFLLTALEGFTVEECAEILDETSESVRQLISRAQRDIEADLATEVLIIEDEPVIAADIEALVLDLGHRVTTVATTRTEAVAAVKARKPGLVLADIQLADGSSGIDAVNDILRGHDVPVIFITAFPERLLTGEKPEPAFLITKPFQPETVKAAIGQALFFH 253

[Close]

BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A7L5Z6Y3_9CAUL (Response regulator n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A7L5Z6Y3_9CAUL)

HSP 1 Score: 298 bits (762), Expect = 1.190e-98
Identity = 154/255 (60.39%), Postives = 191/255 (74.90%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 255
            MSL+    P+LPY+RR+ARALTG QASGDTYVR  LEALAAG   + +++ P++ALY +F  IWS+TGA +E  + V G  A  R+ K++P SRQAFLL +L G +  + A ++     +   +I EA+ADI+ EL T+VLIIEDE II+ADIE LV ELGH+V   + THA+AV     + PGLVLAD+ LADGSSGIDAV DIL   NVPVIFITAFPERLLTGD+PEP +LI+KPF+PD VKAAISQALFFH
Sbjct:    1 MSLLARLAPHLPYVRRYARALTGDQASGDTYVRVTLEALAAGERQLPADMTPQVALYHVFHTIWSSTGAXMEDPDPVXGQQASDRLLKISPRSRQAFLLTALXGFTPSEAAQILGADMGQVAQLIAEAQADIDAELATDVLIIEDEAIISADIESLVRELGHSVSGTATTHAEAVEAVSRRRPGLVLADIQLADGSSGIDAVXDILKAINVPVIFITAFPERLLTGDRPEPTFLITKPFQPDTVKAAISQALFFH 255

[Close]

BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A1R4F2S3_BREDI (DNA-directed RNA polymerase specialized sigma subunit, sigma24-like n=24 Tax=Bacteria TaxID=2 RepID=A0A1R4F2S3_BREDI)

HSP 1 Score: 297 bits (760), Expect = 2.400e-98
Identity = 154/257 (59.92%), Postives = 194/257 (75.49%), Query Frame = 0

Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 257
            MSL+    P+LPY+RR+ARALTG Q +GD YVR ALEALAAG   + +++ P++ALY +F  IWS TGAQLE   AVEG  A  R+ +++P SRQAFLL +LEG +  + A ++ V P     +I EA++DI+ EL T+VLIIEDE II+ADIE LV ELGH V   + TH +AV      +PGLVLAD+ LADGSSGIDAV DIL +++VPVIFITAFPERLLTG++PEP +LI+KPF+P+ VKAAISQALFFH S
Sbjct:    1 MSLLARLAPHLPYVRRYARALTGDQTTGDNYVRVALEALAAGERQLPTDMTPRVALYHVFHTIWSATGAQLEDGGAVEGDDAAHRLMRISPRSRQAFLLTALEGFTPSEAAQILAVDPRTVERLIAEAQSDIDAELTTDVLIIEDEAIISADIESLVKELGHRVTGTATTHDEAVDAVARHTPGLVLADIQLADGSSGIDAVKDILKRFDVPVIFITAFPERLLTGERPEPTFLITKPFQPETVKAAISQALFFHPS 257

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI00167665F4	4.370e-121	71.76	response regulator n=1 Tax=Litorimonas cladophorae...	[more]
A0A848V2Q5_9PROT	6.960e-120	72.37	Response regulator n=1 Tax=Hellea sp. TaxID=271569...	[more]
UPI0003FD6F41	8.080e-119	71.98	response regulator n=1 Tax=Hellea balneolensis Tax...	[more]
UPI000379715B	1.690e-118	71.37	response regulator n=1 Tax=Robiginitomaculum antar...	[more]
A0A8J3CP60_9PROT	2.270e-116	70.43	Response regulator n=1 Tax=Algimonas arctica TaxID...	[more]
A0A420WEK5_9PROT	1.520e-114	68.36	Response regulator receiver domain-containing prot...	[more]
A0A520XTI4_9ACTN	3.670e-113	68.24	Response regulator n=2 Tax=Bacteria TaxID=2 RepID=...	[more]
A0A258H4X0_9PROT	9.310e-100	61.57	Response regulator n=4 Tax=Proteobacteria TaxID=12...	[more]
A0A7L5Z6Y3_9CAUL	1.190e-98	60.39	Response regulator n=1 Tax=Brevundimonas sp. TaxID...	[more]
A0A1R4F2S3_BREDI	2.400e-98	59.92	DNA-directed RNA polymerase specialized sigma subu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 138..248 e-value: 1.4E-11 score: 54.5
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 140..248 e-value: 6.7E-10 score: 39.1
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 139..252 score: 21.747
None	No IPR available	GENE3D	1.20.140.160		coord: 1..137 e-value: 1.4E-39 score: 137.2
None	No IPR available	GENE3D	3.40.50.2300		coord: 138..256 e-value: 8.6E-26 score: 92.3
None	No IPR available	PANTHER	PTHR43228	FAMILY NOT NAMED	coord: 139..252
None	No IPR available	PANTHER	PTHR43228:SF6		coord: 139..252
IPR013249	RNA polymerase sigma factor 70, region 4 type 2	PFAM	PF08281	Sigma70_r4_2	coord: 85..119 e-value: 3.4E-6 score: 26.6
IPR014605	Signal transduction response regulator PhyR-like, alphaproteobacteria	PIRSF	PIRSF036400	RR_Ctr_UCP036400	coord: 1..257 e-value: 3.6E-103 score: 342.5
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 138..252
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 87..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig100272	contig	P-canaliculata_contig100272:197..970 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig100272.80.1	mRNA_P-canaliculata_contig100272.80.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig100272 197..970 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig100272.80.1 ID=prot_P-canaliculata_contig100272.80.1|Name=mRNA_P-canaliculata_contig100272.80.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=258bp
MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSEL
PPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQ
SLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIA
ADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGID
AVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQ
ALFFHDS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR013249	RNA_pol_sigma70_r4_t2
IPR014605	Sig_resp-reg_PhyR
IPR011006	CheY-like_superfamily
IPR013324	RNA_pol_sigma_r3/r4-like